RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 DCTN1Q14203 1278 aa14.88□□□□□ -0.03
PTPRN-213ENST00000476930 PARP3Q9Y6F1 533 aa14.88□□□□□ -0.03
PTPRN-213ENST00000476930 PXDNLA1KZ92 1463 aa14.88□□□□□ -0.03
PTPRN-213ENST00000476930 COL15A1P39059 1388 aa14.87□□□□□ -0.03
PTPRN-213ENST00000476930 C10orf71Q711Q0 1435 aa14.87□□□□□ -0.03
PTPRN-213ENST00000476930 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
PTPRN-213ENST00000476930 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
PTPRN-213ENST00000476930 DDR1Q08345 913 aa14.87□□□□□ -0.03
PTPRN-213ENST00000476930 USPL1Q5W0Q7 1092 aa14.87□□□□□ -0.03
PTPRN-213ENST00000476930 A0A0G2JLW4 131 aa14.86□□□□□ -0.03
PTPRN-213ENST00000476930 ZPR1O75312 459 aa14.86□□□□□ -0.03
PTPRN-213ENST00000476930 RTF1Q92541 710 aaKnown RBP14.86□□□□□ -0.03
PTPRN-213ENST00000476930 ARFGEF1Q9Y6D6 1849 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 STARD3NLO95772 234 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 TM4SF1P30408 202 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 FMNL2Q96PY5 1086 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 BCL2L12Q9HB09 334 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 NARFQ9UHQ1 456 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 KDM3BQ7LBC6 1761 aa14.85□□□□□ -0.03
PTPRN-213ENST00000476930 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
PTPRN-213ENST00000476930 EIF5P55010 431 aaKnown RBP14.84□□□□□ -0.03
PTPRN-213ENST00000476930 TGFB2P61812 414 aa14.84□□□□□ -0.03
PTPRN-213ENST00000476930 RALBP1Q15311 655 aa14.84□□□□□ -0.03
PTPRN-213ENST00000476930 PRAMEF22A3QJZ6 481 aa14.83□□□□□ -0.04
PTPRN-213ENST00000476930 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
PTPRN-213ENST00000476930 HTATSF1O43719 755 aaKnown RBP14.83□□□□□ -0.04
PTPRN-213ENST00000476930 A1BGP04217 495 aa14.83□□□□□ -0.04
PTPRN-213ENST00000476930 DPEP1P16444 411 aa14.83□□□□□ -0.04
PTPRN-213ENST00000476930 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
PTPRN-213ENST00000476930 SCN7AQ01118 1682 aa14.83□□□□□ -0.04
PTPRN-213ENST00000476930 NFIXQ14938 502 aa14.82□□□□□ -0.04
PTPRN-213ENST00000476930 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
PTPRN-213ENST00000476930 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
PTPRN-213ENST00000476930 BCORQ6W2J9 1755 aa14.82□□□□□ -0.04
PTPRN-213ENST00000476930 LAMB4A4D0S4 1761 aa14.81□□□□□ -0.04
PTPRN-213ENST00000476930 ANKRD31Q8N7Z5 1873 aa14.81□□□□□ -0.04
PTPRN-213ENST00000476930 KCNA3P22001 575 aa14.81□□□□□ -0.04
PTPRN-213ENST00000476930 PIP4K2AP48426 406 aaPredicted RBP14.81□□□□□ -0.04
PTPRN-213ENST00000476930 TBC1D2BQ9UPU7 963 aa14.81□□□□□ -0.04
PTPRN-213ENST00000476930 ZNF330Q9Y3S2 320 aaPredicted RBP14.81□□□□□ -0.04
PTPRN-213ENST00000476930 DLEC1Q9Y238 1755 aa14.8□□□□□ -0.04
PTPRN-213ENST00000476930 NEFMP07197 916 aa14.8□□□□□ -0.04
PTPRN-213ENST00000476930 IL6STP40189 918 aaPredicted RBP14.8□□□□□ -0.04
PTPRN-213ENST00000476930 TAF7Q15545 349 aaPredicted RBP14.8□□□□□ -0.04
PTPRN-213ENST00000476930 NFE2L2Q16236 605 aa14.8□□□□□ -0.04
PTPRN-213ENST00000476930 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
PTPRN-213ENST00000476930 BCS1LQ9Y276 419 aa14.8□□□□□ -0.04
PTPRN-213ENST00000476930 SBF1O95248 1867 aa14.8□□□□□ -0.04
PTPRN-213ENST00000476930 A0A087WZG4 1122 aa14.79□□□□□ -0.04
PTPRN-213ENST00000476930 CHRNA5P30532 468 aa14.79□□□□□ -0.04
PTPRN-213ENST00000476930 CCDC88AQ3V6T2 1871 aa14.79□□□□□ -0.04
PTPRN-213ENST00000476930 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
PTPRN-213ENST00000476930 MAPK8IP3Q9UPT6 1336 aa14.78□□□□□ -0.04
PTPRN-213ENST00000476930 SERPINB2P05120 415 aa14.78□□□□□ -0.04
PTPRN-213ENST00000476930 SNRPA1P09661 255 aaKnown RBP14.78□□□□□ -0.04
PTPRN-213ENST00000476930 BICDL1Q6ZP65 573 aa14.78□□□□□ -0.04
PTPRN-213ENST00000476930 CACNA1SQ13698 1873 aa14.78□□□□□ -0.04
PTPRN-213ENST00000476930 TBC1D9BQ66K14 1250 aa14.77□□□□□ -0.05
PTPRN-213ENST00000476930 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
PTPRN-213ENST00000476930 NUP98P52948 1817 aa14.77□□□□□ -0.05
PTPRN-213ENST00000476930 ATP10DQ9P241 1426 aa14.76□□□□□ -0.05
PTPRN-213ENST00000476930 CARMIL3Q8ND23 1372 aa14.76□□□□□ -0.05
PTPRN-213ENST00000476930 PIM2Q9P1W9 311 aa14.76□□□□□ -0.05
PTPRN-213ENST00000476930 ADCY9O60503 1353 aa14.75□□□□□ -0.05
PTPRN-213ENST00000476930 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
PTPRN-213ENST00000476930 CAMTA2O94983 1202 aa14.75□□□□□ -0.05
PTPRN-213ENST00000476930 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
PTPRN-213ENST00000476930 ARHGAP27Q6ZUM4 889 aa14.75□□□□□ -0.05
PTPRN-213ENST00000476930 DZIP3Q86Y13 1208 aaKnown RBP14.75□□□□□ -0.05
PTPRN-213ENST00000476930 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
PTPRN-213ENST00000476930 COL11A2P13942 1736 aaPredicted RBP14.75□□□□□ -0.05
PTPRN-213ENST00000476930 RIPK4P57078 832 aa14.74□□□□□ -0.05
PTPRN-213ENST00000476930 DALRD3Q5D0E6 543 aaKnown RBP14.74□□□□□ -0.05
PTPRN-213ENST00000476930 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
PTPRN-213ENST00000476930 CCDC146Q8IYE0 955 aa14.74□□□□□ -0.05
PTPRN-213ENST00000476930 CCDC24Q8N4L8 307 aa14.74□□□□□ -0.05
PTPRN-213ENST00000476930 PRKRIP1Q9H875 184 aaPredicted RBP14.74□□□□□ -0.05
PTPRN-213ENST00000476930 TMPOP42166 694 aaKnown RBP14.73□□□□□ -0.05
PTPRN-213ENST00000476930 EIF4A1P60842 406 aaKnown RBP14.73□□□□□ -0.05
PTPRN-213ENST00000476930 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
PTPRN-213ENST00000476930 ZNF526Q8TF50 670 aaPredicted RBP14.73□□□□□ -0.05
PTPRN-213ENST00000476930 RRP7AQ9Y3A4 280 aaKnown RBP14.73□□□□□ -0.05
PTPRN-213ENST00000476930 CEP350Q5VT06 3117 aa14.73□□□□□ -0.05
PTPRN-213ENST00000476930 GIGYF1O75420 1035 aaPredicted RBP14.72□□□□□ -0.05
PTPRN-213ENST00000476930 NEUROD2Q15784 382 aa14.71□□□□□ -0.05
PTPRN-213ENST00000476930 PRR5LQ6MZQ0 368 aa14.71□□□□□ -0.05
PTPRN-213ENST00000476930 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.05
PTPRN-213ENST00000476930 SETDB2Q96T68 719 aa14.71□□□□□ -0.05
PTPRN-213ENST00000476930 ADAMTS8Q9UP79 889 aa14.71□□□□□ -0.05
PTPRN-213ENST00000476930 C1QTNF8P60827 252 aa14.7□□□□□ -0.06
PTPRN-213ENST00000476930 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
PTPRN-213ENST00000476930 SLX4Q8IY92 1834 aa14.7□□□□□ -0.06
PTPRN-213ENST00000476930 H0YIN7 160 aa14.69□□□□□ -0.06
PTPRN-213ENST00000476930 NGEFQ8N5V2 710 aa14.69□□□□□ -0.06
PTPRN-213ENST00000476930 GPBP1L1Q9HC44 474 aaPredicted RBP14.69□□□□□ -0.06
PTPRN-213ENST00000476930 TSPYL4Q9UJ04 414 aa14.69□□□□□ -0.06
PTPRN-213ENST00000476930 ARFGEF2Q9Y6D5 1785 aa14.68□□□□□ -0.06
PTPRN-213ENST00000476930 FER1L6Q2WGJ9 1857 aa14.68□□□□□ -0.06
PTPRN-213ENST00000476930 HLFQ16534 295 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms