RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
CD40-205ENST00000477696 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 PLEKHF1Q96S99 279 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 CCDC87Q9NVE4 849 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 ADCY9O60503 1353 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 CEP350Q5VT06 3117 aa11.37□□□□□ -0.59
CD40-205ENST00000477696 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
CD40-205ENST00000477696 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
CD40-205ENST00000477696 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
CD40-205ENST00000477696 MCM10Q7L590 875 aa11.36□□□□□ -0.59
CD40-205ENST00000477696 TAF7Q15545 349 aaPredicted RBP11.35□□□□□ -0.59
CD40-205ENST00000477696 INTS5Q6P9B9 1019 aaKnown RBP11.35□□□□□ -0.59
CD40-205ENST00000477696 SMIM5Q71RC9 77 aa11.35□□□□□ -0.59
CD40-205ENST00000477696 PNISRQ8TF01 805 aaKnown RBP11.35□□□□□ -0.59
CD40-205ENST00000477696 ZNF496Q96IT1 587 aaPredicted RBP11.35□□□□□ -0.59
CD40-205ENST00000477696 DLEC1Q9Y238 1755 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 A0A087WZG4 1122 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 GRIN3BO60391 1043 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 ZPR1O75312 459 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 LMOD3Q0VAK6 560 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
CD40-205ENST00000477696 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
CD40-205ENST00000477696 PXDNLA1KZ92 1463 aa11.33□□□□□ -0.6
CD40-205ENST00000477696 MMP10P09238 476 aa11.33□□□□□ -0.6
CD40-205ENST00000477696 NPM2Q86SE8 214 aaKnown RBP11.33□□□□□ -0.6
CD40-205ENST00000477696 SOS1Q07889 1333 aaPredicted RBP11.33□□□□□ -0.6
CD40-205ENST00000477696 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
CD40-205ENST00000477696 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
CD40-205ENST00000477696 GYS1P13807 737 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 RIPK4P57078 832 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 DCTN1Q14203 1278 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
CD40-205ENST00000477696 RUNDC1Q96C34 613 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 ATP10DQ9P241 1426 aa11.32□□□□□ -0.6
CD40-205ENST00000477696 USP42Q9H9J4 1324 aaKnown RBP11.32□□□□□ -0.6
CD40-205ENST00000477696 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
CD40-205ENST00000477696 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
CD40-205ENST00000477696 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
CD40-205ENST00000477696 COL15A1P39059 1388 aa11.3□□□□□ -0.6
CD40-205ENST00000477696 ANP32CO43423 234 aa11.3□□□□□ -0.6
CD40-205ENST00000477696 KCNQ3O43525 872 aa11.3□□□□□ -0.6
CD40-205ENST00000477696 IL6STP40189 918 aaPredicted RBP11.3□□□□□ -0.6
CD40-205ENST00000477696 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
CD40-205ENST00000477696 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
CD40-205ENST00000477696 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
CD40-205ENST00000477696 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
CD40-205ENST00000477696 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
CD40-205ENST00000477696 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
CD40-205ENST00000477696 FKBP8Q14318 412 aa11.29□□□□□ -0.6
CD40-205ENST00000477696 USPL1Q5W0Q7 1092 aa11.29□□□□□ -0.6
CD40-205ENST00000477696 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
CD40-205ENST00000477696 SBF1O95248 1867 aa11.28□□□□□ -0.6
CD40-205ENST00000477696 TGFB2P61812 414 aa11.28□□□□□ -0.6
CD40-205ENST00000477696 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
CD40-205ENST00000477696 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
CD40-205ENST00000477696 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
CD40-205ENST00000477696 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
CD40-205ENST00000477696 A1BGP04217 495 aa11.27□□□□□ -0.61
CD40-205ENST00000477696 TM4SF1P30408 202 aa11.27□□□□□ -0.61
CD40-205ENST00000477696 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
CD40-205ENST00000477696 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
CD40-205ENST00000477696 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
CD40-205ENST00000477696 THUMPD2Q9BTF0 503 aaKnown RBP11.26□□□□□ -0.61
CD40-205ENST00000477696 TSPYL4Q9UJ04 414 aa11.26□□□□□ -0.61
CD40-205ENST00000477696 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
CD40-205ENST00000477696 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
CD40-205ENST00000477696 EIF4A1P60842 406 aaKnown RBP11.25□□□□□ -0.61
CD40-205ENST00000477696 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
CD40-205ENST00000477696 DDR1Q08345 913 aa11.25□□□□□ -0.61
CD40-205ENST00000477696 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
CD40-205ENST00000477696 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
CD40-205ENST00000477696 PRAMEF22A3QJZ6 481 aa11.24□□□□□ -0.61
CD40-205ENST00000477696 POLRMTO00411 1230 aaKnown RBP11.24□□□□□ -0.61
CD40-205ENST00000477696 RGL2O15211 777 aa11.24□□□□□ -0.61
CD40-205ENST00000477696 NFIXQ14938 502 aa11.24□□□□□ -0.61
CD40-205ENST00000477696 CLEC4GQ6UXB4 293 aa11.24□□□□□ -0.61
CD40-205ENST00000477696 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
CD40-205ENST00000477696 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
CD40-205ENST00000477696 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
CD40-205ENST00000477696 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 ARFGEF2Q9Y6D5 1785 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 SERPINB2P05120 415 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 SETDB2Q96T68 719 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
CD40-205ENST00000477696 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
CD40-205ENST00000477696 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 CHL1O00533 1208 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 APAF1O14727 1248 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 CCDC88AQ3V6T2 1871 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
CD40-205ENST00000477696 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms