RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 COL15A1P39059 1388 aa17.95■□□□□ 0.46
HMGCS2-203ENST00000476640 STARD3NLO95772 234 aa17.95■□□□□ 0.46
HMGCS2-203ENST00000476640 ARHGAP27Q6ZUM4 889 aa17.95■□□□□ 0.46
HMGCS2-203ENST00000476640 DDR1Q08345 913 aa17.94■□□□□ 0.46
HMGCS2-203ENST00000476640 USPL1Q5W0Q7 1092 aa17.94■□□□□ 0.46
HMGCS2-203ENST00000476640 NARFQ9UHQ1 456 aa17.94■□□□□ 0.46
HMGCS2-203ENST00000476640 NUDCQ9Y266 331 aa17.94■□□□□ 0.46
HMGCS2-203ENST00000476640 NRXN2Q9P2S2 1712 aa17.93■□□□□ 0.46
HMGCS2-203ENST00000476640 TM4SF1P30408 202 aa17.93■□□□□ 0.46
HMGCS2-203ENST00000476640 DALRD3Q5D0E6 543 aaKnown RBP17.93■□□□□ 0.46
HMGCS2-203ENST00000476640 TEX13AQ9BXU3 409 aaPredicted RBP17.93■□□□□ 0.46
HMGCS2-203ENST00000476640 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
HMGCS2-203ENST00000476640 A0A087WZG4 1122 aa17.92■□□□□ 0.46
HMGCS2-203ENST00000476640 POLRMTO00411 1230 aaKnown RBP17.92■□□□□ 0.46
HMGCS2-203ENST00000476640 ZBTB1Q9Y2K1 713 aa17.92■□□□□ 0.46
HMGCS2-203ENST00000476640 SBF1O95248 1867 aa17.91■□□□□ 0.46
HMGCS2-203ENST00000476640 KCNA3P22001 575 aa17.91■□□□□ 0.46
HMGCS2-203ENST00000476640 ZNF790Q6PG37 636 aa17.91■□□□□ 0.46
HMGCS2-203ENST00000476640 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
HMGCS2-203ENST00000476640 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
HMGCS2-203ENST00000476640 NFIXQ14938 502 aa17.89■□□□□ 0.45
HMGCS2-203ENST00000476640 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
HMGCS2-203ENST00000476640 IL17REQ8NFR9 667 aa17.89■□□□□ 0.45
HMGCS2-203ENST00000476640 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
HMGCS2-203ENST00000476640 PRKAR2BP31323 418 aa17.88■□□□□ 0.45
HMGCS2-203ENST00000476640 ZNF496Q96IT1 587 aaPredicted RBP17.88■□□□□ 0.45
HMGCS2-203ENST00000476640 FMNL2Q96PY5 1086 aa17.88■□□□□ 0.45
HMGCS2-203ENST00000476640 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
HMGCS2-203ENST00000476640 HSPA6P17066 643 aa17.87■□□□□ 0.45
HMGCS2-203ENST00000476640 CHRNA5P30532 468 aa17.87■□□□□ 0.45
HMGCS2-203ENST00000476640 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
HMGCS2-203ENST00000476640 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
HMGCS2-203ENST00000476640 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
HMGCS2-203ENST00000476640 SERPINB2P05120 415 aa17.86■□□□□ 0.45
HMGCS2-203ENST00000476640 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
HMGCS2-203ENST00000476640 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.45
HMGCS2-203ENST00000476640 C9orf131Q5VYM1 1079 aa17.86■□□□□ 0.45
HMGCS2-203ENST00000476640 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
HMGCS2-203ENST00000476640 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
HMGCS2-203ENST00000476640 KIF3CO14782 793 aa17.85■□□□□ 0.45
HMGCS2-203ENST00000476640 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
HMGCS2-203ENST00000476640 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
HMGCS2-203ENST00000476640 TNRC6CQ9HCJ0 1690 aaKnown RBP17.84■□□□□ 0.45
HMGCS2-203ENST00000476640 CEP350Q5VT06 3117 aa17.84■□□□□ 0.45
HMGCS2-203ENST00000476640 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
HMGCS2-203ENST00000476640 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
HMGCS2-203ENST00000476640 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
HMGCS2-203ENST00000476640 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
HMGCS2-203ENST00000476640 KDM2BQ8NHM5 1336 aa17.83■□□□□ 0.44
HMGCS2-203ENST00000476640 H0YIN7 160 aa17.83■□□□□ 0.44
HMGCS2-203ENST00000476640 TOMM70O94826 608 aa17.83■□□□□ 0.44
HMGCS2-203ENST00000476640 RNF181Q9P0P0 153 aa17.83■□□□□ 0.44
HMGCS2-203ENST00000476640 PDZRN3Q9UPQ7 1066 aa17.83■□□□□ 0.44
HMGCS2-203ENST00000476640 ANKRD31Q8N7Z5 1873 aa17.83■□□□□ 0.44
HMGCS2-203ENST00000476640 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
HMGCS2-203ENST00000476640 NEFMP07197 916 aa17.82■□□□□ 0.44
HMGCS2-203ENST00000476640 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
HMGCS2-203ENST00000476640 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
HMGCS2-203ENST00000476640 HTATSF1O43719 755 aaKnown RBP17.81■□□□□ 0.44
HMGCS2-203ENST00000476640 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
HMGCS2-203ENST00000476640 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
HMGCS2-203ENST00000476640 TTLL6Q8N841 843 aa17.81■□□□□ 0.44
HMGCS2-203ENST00000476640 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
HMGCS2-203ENST00000476640 PDE6BP35913 854 aa17.8■□□□□ 0.44
HMGCS2-203ENST00000476640 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
HMGCS2-203ENST00000476640 TIAM2Q8IVF5 1701 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 NPHP1O15259 732 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 A1BGP04217 495 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 SETDB2Q96T68 719 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 CACNA1SQ13698 1873 aa17.79■□□□□ 0.44
HMGCS2-203ENST00000476640 DICER1Q9UPY3 1922 aaKnown RBP17.78■□□□□ 0.44
HMGCS2-203ENST00000476640 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
HMGCS2-203ENST00000476640 APLP1P51693 650 aa17.78■□□□□ 0.44
HMGCS2-203ENST00000476640 BRIP1Q9BX63 1249 aa17.78■□□□□ 0.44
HMGCS2-203ENST00000476640 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
HMGCS2-203ENST00000476640 ARFGEF2Q9Y6D5 1785 aa17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 LMNB1P20700 586 aa17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 MCM10Q7L590 875 aa17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 RBM46Q8TBY0 533 aaKnown RBP17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 COL11A2P13942 1736 aaPredicted RBP17.77■□□□□ 0.44
HMGCS2-203ENST00000476640 FER1L6Q2WGJ9 1857 aa17.76■□□□□ 0.43
HMGCS2-203ENST00000476640 KCNQ3O43525 872 aa17.76■□□□□ 0.43
HMGCS2-203ENST00000476640 ST5P78524 1137 aa17.76■□□□□ 0.43
HMGCS2-203ENST00000476640 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
HMGCS2-203ENST00000476640 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
HMGCS2-203ENST00000476640 PRR5LQ6MZQ0 368 aa17.75■□□□□ 0.43
HMGCS2-203ENST00000476640 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.43
HMGCS2-203ENST00000476640 PNNQ9H307 717 aaKnown RBP17.75■□□□□ 0.43
HMGCS2-203ENST00000476640 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
HMGCS2-203ENST00000476640 RASSF7Q02833 373 aa17.74■□□□□ 0.43
HMGCS2-203ENST00000476640 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
HMGCS2-203ENST00000476640 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
HMGCS2-203ENST00000476640 USP16Q9Y5T5 823 aa17.74■□□□□ 0.43
HMGCS2-203ENST00000476640 WDR90Q96KV7 1748 aa17.74■□□□□ 0.43
HMGCS2-203ENST00000476640 RGL2O15211 777 aa17.73■□□□□ 0.43
HMGCS2-203ENST00000476640 FSTL1Q12841 308 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms