RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 TTC5Q8N0Z6 440 aa18.79■□□□□ 0.6
SLC6A8-209ENST00000476466 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
SLC6A8-209ENST00000476466 BTBD11A6QL63 1104 aa18.78■□□□□ 0.6
SLC6A8-209ENST00000476466 THUMPD2Q9BTF0 503 aaKnown RBP18.78■□□□□ 0.6
SLC6A8-209ENST00000476466 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
SLC6A8-209ENST00000476466 CHD4Q14839 1912 aa18.77■□□□□ 0.6
SLC6A8-209ENST00000476466 NLGN1Q8N2Q7 840 aa18.77■□□□□ 0.6
SLC6A8-209ENST00000476466 N4BP2Q86UW6 1770 aaPredicted RBP18.77■□□□□ 0.6
SLC6A8-209ENST00000476466 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
SLC6A8-209ENST00000476466 KDM3BQ7LBC6 1761 aa18.76■□□□□ 0.59
SLC6A8-209ENST00000476466 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
SLC6A8-209ENST00000476466 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
SLC6A8-209ENST00000476466 MIS18AQ9NYP9 233 aa18.76■□□□□ 0.59
SLC6A8-209ENST00000476466 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
SLC6A8-209ENST00000476466 NFE2L2Q16236 605 aa18.75■□□□□ 0.59
SLC6A8-209ENST00000476466 RTF1Q92541 710 aaKnown RBP18.75■□□□□ 0.59
SLC6A8-209ENST00000476466 FMNL2Q96PY5 1086 aa18.75■□□□□ 0.59
SLC6A8-209ENST00000476466 PRKRIP1Q9H875 184 aaPredicted RBP18.75■□□□□ 0.59
SLC6A8-209ENST00000476466 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
SLC6A8-209ENST00000476466 A1BGP04217 495 aa18.74■□□□□ 0.59
SLC6A8-209ENST00000476466 PIP4K2AP48426 406 aaPredicted RBP18.74■□□□□ 0.59
SLC6A8-209ENST00000476466 POLRMTO00411 1230 aaKnown RBP18.73■□□□□ 0.59
SLC6A8-209ENST00000476466 NARFQ9UHQ1 456 aa18.73■□□□□ 0.59
SLC6A8-209ENST00000476466 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
SLC6A8-209ENST00000476466 BRCA1P38398 1863 aaKnown RBP18.73■□□□□ 0.59
SLC6A8-209ENST00000476466 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
SLC6A8-209ENST00000476466 NRXN2Q9P2S2 1712 aa18.72■□□□□ 0.59
SLC6A8-209ENST00000476466 STARD3NLO95772 234 aa18.72■□□□□ 0.59
SLC6A8-209ENST00000476466 TM4SF1P30408 202 aa18.72■□□□□ 0.59
SLC6A8-209ENST00000476466 NFIXQ14938 502 aa18.71■□□□□ 0.59
SLC6A8-209ENST00000476466 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
SLC6A8-209ENST00000476466 PARP3Q9Y6F1 533 aa18.71■□□□□ 0.59
SLC6A8-209ENST00000476466 LAMB4A4D0S4 1761 aa18.7■□□□□ 0.58
SLC6A8-209ENST00000476466 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
SLC6A8-209ENST00000476466 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
SLC6A8-209ENST00000476466 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 A0A0G2JLW4 131 aa18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 ZPR1O75312 459 aa18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 KCNA3P22001 575 aa18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 ZNF784Q8NCA9 323 aaPredicted RBP18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
SLC6A8-209ENST00000476466 DPEP1P16444 411 aa18.68■□□□□ 0.58
SLC6A8-209ENST00000476466 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
SLC6A8-209ENST00000476466 TBC1D2BQ9UPU7 963 aa18.68■□□□□ 0.58
SLC6A8-209ENST00000476466 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
SLC6A8-209ENST00000476466 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 SNRPA1P09661 255 aaKnown RBP18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 TEX13AQ9BXU3 409 aaPredicted RBP18.67■□□□□ 0.58
SLC6A8-209ENST00000476466 CAMTA2O94983 1202 aa18.66■□□□□ 0.58
SLC6A8-209ENST00000476466 NEFMP07197 916 aa18.66■□□□□ 0.58
SLC6A8-209ENST00000476466 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
SLC6A8-209ENST00000476466 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
SLC6A8-209ENST00000476466 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
SLC6A8-209ENST00000476466 RIPK4P57078 832 aa18.65■□□□□ 0.58
SLC6A8-209ENST00000476466 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
SLC6A8-209ENST00000476466 TGFB2P61812 414 aa18.65■□□□□ 0.58
SLC6A8-209ENST00000476466 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
SLC6A8-209ENST00000476466 CHRNA5P30532 468 aa18.64■□□□□ 0.57
SLC6A8-209ENST00000476466 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.57
SLC6A8-209ENST00000476466 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.57
SLC6A8-209ENST00000476466 GIGYF1O75420 1035 aaPredicted RBP18.63■□□□□ 0.57
SLC6A8-209ENST00000476466 TRIM35Q9UPQ4 493 aa18.63■□□□□ 0.57
SLC6A8-209ENST00000476466 ADCY9O60503 1353 aa18.63■□□□□ 0.57
SLC6A8-209ENST00000476466 SERPINB2P05120 415 aa18.62■□□□□ 0.57
SLC6A8-209ENST00000476466 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
SLC6A8-209ENST00000476466 COL11A2P13942 1736 aaPredicted RBP18.62■□□□□ 0.57
SLC6A8-209ENST00000476466 A0A087WZG4 1122 aa18.61■□□□□ 0.57
SLC6A8-209ENST00000476466 WDR43Q15061 677 aaKnown RBP eCLIP18.61■□□□□ 0.575e-10■■■□□ 15.5
SLC6A8-209ENST00000476466 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
SLC6A8-209ENST00000476466 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
SLC6A8-209ENST00000476466 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
SLC6A8-209ENST00000476466 BCS1LQ9Y276 419 aa18.61■□□□□ 0.57
SLC6A8-209ENST00000476466 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
SLC6A8-209ENST00000476466 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
SLC6A8-209ENST00000476466 ARFGEF1Q9Y6D6 1849 aa18.6■□□□□ 0.57
SLC6A8-209ENST00000476466 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
SLC6A8-209ENST00000476466 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
SLC6A8-209ENST00000476466 ZNF316A6NFI3 1004 aaPredicted RBP18.58■□□□□ 0.56
SLC6A8-209ENST00000476466 KRT24Q2M2I5 525 aa18.58■□□□□ 0.56
SLC6A8-209ENST00000476466 ATP10DQ9P241 1426 aa18.57■□□□□ 0.56
SLC6A8-209ENST00000476466 PRR5LQ6MZQ0 368 aa18.57■□□□□ 0.56
SLC6A8-209ENST00000476466 HLFQ16534 295 aa18.56■□□□□ 0.56
SLC6A8-209ENST00000476466 TTLL7Q6ZT98 887 aa18.56■□□□□ 0.56
SLC6A8-209ENST00000476466 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
SLC6A8-209ENST00000476466 CEP350Q5VT06 3117 aa18.56■□□□□ 0.56
SLC6A8-209ENST00000476466 PIM2Q9P1W9 311 aa18.55■□□□□ 0.56
SLC6A8-209ENST00000476466 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
SLC6A8-209ENST00000476466 PDIA6Q15084 440 aa18.54■□□□□ 0.56
SLC6A8-209ENST00000476466 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
SLC6A8-209ENST00000476466 CHL1O00533 1208 aa18.53■□□□□ 0.56
SLC6A8-209ENST00000476466 APAF1O14727 1248 aa18.53■□□□□ 0.56
SLC6A8-209ENST00000476466 ANXA1P04083 346 aa18.53■□□□□ 0.56
SLC6A8-209ENST00000476466 DALRD3Q5D0E6 543 aaKnown RBP18.53■□□□□ 0.56
SLC6A8-209ENST00000476466 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
SLC6A8-209ENST00000476466 SENP3-EIF4A1A0A087X0R7 540 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms