RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 RTCBQ9Y3I0 505 aaKnown RBP12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 N4BP2Q86UW6 1770 aaPredicted RBP12.46□□□□□ -0.41
SEMA3C-208ENST00000475955 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
SEMA3C-208ENST00000475955 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
SEMA3C-208ENST00000475955 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.41
SEMA3C-208ENST00000475955 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
SEMA3C-208ENST00000475955 FCHSD2O94868 740 aa12.45□□□□□ -0.42
SEMA3C-208ENST00000475955 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
SEMA3C-208ENST00000475955 KCNQ3O43525 872 aa12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 GYS1P13807 737 aa12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 AFDNP55196 1824 aaKnown RBP12.44□□□□□ -0.42
SEMA3C-208ENST00000475955 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 MMP10P09238 476 aa12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 YBX3P16989 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 ADRA2BP18089 450 aa12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 YY1P25490 414 aa12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
SEMA3C-208ENST00000475955 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
SEMA3C-208ENST00000475955 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
SEMA3C-208ENST00000475955 MCM10Q7L590 875 aa12.42□□□□□ -0.42
SEMA3C-208ENST00000475955 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
SEMA3C-208ENST00000475955 CCDC87Q9NVE4 849 aa12.42□□□□□ -0.42
SEMA3C-208ENST00000475955 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
SEMA3C-208ENST00000475955 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 RFC4P35249 363 aa12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 TEFQ10587 303 aa12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 GPR162Q16538 588 aa12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
SEMA3C-208ENST00000475955 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
SEMA3C-208ENST00000475955 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
SEMA3C-208ENST00000475955 HEG1Q9ULI3 1381 aa12.4□□□□□ -0.42
SEMA3C-208ENST00000475955 DDR1Q08345 913 aa12.39□□□□□ -0.43
SEMA3C-208ENST00000475955 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
SEMA3C-208ENST00000475955 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
SEMA3C-208ENST00000475955 PXDNLA1KZ92 1463 aa12.39□□□□□ -0.43
SEMA3C-208ENST00000475955 C10orf71Q711Q0 1435 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 COL15A1P39059 1388 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
SEMA3C-208ENST00000475955 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
SEMA3C-208ENST00000475955 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
SEMA3C-208ENST00000475955 TM4SF1P30408 202 aa12.37□□□□□ -0.43
SEMA3C-208ENST00000475955 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
SEMA3C-208ENST00000475955 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
SEMA3C-208ENST00000475955 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
SEMA3C-208ENST00000475955 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 A1BGP04217 495 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 FMNL2Q96PY5 1086 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 THUMPD2Q9BTF0 503 aaKnown RBP12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 NARFQ9UHQ1 456 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 ARFGEF1Q9Y6D6 1849 aa12.36□□□□□ -0.43
SEMA3C-208ENST00000475955 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
SEMA3C-208ENST00000475955 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
SEMA3C-208ENST00000475955 DLEC1Q9Y238 1755 aa12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 STARD3NLO95772 234 aa12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 KCNA3P22001 575 aa12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 NFIXQ14938 502 aa12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
SEMA3C-208ENST00000475955 ZPR1O75312 459 aa12.33□□□□□ -0.44
SEMA3C-208ENST00000475955 DPEP1P16444 411 aa12.33□□□□□ -0.44
SEMA3C-208ENST00000475955 DEKP35659 375 aaKnown RBP12.33□□□□□ -0.44
SEMA3C-208ENST00000475955 TAF7Q15545 349 aaPredicted RBP12.33□□□□□ -0.44
SEMA3C-208ENST00000475955 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
SEMA3C-208ENST00000475955 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
SEMA3C-208ENST00000475955 TGFB2P61812 414 aa12.32□□□□□ -0.44
SEMA3C-208ENST00000475955 TBC1D2BQ9UPU7 963 aa12.32□□□□□ -0.44
SEMA3C-208ENST00000475955 SBF1O95248 1867 aa12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 SNRPA1P09661 255 aaKnown RBP12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 IL6STP40189 918 aaPredicted RBP12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 NUP98P52948 1817 aa12.31□□□□□ -0.44
SEMA3C-208ENST00000475955 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 CAMTA2O94983 1202 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms