RNA–Protein interactions for RNA: ENST00000476759.3

RN7SL253P-201, Transcript of RNA, 7SL, cytoplasmic 253, pseudogene, humanhuman

BASIC

Gene RN7SL253P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL253P-201ENST00000476759 NEFLP07196 543 aa13.1□□□□□ -0.31
RN7SL253P-201ENST00000476759 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
RN7SL253P-201ENST00000476759 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
RN7SL253P-201ENST00000476759 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
RN7SL253P-201ENST00000476759 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
RN7SL253P-201ENST00000476759 EP400Q96L91 3159 aa13.1□□□□□ -0.31
RN7SL253P-201ENST00000476759 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 MS4A1P11836 297 aa13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 DNAJC10Q8IXB1 793 aa13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 TNS1Q9HBL0 1735 aaKnown RBP13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
RN7SL253P-201ENST00000476759 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
RN7SL253P-201ENST00000476759 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.32
RN7SL253P-201ENST00000476759 NOB1Q9ULX3 412 aaKnown RBP13.08□□□□□ -0.32
RN7SL253P-201ENST00000476759 PTPRCP08575 1304 aa13.08□□□□□ -0.32
RN7SL253P-201ENST00000476759 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
RN7SL253P-201ENST00000476759 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
RN7SL253P-201ENST00000476759 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
RN7SL253P-201ENST00000476759 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
RN7SL253P-201ENST00000476759 PLSCR1O15162 318 aa13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 PLIN1O60240 522 aa13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 APBA3O96018 575 aa13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 FLIIQ13045 1269 aa13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
RN7SL253P-201ENST00000476759 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 A1BGP04217 495 aa13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 MYL6BP14649 208 aa13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 ITPK1Q13572 414 aa13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 PDIA6Q15084 440 aa13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 RREB1Q92766 1687 aa13.05□□□□□ -0.32
RN7SL253P-201ENST00000476759 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 ANXA1P04083 346 aa13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 G2E3Q7L622 706 aa13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 CCDC87Q9NVE4 849 aa13.04□□□□□ -0.32
RN7SL253P-201ENST00000476759 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 TRIM27P14373 513 aa13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 NBPF14Q5TI25 921 aa13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
RN7SL253P-201ENST00000476759 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
RN7SL253P-201ENST00000476759 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 PIP4K2AP48426 406 aaPredicted RBP13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 CLUAP1Q96AJ1 413 aa13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 N4BP2Q86UW6 1770 aaPredicted RBP13.02□□□□□ -0.33
RN7SL253P-201ENST00000476759 BAG6P46379 1132 aa13.01□□□□□ -0.33
RN7SL253P-201ENST00000476759 KCNQ4P56696 695 aa13.01□□□□□ -0.33
RN7SL253P-201ENST00000476759 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
RN7SL253P-201ENST00000476759 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
RN7SL253P-201ENST00000476759 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
RN7SL253P-201ENST00000476759 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
RN7SL253P-201ENST00000476759 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 ABCC4O15439 1325 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 A0A087WZG4 1122 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 IRX6P78412 446 aaPredicted RBP13□□□□□ -0.33
RN7SL253P-201ENST00000476759 KSR2Q6VAB6 950 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 PANK1Q8TE04 598 aa13□□□□□ -0.33
RN7SL253P-201ENST00000476759 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 C20orf194Q5TEA3 1177 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 AK7Q96M32 723 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 LRRC4BQ9NT99 713 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 NUP188Q5SRE5 1749 aa12.99□□□□□ -0.33
RN7SL253P-201ENST00000476759 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 NUP98P52948 1817 aa12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 F6X3S4 739 aa12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 CCT4P50991 539 aaKnown RBP12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 NEXNQ0ZGT2 675 aa12.98□□□□□ -0.33
RN7SL253P-201ENST00000476759 FKBP8Q14318 412 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms