RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CAMKK2Q96RR4 588 aa19.5■□□□□ 0.71
MCF2L-224ENST00000475524 NUP188Q5SRE5 1749 aa19.5■□□□□ 0.71
MCF2L-224ENST00000475524 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-224ENST00000475524 ITPK1Q13572 414 aa19.49■□□□□ 0.71
MCF2L-224ENST00000475524 ILDR2Q71H61 639 aa19.49■□□□□ 0.71
MCF2L-224ENST00000475524 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
MCF2L-224ENST00000475524 MYH14Q7Z406 1995 aaKnown RBP19.48■□□□□ 0.71
MCF2L-224ENST00000475524 ELL2O00472 640 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-224ENST00000475524 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-224ENST00000475524 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-224ENST00000475524 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
MCF2L-224ENST00000475524 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
MCF2L-224ENST00000475524 PROM2Q8N271 834 aa19.47■□□□□ 0.71
MCF2L-224ENST00000475524 STK31Q9BXU1 1019 aa19.47■□□□□ 0.71
MCF2L-224ENST00000475524 DDX21Q9NR30 783 aaKnown RBP eCLIP19.46■□□□□ 0.71
MCF2L-224ENST00000475524 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
MCF2L-224ENST00000475524 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
MCF2L-224ENST00000475524 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
MCF2L-224ENST00000475524 CENPBP07199 599 aaPredicted RBP19.45■□□□□ 0.7
MCF2L-224ENST00000475524 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
MCF2L-224ENST00000475524 LINC00116Q8NCU8 138 aa19.45■□□□□ 0.7
MCF2L-224ENST00000475524 EIF2S2P20042 333 aaKnown RBP19.44■□□□□ 0.7
MCF2L-224ENST00000475524 CRKLP46109 303 aaKnown RBP19.44■□□□□ 0.7
MCF2L-224ENST00000475524 EN1Q05925 392 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-224ENST00000475524 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
MCF2L-224ENST00000475524 RCAN3Q9UKA8 241 aa19.44■□□□□ 0.7
MCF2L-224ENST00000475524 IL6STP40189 918 aaPredicted RBP19.43■□□□□ 0.7
MCF2L-224ENST00000475524 EZH2Q15910 746 aaKnown RBP19.43■□□□□ 0.7
MCF2L-224ENST00000475524 PDIA6Q15084 440 aa19.42■□□□□ 0.7
MCF2L-224ENST00000475524 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
MCF2L-224ENST00000475524 SSH1Q8WYL5 1049 aa19.42■□□□□ 0.7
MCF2L-224ENST00000475524 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
MCF2L-224ENST00000475524 KIF16BQ96L93 1317 aa19.42■□□□□ 0.7
MCF2L-224ENST00000475524 LRP10Q7Z4F1 713 aa19.41■□□□□ 0.7
MCF2L-224ENST00000475524 DEFB132Q7Z7B7 95 aa19.41■□□□□ 0.7
MCF2L-224ENST00000475524 SMC4Q9NTJ3 1288 aa19.41■□□□□ 0.7
MCF2L-224ENST00000475524 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
MCF2L-224ENST00000475524 TUBGCP6Q96RT7 1819 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 RGL2O15211 777 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 RPS6KA4O75676 772 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 A1BGP04217 495 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 ADRA2BP18089 450 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
MCF2L-224ENST00000475524 MRPL50Q8N5N7 158 aaKnown RBP19.4■□□□□ 0.7
MCF2L-224ENST00000475524 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
MCF2L-224ENST00000475524 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 EIF5P55010 431 aaKnown RBP19.39■□□□□ 0.69
MCF2L-224ENST00000475524 KCNQ4P56696 695 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 AK7Q96M32 723 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 PTPRCP08575 1304 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 C4AP0C0L4 1744 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 BCORQ6W2J9 1755 aa19.39■□□□□ 0.69
MCF2L-224ENST00000475524 A0A087WZG4 1122 aa19.38■□□□□ 0.69
MCF2L-224ENST00000475524 SSFA2P28290 1259 aa19.38■□□□□ 0.69
MCF2L-224ENST00000475524 SCN7AQ01118 1682 aa19.38■□□□□ 0.69
MCF2L-224ENST00000475524 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
MCF2L-224ENST00000475524 NECTIN2Q92692 538 aa19.38■□□□□ 0.69
MCF2L-224ENST00000475524 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
MCF2L-224ENST00000475524 N4BP2Q86UW6 1770 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-224ENST00000475524 COL15A1P39059 1388 aa19.37■□□□□ 0.69
MCF2L-224ENST00000475524 NPM2Q86SE8 214 aaKnown RBP19.37■□□□□ 0.69
MCF2L-224ENST00000475524 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
MCF2L-224ENST00000475524 GNPATO15228 680 aa19.36■□□□□ 0.69
MCF2L-224ENST00000475524 IPO8O15397 1037 aaKnown RBP19.36■□□□□ 0.69
MCF2L-224ENST00000475524 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
MCF2L-224ENST00000475524 PROSER3Q2NL68 480 aa19.36■□□□□ 0.69
MCF2L-224ENST00000475524 ARFGEF2Q9Y6D5 1785 aa19.36■□□□□ 0.69
MCF2L-224ENST00000475524 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
MCF2L-224ENST00000475524 FLIIQ13045 1269 aa19.35■□□□□ 0.69
MCF2L-224ENST00000475524 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-224ENST00000475524 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
MCF2L-224ENST00000475524 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
MCF2L-224ENST00000475524 MYL6BP14649 208 aa19.34■□□□□ 0.69
MCF2L-224ENST00000475524 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
MCF2L-224ENST00000475524 ERVV-1B6SEH8 477 aa19.33■□□□□ 0.68
MCF2L-224ENST00000475524 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
MCF2L-224ENST00000475524 BCAR3O75815 825 aa19.33■□□□□ 0.68
MCF2L-224ENST00000475524 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
MCF2L-224ENST00000475524 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
MCF2L-224ENST00000475524 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
MCF2L-224ENST00000475524 API5Q9BZZ5 524 aaKnown RBP19.33■□□□□ 0.68
MCF2L-224ENST00000475524 ANKRD36CQ5JPF3 1778 aa19.33■□□□□ 0.68
MCF2L-224ENST00000475524 ANXA1P04083 346 aa19.32■□□□□ 0.68
MCF2L-224ENST00000475524 KIF6Q6ZMV9 814 aa19.32■□□□□ 0.68
MCF2L-224ENST00000475524 COPS6Q7L5N1 327 aa19.32■□□□□ 0.68
MCF2L-224ENST00000475524 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
MCF2L-224ENST00000475524 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
MCF2L-224ENST00000475524 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
MCF2L-224ENST00000475524 NUP98P52948 1817 aa19.32■□□□□ 0.68
MCF2L-224ENST00000475524 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-224ENST00000475524 MAP3K15Q6ZN16 1313 aa19.31■□□□□ 0.68
MCF2L-224ENST00000475524 MS4A1P11836 297 aa19.31■□□□□ 0.68
MCF2L-224ENST00000475524 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-224ENST00000475524 TRAPPC3LQ5T215 181 aa19.31■□□□□ 0.68
MCF2L-224ENST00000475524 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
MCF2L-224ENST00000475524 G2E3Q7L622 706 aa19.31■□□□□ 0.68
MCF2L-224ENST00000475524 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms