RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
SSPO-205ENST00000475488 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
SSPO-205ENST00000475488 SPATA24Q86W54 205 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 KIF5CO60282 957 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 MCM3P25205 808 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 MYD88Q99836 296 aa16.5■□□□□ 0.23
SSPO-205ENST00000475488 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
SSPO-205ENST00000475488 FILIP1Q7Z7B0 1213 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 HLA-DOAP06340 250 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
SSPO-205ENST00000475488 SLC4A8Q2Y0W8 1093 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 TMCO5BA8MYB1 307 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 USO1O60763 962 aaKnown RBP16.49■□□□□ 0.23
SSPO-205ENST00000475488 PPP1R14CQ8TAE6 165 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 FSD2A1L4K1 749 aa16.49■□□□□ 0.23
SSPO-205ENST00000475488 PRPF4BQ13523 1007 aaKnown RBP16.48■□□□□ 0.23
SSPO-205ENST00000475488 IL1RAPL2Q9NP60 686 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 SERPINA10Q9UK55 444 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 CAMK4Q16566 473 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 TCERG1LQ5VWI1 586 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 IKBKGQ9Y6K9 419 aa16.48■□□□□ 0.23
SSPO-205ENST00000475488 CCDC194A0A1B0GVG4 234 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 RFC4P35249 363 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 ZNF213O14771 459 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 ACTN2P35609 894 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 CFAP57Q96MR6 1250 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 TRMT112Q9UI30 125 aaKnown RBP16.47■□□□□ 0.23
SSPO-205ENST00000475488 CFAP70Q5T0N1 1121 aa16.47■□□□□ 0.23
SSPO-205ENST00000475488 AMPD3Q01432 767 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
SSPO-205ENST00000475488 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 CBX1P83916 185 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 TAF12Q16514 161 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 MAP3K11Q16584 847 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 SLU7O95391 586 aaKnown RBP16.46■□□□□ 0.23
SSPO-205ENST00000475488 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
SSPO-205ENST00000475488 PAFAH1B1P43034 410 aa16.46■□□□□ 0.22
SSPO-205ENST00000475488 ERICH4A6NGS2 130 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 SH3BP5O60239 455 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 NOP2P46087 812 aaKnown RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 RNF41Q9H4P4 317 aaPredicted RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 MTIF2P46199 727 aaKnown RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 NCBP1Q09161 790 aaKnown RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 PLS1Q14651 629 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 SPECC1Q5M775 1068 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 C8orf76Q96K31 380 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
SSPO-205ENST00000475488 BAG3O95817 575 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 RFX1P22670 979 aa16.45■□□□□ 0.22
SSPO-205ENST00000475488 BMS1Q14692 1282 aaKnown RBP16.44■□□□□ 0.22
SSPO-205ENST00000475488 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
SSPO-205ENST00000475488 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 HLTFQ14527 1009 aaKnown RBP eCLIP16.44■□□□□ 0.22
SSPO-205ENST00000475488 TBC1D5Q92609 795 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 BOLA2Q9H3K6 86 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 ODF2LQ9ULJ1 636 aa16.44■□□□□ 0.22
SSPO-205ENST00000475488 STX6O43752 255 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 KIF5BP33176 963 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 UBXN4Q92575 508 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 ALS2CR12Q96Q35 445 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 PHACTR2O75167 634 aa16.43■□□□□ 0.22
SSPO-205ENST00000475488 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
SSPO-205ENST00000475488 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
SSPO-205ENST00000475488 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
SSPO-205ENST00000475488 PDIA4P13667 645 aaKnown RBP16.42■□□□□ 0.22
SSPO-205ENST00000475488 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 UQCRHP07919 91 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
SSPO-205ENST00000475488 PDE4BQ07343 736 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 KIF1BPQ96EK5 621 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 ANKRD50Q9ULJ7 1429 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 NDC80O14777 642 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 APBB1IPQ7Z5R6 666 aaPredicted RBP16.42■□□□□ 0.22
SSPO-205ENST00000475488 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 CCDC175P0C221 793 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 KIF21BO75037 1637 aa16.42■□□□□ 0.22
SSPO-205ENST00000475488 ZNF710Q8N1W2 664 aa16.41■□□□□ 0.22
SSPO-205ENST00000475488 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms