RNA–Protein interactions for RNA: ENST00000477448.1

SOBP-202, Transcript of sine oculis binding protein homolog, humanhuman

TSL 5

Gene SOBP, Length 1,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-202ENST00000477448 SMARCC1Q92922 1105 aaPredicted RBP33.26■■■□□ 2.91
SOBP-202ENST00000477448 BCL2L13Q9BXK5 485 aa33.26■■■□□ 2.91
SOBP-202ENST00000477448 HOXB7P09629 217 aa33.25■■■□□ 2.91
SOBP-202ENST00000477448 ZNF496Q96IT1 587 aaPredicted RBP33.25■■■□□ 2.91
SOBP-202ENST00000477448 ATG3Q9NT62 314 aa33.25■■■□□ 2.91
SOBP-202ENST00000477448 SMC4Q9NTJ3 1288 aa33.24■■■□□ 2.91
SOBP-202ENST00000477448 LAMB4A4D0S4 1761 aa33.24■■■□□ 2.91
SOBP-202ENST00000477448 CASZ1Q86V15 1759 aa33.24■■■□□ 2.91
SOBP-202ENST00000477448 GIGYF1O75420 1035 aaPredicted RBP33.23■■■□□ 2.91
SOBP-202ENST00000477448 FMNL2Q96PY5 1086 aa33.23■■■□□ 2.91
SOBP-202ENST00000477448 ATF5Q9Y2D1 282 aaPredicted RBP33.22■■■□□ 2.91
SOBP-202ENST00000477448 SPON1Q9HCB6 807 aa33.21■■■□□ 2.91
SOBP-202ENST00000477448 TFCP2L1Q9NZI6 479 aa33.21■■■□□ 2.91
SOBP-202ENST00000477448 LOC102724428A0A0B4J2F2 783 aa33.19■■■□□ 2.9
SOBP-202ENST00000477448 BRPF1P55201 1214 aaPredicted RBP33.19■■■□□ 2.9
SOBP-202ENST00000477448 SIK1P57059 783 aa33.19■■■□□ 2.9
SOBP-202ENST00000477448 TCERG1O14776 1098 aaKnown RBP33.18■■■□□ 2.9
SOBP-202ENST00000477448 MRPL50Q8N5N7 158 aaKnown RBP33.18■■■□□ 2.9
SOBP-202ENST00000477448 PLIN1O60240 522 aa33.18■■■□□ 2.9
SOBP-202ENST00000477448 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.18■■■□□ 2.9
SOBP-202ENST00000477448 PNPLA7Q6ZV29 1317 aa33.17■■■□□ 2.9
SOBP-202ENST00000477448 PRAMEF22A3QJZ6 481 aa33.17■■■□□ 2.9
SOBP-202ENST00000477448 SNRPA1P09661 255 aaKnown RBP33.16■■■□□ 2.9
SOBP-202ENST00000477448 HDGFL1Q5TGJ6 251 aa33.16■■■□□ 2.9
SOBP-202ENST00000477448 CCDC30Q5VVM6 783 aa33.16■■■□□ 2.9
SOBP-202ENST00000477448 KIF16BQ96L93 1317 aa33.15■■■□□ 2.9
SOBP-202ENST00000477448 PTCD1O75127 700 aaKnown RBP33.14■■■□□ 2.9
SOBP-202ENST00000477448 ITPK1Q13572 414 aa33.14■■■□□ 2.9
SOBP-202ENST00000477448 SLC4A9Q96Q91 983 aa33.14■■■□□ 2.9
SOBP-202ENST00000477448 CHMP4AQ9BY43 222 aa33.14■■■□□ 2.9
SOBP-202ENST00000477448 EIF2S2P20042 333 aaKnown RBP33.13■■■□□ 2.89
SOBP-202ENST00000477448 ATP6V1AP38606 617 aa33.13■■■□□ 2.89
SOBP-202ENST00000477448 LINC00116Q8NCU8 138 aa33.13■■■□□ 2.89
SOBP-202ENST00000477448 NECTIN2Q92692 538 aa33.13■■■□□ 2.89
SOBP-202ENST00000477448 RBM42Q9BTD8 480 aaKnown RBP33.13■■■□□ 2.89
SOBP-202ENST00000477448 NEFLP07196 543 aa33.12■■■□□ 2.89
SOBP-202ENST00000477448 SMIM5Q71RC9 77 aa33.12■■■□□ 2.89
SOBP-202ENST00000477448 FRAT1Q92837 279 aaPredicted RBP33.12■■■□□ 2.89
SOBP-202ENST00000477448 TUBGCP6Q96RT7 1819 aa33.12■■■□□ 2.89
SOBP-202ENST00000477448 TAF1LQ8IZX4 1826 aa33.12■■■□□ 2.89
SOBP-202ENST00000477448 PTGER2P43116 358 aa33.11■■■□□ 2.89
SOBP-202ENST00000477448 STK31Q9BXU1 1019 aa33.11■■■□□ 2.89
SOBP-202ENST00000477448 TJP1Q07157 1748 aa33.1■■■□□ 2.89
SOBP-202ENST00000477448 CANXP27824 592 aaKnown RBP33.1■■■□□ 2.89
SOBP-202ENST00000477448 AMIGO3Q86WK7 504 aa33.1■■■□□ 2.89
SOBP-202ENST00000477448 MTFR1LQ9H019 292 aa33.1■■■□□ 2.89
SOBP-202ENST00000477448 NOB1Q9ULX3 412 aaKnown RBP33.1■■■□□ 2.89
SOBP-202ENST00000477448 CICQ96RK0 1608 aaPredicted RBP33.09■■■□□ 2.89
SOBP-202ENST00000477448 SLC4A2P04920 1241 aa33.09■■■□□ 2.89
SOBP-202ENST00000477448 IRX6P78412 446 aaPredicted RBP33.09■■■□□ 2.89
SOBP-202ENST00000477448 COL23A1Q86Y22 540 aaPredicted RBP33.09■■■□□ 2.89
SOBP-202ENST00000477448 VSIG10Q8N0Z9 540 aa33.09■■■□□ 2.89
SOBP-202ENST00000477448 USP16Q9Y5T5 823 aa33.08■■■□□ 2.89
SOBP-202ENST00000477448 ZKSCAN2Q63HK3 967 aa33.07■■■□□ 2.89
SOBP-202ENST00000477448 PPP1R1BQ9UD71 204 aaPredicted RBP33.07■■■□□ 2.89
SOBP-202ENST00000477448 ZNF831Q5JPB2 1677 aa33.07■■■□□ 2.89
SOBP-202ENST00000477448 C4BP0C0L5 1744 aa33.06■■■□□ 2.88
SOBP-202ENST00000477448 MSH5O43196 834 aa33.06■■■□□ 2.88
SOBP-202ENST00000477448 CHPF2Q9P2E5 772 aa33.06■■■□□ 2.88
SOBP-202ENST00000477448 IPO8O15397 1037 aaKnown RBP33.05■■■□□ 2.88
SOBP-202ENST00000477448 C20orf194Q5TEA3 1177 aa33.05■■■□□ 2.88
SOBP-202ENST00000477448 AK7Q96M32 723 aa33.05■■■□□ 2.88
SOBP-202ENST00000477448 QSER1Q2KHR3 1735 aa33.04■■■□□ 2.88
SOBP-202ENST00000477448 ATF7IPQ6VMQ6 1270 aa33.04■■■□□ 2.88
SOBP-202ENST00000477448 ARHGAP45Q92619 1136 aa33.04■■■□□ 2.88
SOBP-202ENST00000477448 SGIP1Q9BQI5 828 aa33.04■■■□□ 2.88
SOBP-202ENST00000477448 DBF4Q9UBU7 674 aaPredicted RBP33.04■■■□□ 2.88
SOBP-202ENST00000477448 FKBP8Q14318 412 aa33.03■■■□□ 2.88
SOBP-202ENST00000477448 GTF3C3Q9Y5Q9 886 aa33.03■■■□□ 2.88
SOBP-202ENST00000477448 TRIM27P14373 513 aa33.02■■■□□ 2.88
SOBP-202ENST00000477448 TNNQ9UQP3 1299 aa33.02■■■□□ 2.88
SOBP-202ENST00000477448 PHF14O94880 888 aa33.02■■■□□ 2.88
SOBP-202ENST00000477448 PDE3AQ14432 1141 aa33.02■■■□□ 2.88
SOBP-202ENST00000477448 G2E3Q7L622 706 aa33.02■■■□□ 2.88
SOBP-202ENST00000477448 TEX13AQ9BXU3 409 aaPredicted RBP33.02■■■□□ 2.88
SOBP-202ENST00000477448 SLC16A10Q8TF71 515 aa33.01■■■□□ 2.87
SOBP-202ENST00000477448 PTPRCP08575 1304 aa33■■■□□ 2.87
SOBP-202ENST00000477448 PDIA6Q15084 440 aa33■■■□□ 2.87
SOBP-202ENST00000477448 DNAJC10Q8IXB1 793 aa33■■■□□ 2.87
SOBP-202ENST00000477448 DDX21Q9NR30 783 aaKnown RBP eCLIP33■■■□□ 2.87
SOBP-202ENST00000477448 COL5A3P25940 1745 aaPredicted RBP32.99■■■□□ 2.87
SOBP-202ENST00000477448 HMGB2P26583 209 aaKnown RBP32.99■■■□□ 2.87
SOBP-202ENST00000477448 ERBB4Q15303 1308 aa32.99■■■□□ 2.87
SOBP-202ENST00000477448 ANXA1P04083 346 aa32.98■■■□□ 2.87
SOBP-202ENST00000477448 PROSER3Q2NL68 480 aa32.98■■■□□ 2.87
SOBP-202ENST00000477448 GNPATO15228 680 aa32.97■■■□□ 2.87
SOBP-202ENST00000477448 FLIIQ13045 1269 aa32.97■■■□□ 2.87
SOBP-202ENST00000477448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.97■■■□□ 2.87
SOBP-202ENST00000477448 MS4A1P11836 297 aa32.97■■■□□ 2.87
SOBP-202ENST00000477448 MSL1Q68DK7 614 aa32.97■■■□□ 2.87
SOBP-202ENST00000477448 DZIP1LQ8IYY4 767 aaKnown RBP32.97■■■□□ 2.87
SOBP-202ENST00000477448 CLUAP1Q96AJ1 413 aa32.97■■■□□ 2.87
SOBP-202ENST00000477448 API5Q9BZZ5 524 aaKnown RBP32.97■■■□□ 2.87
SOBP-202ENST00000477448 PHAXQ9H814 394 aaKnown RBP32.97■■■□□ 2.87
SOBP-202ENST00000477448 RLBP1P12271 317 aa32.96■■■□□ 2.87
SOBP-202ENST00000477448 PANK1Q8TE04 598 aa32.96■■■□□ 2.87
SOBP-202ENST00000477448 HYPKQ9NX55 129 aa32.96■■■□□ 2.87
SOBP-202ENST00000477448 UBR3Q6ZT12 1888 aa32.95■■■□□ 2.86
SOBP-202ENST00000477448 FTSJ3Q8IY81 847 aaKnown RBP32.94■■■□□ 2.86
SOBP-202ENST00000477448 FLAD1Q8NFF5 587 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms