RNA–Protein interactions for RNA: ENST00000476074.5

PCDH15-222, Transcript of protocadherin related 15, human

TSL 3

Gene PCDH15, Length 754 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-222	ENST00000476074	CBLB	Q13191	982 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	TLR1	Q15399	786 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	CTC1	Q2NKJ3	1217 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	POTEA	Q6S8J7	498 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	SLC9A9	Q8IVB4	645 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	HELQ	Q8TDG4	1101 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	VTI1A	Q96AJ9	217 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	PURB	Q96QR8	312 aa	Known RBP	7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	MKNK1	Q9BUB5	465 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074	DACH1	Q9UI36	760 aa		7.81	□□□□□ -1.16
PCDH15-222	ENST00000476074		H3BRB1	525 aa		7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	SMPD1	P17405	629 aa		7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	GLYCTK	Q8IVS8	523 aa		7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	TUT1	Q9H6E5	874 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	CHMP3	Q9Y3E7	222 aa		7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	EIF4G1	Q04637	1599 aa	Known RBP	7.8	□□□□□ -1.16
PCDH15-222	ENST00000476074	HIRA	P54198	1017 aa	Predicted RBP	7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	MARS	P56192	900 aa	Known RBP	7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	CENPC	Q03188	943 aa		7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	ZNF211	Q13398	564 aa	Predicted RBP	7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	CAPN12	Q6ZSI9	719 aa		7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	NLRP3	Q96P20	1036 aa		7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	ZFAND3	Q9H8U3	227 aa		7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	BIN2	Q9UBW5	565 aa	Predicted RBP	7.79	□□□□□ -1.16
PCDH15-222	ENST00000476074	WIPF1	O43516	503 aa		7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	NPR3	P17342	541 aa		7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	GPC1	P35052	558 aa		7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	TEAD4	Q15561	434 aa		7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	C16orf46	Q6P387	395 aa		7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	MEIOB	Q8N635	442 aa		7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.78	□□□□□ -1.16
PCDH15-222	ENST00000476074	FAM13A	O94988	1023 aa		7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	NFX1	Q12986	1120 aa	Known RBP	7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	NAA30	Q147X3	362 aa	Predicted RBP	7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	AGBL1	Q96MI9	1066 aa		7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	GMPR2	Q9P2T1	348 aa	Known RBP	7.77	□□□□□ -1.17
PCDH15-222	ENST00000476074	SERTM1	A2A2V5	107 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	MEN1	O00255	615 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	AXIN1	O15169	862 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	ECM1	Q16610	540 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	TBCEL	Q5QJ74	424 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	ZNF295-AS1	Q8N0V1	137 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	MYO19	Q96H55	970 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	TSEN34	Q9BSV6	310 aa	Known RBP	7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	ANO2	Q9NQ90	1003 aa		7.76	□□□□□ -1.17
PCDH15-222	ENST00000476074	EML1	O00423	815 aa		7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	GTF2E1	P29083	439 aa	Predicted RBP	7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	ARHGAP4	P98171	946 aa		7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	RELB	Q01201	579 aa		7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	NIFK	Q9BYG3	293 aa	Known RBP	7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	USP3	Q9Y6I4	520 aa		7.75	□□□□□ -1.17
PCDH15-222	ENST00000476074	WFS1	O76024	890 aa		7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	NOS2	P35228	1153 aa		7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	RNF144A	P50876	292 aa	Predicted RBP	7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	HPS1	Q92902	700 aa		7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	DCTN4	Q9UJW0	460 aa		7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	BICRA	Q9NZM4	1560 aa		7.74	□□□□□ -1.17
PCDH15-222	ENST00000476074	SPINT1	O43278	529 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	MTMR3	Q13615	1198 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	COX20	Q5RI15	118 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	LCE2C	Q5TA81	110 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	TMEM214	Q6NUQ4	689 aa	Known RBP	7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	RHBDD1	Q8TEB9	315 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	ZDHHC1	Q8WTX9	485 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	GRIP2	Q9C0E4	1043 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	SAP130	Q9H0E3	1048 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	QTRT2	Q9H974	415 aa	Known RBP	7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	CABP1	Q9NZU7	370 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	STIM2	Q9P246	746 aa		7.73	□□□□□ -1.17
PCDH15-222	ENST00000476074	UPP2	O95045	317 aa		7.72	□□□□□ -1.17
PCDH15-222	ENST00000476074	GNAS	Q5JWF2	1037 aa		7.72	□□□□□ -1.17
PCDH15-222	ENST00000476074	ALKBH2	Q6NS38	261 aa		7.72	□□□□□ -1.17
PCDH15-222	ENST00000476074	L3MBTL2	Q969R5	705 aa		7.72	□□□□□ -1.17
PCDH15-222	ENST00000476074	STK17A	Q9UEE5	414 aa		7.72	□□□□□ -1.17
PCDH15-222	ENST00000476074	ZNF232	Q9UNY5	417 aa		7.72	□□□□□ -1.17
PCDH15-222	ENST00000476074	SCRIB	Q14160	1630 aa		7.71	□□□□□ -1.17
PCDH15-222	ENST00000476074	C11orf95	C9JLR9	678 aa	Predicted RBP	7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	TNFRSF10B	O14763	440 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	CAPN5	O15484	640 aa	Predicted RBP	7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	RTN1	Q16799	776 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	SLC27A3	Q5K4L6	730 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	C1orf53	Q5VUE5	145 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	ALDH16A1	Q8IZ83	802 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	LINC00528	Q8N1L1	170 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	ABTB2	Q8N961	1025 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	ASB16	Q96NS5	453 aa		7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	7.71	□□□□□ -1.18
PCDH15-222	ENST00000476074	RBM47	A0AV96	593 aa	Known RBP	7.7	□□□□□ -1.18
PCDH15-222	ENST00000476074	SPATA31C2	B4DYI2	1134 aa		7.7	□□□□□ -1.18
PCDH15-222	ENST00000476074	MAPK1	P28482	360 aa		7.7	□□□□□ -1.18
PCDH15-222	ENST00000476074	NOM1	Q5C9Z4	860 aa	Known RBP	7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms