RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 BCL2L13Q9BXK5 485 aa24.29■■□□□ 1.48
NR1H3-219ENST00000476086 COL5A3P25940 1745 aaPredicted RBP24.29■■□□□ 1.48
NR1H3-219ENST00000476086 IPO8O15397 1037 aaKnown RBP24.28■■□□□ 1.48
NR1H3-219ENST00000476086 BCAR3O75815 825 aa24.28■■□□□ 1.48
NR1H3-219ENST00000476086 SLC4A2P04920 1241 aa24.28■■□□□ 1.48
NR1H3-219ENST00000476086 SF3B2Q13435 895 aaKnown RBP24.28■■□□□ 1.48
NR1H3-219ENST00000476086 SLC4A9Q96Q91 983 aa24.28■■□□□ 1.48
NR1H3-219ENST00000476086 CCNL1Q9UK58 526 aaPredicted RBP24.28■■□□□ 1.48
NR1H3-219ENST00000476086 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
NR1H3-219ENST00000476086 TAF1LQ8IZX4 1826 aa24.27■■□□□ 1.48
NR1H3-219ENST00000476086 CANXP27824 592 aaKnown RBP24.27■■□□□ 1.48
NR1H3-219ENST00000476086 SLC27A3Q5K4L6 730 aa24.27■■□□□ 1.48
NR1H3-219ENST00000476086 MRPL50Q8N5N7 158 aaKnown RBP24.27■■□□□ 1.48
NR1H3-219ENST00000476086 DDX21Q9NR30 783 aaKnown RBP eCLIP24.27■■□□□ 1.48
NR1H3-219ENST00000476086 HYPKQ9NX55 129 aa24.27■■□□□ 1.48
NR1H3-219ENST00000476086 CHPF2Q9P2E5 772 aa24.27■■□□□ 1.48
NR1H3-219ENST00000476086 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
NR1H3-219ENST00000476086 CYP19A1P11511 503 aaPredicted RBP24.25■■□□□ 1.47
NR1H3-219ENST00000476086 CCDC125Q86Z20 511 aa24.25■■□□□ 1.47
NR1H3-219ENST00000476086 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
NR1H3-219ENST00000476086 EP400Q96L91 3159 aa24.24■■□□□ 1.47
NR1H3-219ENST00000476086 RRP1P56182 461 aaKnown RBP24.23■■□□□ 1.47
NR1H3-219ENST00000476086 ARHGAP45Q92619 1136 aa24.23■■□□□ 1.47
NR1H3-219ENST00000476086 PTPRCP08575 1304 aa24.23■■□□□ 1.47
NR1H3-219ENST00000476086 RNF123Q5XPI4 1314 aa24.23■■□□□ 1.47
NR1H3-219ENST00000476086 RREB1Q92766 1687 aa24.22■■□□□ 1.47
NR1H3-219ENST00000476086 MS4A1P11836 297 aa24.22■■□□□ 1.47
NR1H3-219ENST00000476086 ITPK1Q13572 414 aa24.22■■□□□ 1.47
NR1H3-219ENST00000476086 ZKSCAN2Q63HK3 967 aa24.22■■□□□ 1.47
NR1H3-219ENST00000476086 A1BGP04217 495 aa24.21■■□□□ 1.47
NR1H3-219ENST00000476086 NPM2Q86SE8 214 aaKnown RBP24.21■■□□□ 1.47
NR1H3-219ENST00000476086 CCDC87Q9NVE4 849 aa24.21■■□□□ 1.47
NR1H3-219ENST00000476086 NOB1Q9ULX3 412 aaKnown RBP24.21■■□□□ 1.47
NR1H3-219ENST00000476086 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
NR1H3-219ENST00000476086 MYL6BP14649 208 aa24.2■■□□□ 1.46
NR1H3-219ENST00000476086 CRKLP46109 303 aaKnown RBP24.2■■□□□ 1.46
NR1H3-219ENST00000476086 BAG6P46379 1132 aa24.2■■□□□ 1.46
NR1H3-219ENST00000476086 FLIIQ13045 1269 aa24.2■■□□□ 1.46
NR1H3-219ENST00000476086 PDIA6Q15084 440 aa24.2■■□□□ 1.46
NR1H3-219ENST00000476086 RC3H1Q5TC82 1133 aaKnown RBP24.2■■□□□ 1.46
NR1H3-219ENST00000476086 TXNRD1Q16881 649 aa24.19■■□□□ 1.46
NR1H3-219ENST00000476086 API5Q9BZZ5 524 aaKnown RBP24.19■■□□□ 1.46
NR1H3-219ENST00000476086 C4BP0C0L5 1744 aa24.18■■□□□ 1.46
NR1H3-219ENST00000476086 MYH14Q7Z406 1995 aaKnown RBP24.18■■□□□ 1.46
NR1H3-219ENST00000476086 DDX58O95786 925 aaKnown RBP24.18■■□□□ 1.46
NR1H3-219ENST00000476086 ATF7IPQ6VMQ6 1270 aa24.18■■□□□ 1.46
NR1H3-219ENST00000476086 IL6STP40189 918 aaPredicted RBP24.17■■□□□ 1.46
NR1H3-219ENST00000476086 FKBP5Q13451 457 aaPredicted RBP24.17■■□□□ 1.46
NR1H3-219ENST00000476086 LINC00116Q8NCU8 138 aa24.17■■□□□ 1.46
NR1H3-219ENST00000476086 NBPF26B4DH59 902 aa24.16■■□□□ 1.46
NR1H3-219ENST00000476086 ANXA1P04083 346 aa24.16■■□□□ 1.46
NR1H3-219ENST00000476086 NEFLP07196 543 aa24.16■■□□□ 1.46
NR1H3-219ENST00000476086 PROSER3Q2NL68 480 aa24.16■■□□□ 1.46
NR1H3-219ENST00000476086 NBPF14Q5TI25 921 aa24.16■■□□□ 1.46
NR1H3-219ENST00000476086 NBPF10Q6P3W6 841 aaKnown RBP24.16■■□□□ 1.46
NR1H3-219ENST00000476086 NBPF15Q8N660 670 aa24.16■■□□□ 1.46
NR1H3-219ENST00000476086 PHAXQ9H814 394 aaKnown RBP24.16■■□□□ 1.46
NR1H3-219ENST00000476086 PLIN1O60240 522 aa24.15■■□□□ 1.46
NR1H3-219ENST00000476086 KCNQ4P56696 695 aa24.15■■□□□ 1.46
NR1H3-219ENST00000476086 PDE3AQ14432 1141 aa24.15■■□□□ 1.46
NR1H3-219ENST00000476086 INTS5Q6P9B9 1019 aaKnown RBP24.15■■□□□ 1.46
NR1H3-219ENST00000476086 G2E3Q7L622 706 aa24.15■■□□□ 1.46
NR1H3-219ENST00000476086 FTSJ3Q8IY81 847 aaKnown RBP24.15■■□□□ 1.46
NR1H3-219ENST00000476086 LRRC4BQ9NT99 713 aa24.15■■□□□ 1.46
NR1H3-219ENST00000476086 ZBTB1Q9Y2K1 713 aa24.15■■□□□ 1.46
NR1H3-219ENST00000476086 PIP4K2AP48426 406 aaPredicted RBP24.14■■□□□ 1.45
NR1H3-219ENST00000476086 TRIM27P14373 513 aa24.13■■□□□ 1.45
NR1H3-219ENST00000476086 AIMP1Q12904 312 aaKnown RBP24.13■■□□□ 1.45
NR1H3-219ENST00000476086 COPS6Q7L5N1 327 aa24.13■■□□□ 1.45
NR1H3-219ENST00000476086 LRP10Q7Z4F1 713 aa24.13■■□□□ 1.45
NR1H3-219ENST00000476086 DZIP1LQ8IYY4 767 aaKnown RBP24.13■■□□□ 1.45
NR1H3-219ENST00000476086 XAGE3Q8WTP9 111 aa24.13■■□□□ 1.45
NR1H3-219ENST00000476086 AK7Q96M32 723 aa24.13■■□□□ 1.45
NR1H3-219ENST00000476086 PROM2Q8N271 834 aa24.12■■□□□ 1.45
NR1H3-219ENST00000476086 CAMKK2Q96RR4 588 aa24.12■■□□□ 1.45
NR1H3-219ENST00000476086 ZNF330Q9Y3S2 320 aaPredicted RBP24.12■■□□□ 1.45
NR1H3-219ENST00000476086 A0A087WZG4 1122 aa24.11■■□□□ 1.45
NR1H3-219ENST00000476086 RPS6KA4O75676 772 aa24.11■■□□□ 1.45
NR1H3-219ENST00000476086 EIF5P55010 431 aaKnown RBP24.11■■□□□ 1.45
NR1H3-219ENST00000476086 EN1Q05925 392 aaPredicted RBP24.11■■□□□ 1.45
NR1H3-219ENST00000476086 KIF6Q6ZMV9 814 aa24.11■■□□□ 1.45
NR1H3-219ENST00000476086 RTCBQ9Y3I0 505 aaKnown RBP24.11■■□□□ 1.45
NR1H3-219ENST00000476086 KSR2Q6VAB6 950 aa24.1■■□□□ 1.45
NR1H3-219ENST00000476086 ANKRD13DQ6ZTN6 518 aa24.1■■□□□ 1.45
NR1H3-219ENST00000476086 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
NR1H3-219ENST00000476086 GNPATO15228 680 aa24.09■■□□□ 1.45
NR1H3-219ENST00000476086 RIC3Q7Z5B4 369 aa24.09■■□□□ 1.45
NR1H3-219ENST00000476086 PLBD2Q8NHP8 589 aa24.09■■□□□ 1.45
NR1H3-219ENST00000476086 UBR3Q6ZT12 1888 aa24.09■■□□□ 1.45
NR1H3-219ENST00000476086 N4BP2Q86UW6 1770 aaPredicted RBP24.08■■□□□ 1.45
NR1H3-219ENST00000476086 PXDNLA1KZ92 1463 aa24.08■■□□□ 1.45
NR1H3-219ENST00000476086 COL15A1P39059 1388 aa24.08■■□□□ 1.45
NR1H3-219ENST00000476086 PI4KAP2A4QPH2 592 aa24.08■■□□□ 1.45
NR1H3-219ENST00000476086 EZH2Q15910 746 aaKnown RBP24.08■■□□□ 1.45
NR1H3-219ENST00000476086 PI4KAP1Q8N8J0 262 aa24.08■■□□□ 1.45
NR1H3-219ENST00000476086 CLUAP1Q96AJ1 413 aa24.08■■□□□ 1.45
NR1H3-219ENST00000476086 ABCC4O15439 1325 aa24.08■■□□□ 1.44
NR1H3-219ENST00000476086 NUP188Q5SRE5 1749 aa24.07■■□□□ 1.44
NR1H3-219ENST00000476086 ADRA2BP18089 450 aa24.07■■□□□ 1.44
NR1H3-219ENST00000476086 DNAAF4Q8WXU2 420 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms