RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 SYNE3Q6ZMZ3 975 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 ECHDC1Q9NTX5 307 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 FAM135BQ49AJ0 1406 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
PHTF1-209ENST00000474926 FIBPO43427 364 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 CASTP20810 708 aaKnown RBP8.95□□□□□ -0.98
PHTF1-209ENST00000474926 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 RNF214Q8ND24 703 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 MPHOSPH8Q99549 860 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 USP19O94966 1318 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 BICD2Q8TD16 824 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 NLRP1Q9C000 1473 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 AATKQ6ZMQ8 1374 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 GRM8O00222 908 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 BLOC1S2Q6QNY1 142 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 CWC22Q9HCG8 908 aaKnown RBP8.94□□□□□ -0.98
PHTF1-209ENST00000474926 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 AEBP2Q6ZN18 517 aaPredicted RBP8.94□□□□□ -0.98
PHTF1-209ENST00000474926 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 GLI2P10070 1586 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 ATP7BP35670 1465 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 USP6P35125 1406 aa8.94□□□□□ -0.98
PHTF1-209ENST00000474926 LMTK2Q8IWU2 1503 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 KIDINS220Q9ULH0 1771 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 GOLGA6L6A8MZA4 724 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 KIAA2012Q0VF49 1180 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 METTL24Q5JXM2 366 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 SSFA2P28290 1259 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 LINS1Q8NG48 757 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 CIZ1Q9ULV3 898 aaPredicted RBP8.93□□□□□ -0.98
PHTF1-209ENST00000474926 ALKQ9UM73 1620 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 AKAP17AQ02040 695 aaKnown RBP8.93□□□□□ -0.98
PHTF1-209ENST00000474926 TRMT112Q9UI30 125 aaKnown RBP8.93□□□□□ -0.98
PHTF1-209ENST00000474926 DIP2CQ9Y2E4 1556 aa8.93□□□□□ -0.98
PHTF1-209ENST00000474926 PNMA6EA0A0J9YXQ4 647 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 RRP12Q5JTH9 1297 aaKnown RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 ZNF790Q6PG37 636 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 FBXW7Q969H0 707 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 SNRKQ9NRH2 765 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 IDH1O75874 414 aaKnown RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 ALDH1L1O75891 902 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 NBPF7P0C2Y1 421 aaPredicted RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 LMBR1LQ6UX01 489 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 NGLY1Q96IV0 654 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 DCAF5Q96JK2 942 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 ARHGEF10O15013 1369 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 IL2RBP14784 551 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 CEBPZQ03701 1054 aaKnown RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 IFIT5Q13325 482 aaKnown RBP8.92□□□□□ -0.98
PHTF1-209ENST00000474926 CHMP4CQ96CF2 233 aa8.92□□□□□ -0.98
PHTF1-209ENST00000474926 EIF4A1P60842 406 aaKnown RBP8.91□□□□□ -0.98
PHTF1-209ENST00000474926 TNPO1Q92973 898 aaKnown RBP8.91□□□□□ -0.98
PHTF1-209ENST00000474926 ACSBG1Q96GR2 724 aa8.91□□□□□ -0.98
PHTF1-209ENST00000474926 CCDC83Q8IWF9 413 aa8.91□□□□□ -0.98
PHTF1-209ENST00000474926 DDX21Q9NR30 783 aaKnown RBP eCLIP8.91□□□□□ -0.98
PHTF1-209ENST00000474926 NRDCO43847 1150 aa8.91□□□□□ -0.98
PHTF1-209ENST00000474926 TRIM29Q14134 588 aa8.91□□□□□ -0.98
PHTF1-209ENST00000474926 LARP1BQ659C4 914 aaKnown RBP8.91□□□□□ -0.98
PHTF1-209ENST00000474926 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.91□□□□□ -0.98
PHTF1-209ENST00000474926 ABCC4O15439 1325 aa8.91□□□□□ -0.98
PHTF1-209ENST00000474926 MRE11P49959 708 aa8.91□□□□□ -0.98
PHTF1-209ENST00000474926 KLHDC4Q8TBB5 520 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 ZNF496Q96IT1 587 aaPredicted RBP8.9□□□□□ -0.98
PHTF1-209ENST00000474926 ERICH2A1L162 156 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 GOLIM4O00461 696 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 ZNF853P0CG23 659 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 FERMT3Q86UX7 667 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 RASSF8Q8NHQ8 419 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 EVI5LQ96CN4 794 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 ESYT1Q9BSJ8 1104 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.9□□□□□ -0.98
PHTF1-209ENST00000474926 BTG4Q9NY30 223 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 SLAIN2Q9P270 581 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 MTMR7Q9Y216 660 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 IGSF1Q8N6C5 1336 aa8.9□□□□□ -0.98
PHTF1-209ENST00000474926 TULP4Q9NRJ4 1543 aa8.9□□□□□ -0.99
PHTF1-209ENST00000474926 NASPP49321 788 aaPredicted RBP8.9□□□□□ -0.99
PHTF1-209ENST00000474926 DDX46Q7L014 1031 aaKnown RBP8.9□□□□□ -0.99
PHTF1-209ENST00000474926 NOL10Q9BSC4 688 aaKnown RBP8.9□□□□□ -0.99
PHTF1-209ENST00000474926 WDR33Q9C0J8 1336 aaKnown RBP8.9□□□□□ -0.99
PHTF1-209ENST00000474926 TMEM94Q12767 1356 aa8.9□□□□□ -0.99
PHTF1-209ENST00000474926 PDCP20941 246 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 LDHAL6AQ6ZMR3 332 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 IL27Q8NEV9 243 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 DDX11Q96FC9 970 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 KIAA0232Q92628 1395 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 ARHGEF25Q86VW2 580 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 CREBRFQ8IUR6 639 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 PHF23Q9BUL5 403 aaPredicted RBP8.89□□□□□ -0.99
PHTF1-209ENST00000474926 BICC1Q9H694 974 aaKnown RBP8.89□□□□□ -0.99
PHTF1-209ENST00000474926 SOS1Q07889 1333 aaPredicted RBP8.89□□□□□ -0.99
PHTF1-209ENST00000474926 BECN2A8MW95 431 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 RAD21O60216 631 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 TCEANC2Q96MN5 208 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 BABAM1Q9NWV8 329 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 ABCF2Q9UG63 623 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 MBD3O95983 291 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms