RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
TMEM254-211ENST00000476173 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
TMEM254-211ENST00000476173 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
TMEM254-211ENST00000476173 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
TMEM254-211ENST00000476173 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
TMEM254-211ENST00000476173 KCNQ4P56696 695 aa12.66□□□□□ -0.38
TMEM254-211ENST00000476173 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
TMEM254-211ENST00000476173 ITPK1Q13572 414 aa12.66□□□□□ -0.38
TMEM254-211ENST00000476173 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
TMEM254-211ENST00000476173 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
TMEM254-211ENST00000476173 ZNF831Q5JPB2 1677 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
TMEM254-211ENST00000476173 HOXB7P09629 217 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 BAG6P46379 1132 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 EN1Q05925 392 aaPredicted RBP12.65□□□□□ -0.38
TMEM254-211ENST00000476173 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 DNAJC10Q8IXB1 793 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
TMEM254-211ENST00000476173 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 USP16Q9Y5T5 823 aa12.65□□□□□ -0.38
TMEM254-211ENST00000476173 SOS1Q07889 1333 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-211ENST00000476173 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-211ENST00000476173 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
TMEM254-211ENST00000476173 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-211ENST00000476173 VAMP4O75379 141 aa12.64□□□□□ -0.39
TMEM254-211ENST00000476173 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-211ENST00000476173 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-211ENST00000476173 TJP1Q07157 1748 aa12.64□□□□□ -0.39
TMEM254-211ENST00000476173 C5P01031 1676 aa12.64□□□□□ -0.39
TMEM254-211ENST00000476173 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
TMEM254-211ENST00000476173 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
TMEM254-211ENST00000476173 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
TMEM254-211ENST00000476173 STARD3NLO95772 234 aa12.62□□□□□ -0.39
TMEM254-211ENST00000476173 CT47B1P0C2W7 299 aaPredicted RBP12.62□□□□□ -0.39
TMEM254-211ENST00000476173 TAF1LQ8IZX4 1826 aa12.61□□□□□ -0.39
TMEM254-211ENST00000476173 EIF2S2P20042 333 aaKnown RBP12.61□□□□□ -0.39
TMEM254-211ENST00000476173 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
TMEM254-211ENST00000476173 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
TMEM254-211ENST00000476173 LAMB4A4D0S4 1761 aa12.61□□□□□ -0.39
TMEM254-211ENST00000476173 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
TMEM254-211ENST00000476173 A1BGP04217 495 aa12.6□□□□□ -0.39
TMEM254-211ENST00000476173 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
TMEM254-211ENST00000476173 INTS5Q6P9B9 1019 aaKnown RBP12.6□□□□□ -0.39
TMEM254-211ENST00000476173 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
TMEM254-211ENST00000476173 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
TMEM254-211ENST00000476173 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
TMEM254-211ENST00000476173 RREB1Q92766 1687 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
TMEM254-211ENST00000476173 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
TMEM254-211ENST00000476173 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
TMEM254-211ENST00000476173 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
TMEM254-211ENST00000476173 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
TMEM254-211ENST00000476173 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
TMEM254-211ENST00000476173 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
TMEM254-211ENST00000476173 PDIA6Q15084 440 aa12.58□□□□□ -0.4
TMEM254-211ENST00000476173 PROSER3Q2NL68 480 aa12.58□□□□□ -0.4
TMEM254-211ENST00000476173 CHPF2Q9P2E5 772 aa12.58□□□□□ -0.4
TMEM254-211ENST00000476173 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
TMEM254-211ENST00000476173 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
TMEM254-211ENST00000476173 LRP10Q7Z4F1 713 aa12.57□□□□□ -0.4
TMEM254-211ENST00000476173 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
TMEM254-211ENST00000476173 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
TMEM254-211ENST00000476173 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
TMEM254-211ENST00000476173 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
TMEM254-211ENST00000476173 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 ANXA1P04083 346 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
TMEM254-211ENST00000476173 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
TMEM254-211ENST00000476173 ZNF827Q17R98 1081 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 ALDH1L2Q3SY69 923 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
TMEM254-211ENST00000476173 GNPATO15228 680 aa12.55□□□□□ -0.4
TMEM254-211ENST00000476173 MYL6BP14649 208 aa12.55□□□□□ -0.4
TMEM254-211ENST00000476173 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
TMEM254-211ENST00000476173 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
TMEM254-211ENST00000476173 AK7Q96M32 723 aa12.55□□□□□ -0.4
TMEM254-211ENST00000476173 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
TMEM254-211ENST00000476173 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
TMEM254-211ENST00000476173 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
TMEM254-211ENST00000476173 BCAR3O75815 825 aa12.54□□□□□ -0.4
TMEM254-211ENST00000476173 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-211ENST00000476173 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-211ENST00000476173 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
TMEM254-211ENST00000476173 G2E3Q7L622 706 aa12.54□□□□□ -0.4
TMEM254-211ENST00000476173 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-211ENST00000476173 SMC4Q9NTJ3 1288 aa12.54□□□□□ -0.4
TMEM254-211ENST00000476173 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
TMEM254-211ENST00000476173 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
TMEM254-211ENST00000476173 SLC15A2Q16348 729 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms