RNA–Protein interactions for RNA: ENST00000475593.5

TFRC-211, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-211ENST00000475593 CHRNA5P30532 468 aa8.51□□□□□ -1.05
TFRC-211ENST00000475593 DALRD3Q5D0E6 543 aaKnown RBP8.51□□□□□ -1.05
TFRC-211ENST00000475593 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
TFRC-211ENST00000475593 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
TFRC-211ENST00000475593 MAP2P11137 1827 aaKnown RBP8.51□□□□□ -1.05
TFRC-211ENST00000475593 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
TFRC-211ENST00000475593 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
TFRC-211ENST00000475593 AMPHP49418 695 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 TMF1P82094 1093 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 C10orf71Q711Q0 1435 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 RTN4Q9NQC3 1192 aaKnown RBP8.5□□□□□ -1.05
TFRC-211ENST00000475593 PARP3Q9Y6F1 533 aa8.5□□□□□ -1.05
TFRC-211ENST00000475593 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 ATP6V1AP38606 617 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 VEGFBP49765 207 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 ITPK1Q13572 414 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 TRAPPC3LQ5T215 181 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 NBPF6Q5VWK0 638 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 PIGBQ92521 554 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
TFRC-211ENST00000475593 NBPF4Q96M43 638 aa8.49□□□□□ -1.05
TFRC-211ENST00000475593 CASP8AP2Q9UKL3 1982 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 LOC102724428A0A0B4J2F2 783 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 POTECB2RU33 542 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 HMGB2P26583 209 aaKnown RBP8.48□□□□□ -1.05
TFRC-211ENST00000475593 SIK1P57059 783 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 RAPGEF4Q8WZA2 1011 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
TFRC-211ENST00000475593 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
TFRC-211ENST00000475593 HSPA8P11142 646 aaKnown RBP8.47□□□□□ -1.05
TFRC-211ENST00000475593 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
TFRC-211ENST00000475593 HOXC9P31274 260 aa8.47□□□□□ -1.05
TFRC-211ENST00000475593 ARHGEF1Q92888 912 aaKnown RBP8.47□□□□□ -1.05
TFRC-211ENST00000475593 ASAP1Q9ULH1 1129 aa8.47□□□□□ -1.05
TFRC-211ENST00000475593 CNTNAP1P78357 1384 aa8.47□□□□□ -1.05
TFRC-211ENST00000475593 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.05
TFRC-211ENST00000475593 CHRM1P11229 460 aaPredicted RBP8.46□□□□□ -1.06
TFRC-211ENST00000475593 GYS1P13807 737 aa8.46□□□□□ -1.06
TFRC-211ENST00000475593 RFC4P35249 363 aa8.46□□□□□ -1.06
TFRC-211ENST00000475593 RGS19P49795 217 aa8.46□□□□□ -1.06
TFRC-211ENST00000475593 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.06
TFRC-211ENST00000475593 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
TFRC-211ENST00000475593 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
TFRC-211ENST00000475593 MAP3K19Q56UN5 1328 aa8.46□□□□□ -1.06
TFRC-211ENST00000475593 MYH14Q7Z406 1995 aaKnown RBP8.46□□□□□ -1.06
TFRC-211ENST00000475593 CYP27B1O15528 508 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 PLCG2P16885 1265 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 LMNB1P20700 586 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 SLC12A5Q9H2X9 1139 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 PCDH11XQ9BZA7 1347 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 SBNO2Q9Y2G9 1366 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
TFRC-211ENST00000475593 CACNA1SQ13698 1873 aa8.45□□□□□ -1.06
TFRC-211ENST00000475593 TNRC18O15417 2968 aaPredicted RBP8.44□□□□□ -1.06
TFRC-211ENST00000475593 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
TFRC-211ENST00000475593 GRM1Q13255 1194 aa8.44□□□□□ -1.06
TFRC-211ENST00000475593 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
TFRC-211ENST00000475593 DPY19L2Q6NUT2 758 aa8.44□□□□□ -1.06
TFRC-211ENST00000475593 HDGFL2Q7Z4V5 671 aaPredicted RBP8.44□□□□□ -1.06
TFRC-211ENST00000475593 SRP68Q9UHB9 627 aaKnown RBP8.44□□□□□ -1.06
TFRC-211ENST00000475593 PDE4DIPQ5VU43 2346 aa8.44□□□□□ -1.06
TFRC-211ENST00000475593 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
TFRC-211ENST00000475593 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
TFRC-211ENST00000475593 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
TFRC-211ENST00000475593 DDNO94850 711 aaPredicted RBP8.42□□□□□ -1.06
TFRC-211ENST00000475593 DDR1Q08345 913 aa8.42□□□□□ -1.06
TFRC-211ENST00000475593 DEFB115Q30KQ5 88 aa8.42□□□□□ -1.06
TFRC-211ENST00000475593 ATG3Q9NT62 314 aa8.42□□□□□ -1.06
TFRC-211ENST00000475593 CD163L1Q9NR16 1453 aa8.42□□□□□ -1.06
TFRC-211ENST00000475593 COL5A3P25940 1745 aaPredicted RBP8.41□□□□□ -1.06
TFRC-211ENST00000475593 CGNL1Q0VF96 1302 aa8.41□□□□□ -1.06
TFRC-211ENST00000475593 ERFEQ4G0M1 354 aa8.41□□□□□ -1.06
TFRC-211ENST00000475593 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
TFRC-211ENST00000475593 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
TFRC-211ENST00000475593 COG3Q96JB2 828 aa8.41□□□□□ -1.06
TFRC-211ENST00000475593 WDR33Q9C0J8 1336 aaKnown RBP8.4□□□□□ -1.06
TFRC-211ENST00000475593 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
TFRC-211ENST00000475593 RPS6KA4O75676 772 aa8.4□□□□□ -1.06
TFRC-211ENST00000475593 PYGBP11216 843 aa8.4□□□□□ -1.06
TFRC-211ENST00000475593 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
TFRC-211ENST00000475593 ABT1Q9ULW3 272 aaKnown RBP8.4□□□□□ -1.06
TFRC-211ENST00000475593 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.07
TFRC-211ENST00000475593 KDM6AO15550 1401 aaPredicted RBP8.39□□□□□ -1.07
TFRC-211ENST00000475593 EDC4Q6P2E9 1401 aaKnown RBP8.39□□□□□ -1.07
TFRC-211ENST00000475593 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 PASKQ96RG2 1323 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 NFKBIEO00221 500 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
TFRC-211ENST00000475593 HSP90AB2PQ58FF8 381 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 MCOLN1Q9GZU1 580 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 PCDHB8Q9UN66 801 aa8.39□□□□□ -1.07
TFRC-211ENST00000475593 A0A1W2PP64 1363 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms