RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 GNAI2P04899 355 aa25.66■■□□□ 1.7
ITGA4-207ENST00000476089 PROSER3Q2NL68 480 aa25.66■■□□□ 1.7
ITGA4-207ENST00000476089 CEP85Q6P2H3 762 aa25.65■■□□□ 1.7
ITGA4-207ENST00000476089 WNK3Q9BYP7 1800 aa25.64■■□□□ 1.7
ITGA4-207ENST00000476089 NUCB1Q02818 461 aa25.64■■□□□ 1.7
ITGA4-207ENST00000476089 KSR2Q6VAB6 950 aa25.64■■□□□ 1.7
ITGA4-207ENST00000476089 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.7
ITGA4-207ENST00000476089 SLIT2O94813 1529 aa25.64■■□□□ 1.69
ITGA4-207ENST00000476089 ATP10DQ9P241 1426 aa25.63■■□□□ 1.69
ITGA4-207ENST00000476089 HMMRO75330 724 aa25.63■■□□□ 1.69
ITGA4-207ENST00000476089 FAM161AQ3B820 660 aa25.63■■□□□ 1.69
ITGA4-207ENST00000476089 USP16Q9Y5T5 823 aa25.63■■□□□ 1.69
ITGA4-207ENST00000476089 PDIA6Q15084 440 aa25.63■■□□□ 1.69
ITGA4-207ENST00000476089 ADCY9O60503 1353 aa25.62■■□□□ 1.69
ITGA4-207ENST00000476089 SPATA31A5Q5VU36 1347 aa25.61■■□□□ 1.69
ITGA4-207ENST00000476089 SPATA31A7Q8IWB4 1347 aa25.61■■□□□ 1.69
ITGA4-207ENST00000476089 MYL6BP14649 208 aa25.61■■□□□ 1.69
ITGA4-207ENST00000476089 MAP3K2Q9Y2U5 619 aa25.61■■□□□ 1.69
ITGA4-207ENST00000476089 TNS2Q63HR2 1409 aa25.61■■□□□ 1.69
ITGA4-207ENST00000476089 TOGARAM1Q9Y4F4 1720 aa25.61■■□□□ 1.69
ITGA4-207ENST00000476089 UBTFL1P0CB47 393 aaPredicted RBP25.6■■□□□ 1.69
ITGA4-207ENST00000476089 BEND3Q5T5X7 828 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 ANKRD45Q5TZF3 282 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 CHD1LQ86WJ1 897 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 PAPPAQ13219 1627 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 UBR2Q8IWV8 1755 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 AIMP1Q12904 312 aaKnown RBP25.6■■□□□ 1.69
ITGA4-207ENST00000476089 NGLY1Q96IV0 654 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 USP44Q9H0E7 712 aa25.6■■□□□ 1.69
ITGA4-207ENST00000476089 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
ITGA4-207ENST00000476089 DDB1Q16531 1140 aa25.59■■□□□ 1.69
ITGA4-207ENST00000476089 DCTPP1Q9H773 170 aa25.59■■□□□ 1.69
ITGA4-207ENST00000476089 SPATA31A6Q5VVP1 1343 aa25.59■■□□□ 1.69
ITGA4-207ENST00000476089 UNC5CLQ8IV45 518 aa25.58■■□□□ 1.69
ITGA4-207ENST00000476089 C8orf37Q96NL8 207 aa25.58■■□□□ 1.69
ITGA4-207ENST00000476089 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.69
ITGA4-207ENST00000476089 ERBB4Q15303 1308 aa25.58■■□□□ 1.69
ITGA4-207ENST00000476089 PTCD1O75127 700 aaKnown RBP25.58■■□□□ 1.68
ITGA4-207ENST00000476089 LNPKQ9C0E8 428 aa25.58■■□□□ 1.68
ITGA4-207ENST00000476089 KCPQ6ZWJ8 1503 aa25.57■■□□□ 1.68
ITGA4-207ENST00000476089 ALDH1L1O75891 902 aa25.57■■□□□ 1.68
ITGA4-207ENST00000476089 BARGINQ6ZT62 677 aa25.57■■□□□ 1.68
ITGA4-207ENST00000476089 RIC3Q7Z5B4 369 aa25.57■■□□□ 1.68
ITGA4-207ENST00000476089 LRP6O75581 1613 aa25.57■■□□□ 1.68
ITGA4-207ENST00000476089 XAGE3Q8WTP9 111 aa25.56■■□□□ 1.68
ITGA4-207ENST00000476089 PIGBQ92521 554 aa25.56■■□□□ 1.68
ITGA4-207ENST00000476089 COPS6Q7L5N1 327 aa25.56■■□□□ 1.68
ITGA4-207ENST00000476089 GLI3P10071 1580 aa25.55■■□□□ 1.68
ITGA4-207ENST00000476089 LRRFIP2Q9Y608 721 aaKnown RBP25.55■■□□□ 1.68
ITGA4-207ENST00000476089 C8orf34Q49A92 452 aa25.54■■□□□ 1.68
ITGA4-207ENST00000476089 HDAC5Q9UQL6 1122 aa25.54■■□□□ 1.68
ITGA4-207ENST00000476089 ITGB4P16144 1822 aa25.54■■□□□ 1.68
ITGA4-207ENST00000476089 NEXNQ0ZGT2 675 aa25.53■■□□□ 1.68
ITGA4-207ENST00000476089 LINS1Q8NG48 757 aa25.53■■□□□ 1.68
ITGA4-207ENST00000476089 ATP8B2P98198 1209 aa25.53■■□□□ 1.68
ITGA4-207ENST00000476089 ANKRD13DQ6ZTN6 518 aa25.52■■□□□ 1.68
ITGA4-207ENST00000476089 TEX13AQ9BXU3 409 aaPredicted RBP25.52■■□□□ 1.68
ITGA4-207ENST00000476089 C9orf78Q9NZ63 289 aaPredicted RBP25.52■■□□□ 1.68
ITGA4-207ENST00000476089 ASAP1Q9ULH1 1129 aa25.52■■□□□ 1.68
ITGA4-207ENST00000476089 KAT6BQ8WYB5 2073 aa25.52■■□□□ 1.68
ITGA4-207ENST00000476089 VSIG10Q8N0Z9 540 aa25.51■■□□□ 1.67
ITGA4-207ENST00000476089 SYTL4Q96C24 671 aaPredicted RBP25.51■■□□□ 1.67
ITGA4-207ENST00000476089 ATG3Q9NT62 314 aa25.51■■□□□ 1.67
ITGA4-207ENST00000476089 BCL9O00512 1426 aa25.51■■□□□ 1.67
ITGA4-207ENST00000476089 PIP4K2AP48426 406 aaPredicted RBP25.51■■□□□ 1.67
ITGA4-207ENST00000476089 VPS72Q15906 364 aa25.51■■□□□ 1.67
ITGA4-207ENST00000476089 LRP10Q7Z4F1 713 aa25.51■■□□□ 1.67
ITGA4-207ENST00000476089 FNBP4Q8N3X1 1017 aaPredicted RBP25.49■■□□□ 1.67
ITGA4-207ENST00000476089 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
ITGA4-207ENST00000476089 BCL9LQ86UU0 1499 aa25.48■■□□□ 1.67
ITGA4-207ENST00000476089 CWF19L2Q2TBE0 894 aaKnown RBP25.48■■□□□ 1.67
ITGA4-207ENST00000476089 RBM42Q9BTD8 480 aaKnown RBP25.48■■□□□ 1.67
ITGA4-207ENST00000476089 METTL22Q9BUU2 404 aaPredicted RBP25.48■■□□□ 1.67
ITGA4-207ENST00000476089 ANP32AP39687 249 aaKnown RBP25.47■■□□□ 1.67
ITGA4-207ENST00000476089 PRIM1P49642 420 aaKnown RBP25.47■■□□□ 1.67
ITGA4-207ENST00000476089 A1BGP04217 495 aa25.47■■□□□ 1.67
ITGA4-207ENST00000476089 MEX3CQ5U5Q3 659 aaKnown RBP25.47■■□□□ 1.67
ITGA4-207ENST00000476089 PNMA6EA0A0J9YXQ4 647 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 NBPF26B4DH59 902 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 NBPF14Q5TI25 921 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 NBPF10Q6P3W6 841 aaKnown RBP25.46■■□□□ 1.67
ITGA4-207ENST00000476089 NBPF15Q8N660 670 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 PLBD2Q8NHP8 589 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 MYD88Q99836 296 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 USP21Q9UK80 565 aa25.46■■□□□ 1.67
ITGA4-207ENST00000476089 DOT1LQ8TEK3 1739 aa25.45■■□□□ 1.67
ITGA4-207ENST00000476089 STARD3NLO95772 234 aa25.45■■□□□ 1.66
ITGA4-207ENST00000476089 HSPA1LP34931 641 aa25.45■■□□□ 1.66
ITGA4-207ENST00000476089 FAM98CQ17RN3 349 aaKnown RBP25.45■■□□□ 1.66
ITGA4-207ENST00000476089 IBTKQ9P2D0 1353 aaPredicted RBP25.45■■□□□ 1.66
ITGA4-207ENST00000476089 GRM8O00222 908 aa25.44■■□□□ 1.66
ITGA4-207ENST00000476089 MARCH10Q8NA82 808 aaPredicted RBP25.44■■□□□ 1.66
ITGA4-207ENST00000476089 APBB1O00213 710 aa25.44■■□□□ 1.66
ITGA4-207ENST00000476089 A0A0G2JS52 829 aa25.43■■□□□ 1.66
ITGA4-207ENST00000476089 PPP1R42Q7Z4L9 355 aa25.43■■□□□ 1.66
ITGA4-207ENST00000476089 SSH3Q8TE77 659 aa25.43■■□□□ 1.66
ITGA4-207ENST00000476089 NEURL1BA8MQ27 555 aa25.42■■□□□ 1.66
ITGA4-207ENST00000476089 IGKV5-2P06315 115 aa25.42■■□□□ 1.66
ITGA4-207ENST00000476089 DNAJC10Q8IXB1 793 aa25.42■■□□□ 1.66
ITGA4-207ENST00000476089 UTYO14607 1347 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms