RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 NBPF6Q5VWK0 638 aa26.22■■□□□ 1.79
SH3D21-202ENST00000474766 NBPF4Q96M43 638 aa26.22■■□□□ 1.79
SH3D21-202ENST00000474766 GBP4Q96PP9 640 aa26.21■■□□□ 1.79
SH3D21-202ENST00000474766 TRIM44Q96DX7 344 aaPredicted RBP26.21■■□□□ 1.79
SH3D21-202ENST00000474766 EYA1Q99502 592 aa26.21■■□□□ 1.79
SH3D21-202ENST00000474766 USHBP1Q8N6Y0 703 aa26.2■■□□□ 1.78
SH3D21-202ENST00000474766 SIRT2Q8IXJ6 389 aa26.19■■□□□ 1.78
SH3D21-202ENST00000474766 LNPKQ9C0E8 428 aa26.19■■□□□ 1.78
SH3D21-202ENST00000474766 KRT27Q7Z3Y8 459 aa26.18■■□□□ 1.78
SH3D21-202ENST00000474766 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
SH3D21-202ENST00000474766 ERBB4Q15303 1308 aa26.17■■□□□ 1.78
SH3D21-202ENST00000474766 ZMYND15Q9H091 742 aa26.17■■□□□ 1.78
SH3D21-202ENST00000474766 NCAPD2Q15021 1401 aa26.16■■□□□ 1.78
SH3D21-202ENST00000474766 IGSF1Q8N6C5 1336 aa26.16■■□□□ 1.78
SH3D21-202ENST00000474766 C1orf115Q9H7X2 142 aa26.16■■□□□ 1.78
SH3D21-202ENST00000474766 KDRP35968 1356 aa26.16■■□□□ 1.78
SH3D21-202ENST00000474766 SOCS7O14512 581 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 FAM182BQ5T319 152 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 MCM10Q7L590 875 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 MEGF6O75095 1541 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 IL2RBP14784 551 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 RAB3GAP1Q15042 981 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 BMP2KLQ5H9B9 411 aa26.15■■□□□ 1.78
SH3D21-202ENST00000474766 INTS3Q68E01 1043 aaKnown RBP26.15■■□□□ 1.78
SH3D21-202ENST00000474766 CDCA7Q9BWT1 371 aaPredicted RBP26.15■■□□□ 1.78
SH3D21-202ENST00000474766 TNPO1Q92973 898 aaKnown RBP26.14■■□□□ 1.77
SH3D21-202ENST00000474766 ANKRD45Q5TZF3 282 aa26.13■■□□□ 1.77
SH3D21-202ENST00000474766 DDB1Q16531 1140 aa26.12■■□□□ 1.77
SH3D21-202ENST00000474766 TNS2Q63HR2 1409 aa26.12■■□□□ 1.77
SH3D21-202ENST00000474766 IBTKQ9P2D0 1353 aaPredicted RBP26.12■■□□□ 1.77
SH3D21-202ENST00000474766 CCDC173Q0VFZ6 552 aa26.11■■□□□ 1.77
SH3D21-202ENST00000474766 KRT24Q2M2I5 525 aa26.11■■□□□ 1.77
SH3D21-202ENST00000474766 SHANK3Q9BYB0 1731 aa26.11■■□□□ 1.77
SH3D21-202ENST00000474766 PPP1R9BQ96SB3 815 aa26.1■■□□□ 1.77
SH3D21-202ENST00000474766 MTHFSDQ2M296 383 aaKnown RBP26.09■■□□□ 1.77
SH3D21-202ENST00000474766 PDCL3Q9H2J4 239 aa26.09■■□□□ 1.77
SH3D21-202ENST00000474766 OVOS2A0A0G2JMS6 1433 aa26.08■■□□□ 1.77
SH3D21-202ENST00000474766 PTPRCP08575 1304 aa26.08■■□□□ 1.77
SH3D21-202ENST00000474766 TERF1P54274 439 aa26.08■■□□□ 1.77
SH3D21-202ENST00000474766 CLEC17AQ6ZS10 378 aa26.08■■□□□ 1.77
SH3D21-202ENST00000474766 GAS2L3Q86XJ1 694 aa26.08■■□□□ 1.77
SH3D21-202ENST00000474766 EXOC5O00471 708 aa26.07■■□□□ 1.76
SH3D21-202ENST00000474766 HSP90AB1P08238 724 aaKnown RBP26.06■■□□□ 1.76
SH3D21-202ENST00000474766 MARCH10Q8NA82 808 aaPredicted RBP26.06■■□□□ 1.76
SH3D21-202ENST00000474766 UPF1Q92900 1129 aaKnown RBP eCLIP26.06■■□□□ 1.762e-6■■□□□ 12.5
SH3D21-202ENST00000474766 DCTPP1Q9H773 170 aa26.05■■□□□ 1.76
SH3D21-202ENST00000474766 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
SH3D21-202ENST00000474766 PKD1L3Q7Z443 1732 aa26.04■■□□□ 1.76
SH3D21-202ENST00000474766 ATP10DQ9P241 1426 aa26.04■■□□□ 1.76
SH3D21-202ENST00000474766 GAS2L2Q8NHY3 880 aa26.04■■□□□ 1.76
SH3D21-202ENST00000474766 RTF1Q92541 710 aaKnown RBP26.03■■□□□ 1.76
SH3D21-202ENST00000474766 SBF2Q86WG5 1849 aa26.03■■□□□ 1.76
SH3D21-202ENST00000474766 HTATSF1O43719 755 aaKnown RBP26.02■■□□□ 1.76
SH3D21-202ENST00000474766 TATP17735 454 aaPredicted RBP26.02■■□□□ 1.76
SH3D21-202ENST00000474766 ANKRD44Q8N8A2 993 aa26.02■■□□□ 1.76
SH3D21-202ENST00000474766 ZSCAN30Q86W11 494 aa26.02■■□□□ 1.76
SH3D21-202ENST00000474766 RPAP2Q8IXW5 612 aaPredicted RBP26.01■■□□□ 1.75
SH3D21-202ENST00000474766 GOLGA6L22H0YM25 854 aa26■■□□□ 1.75
SH3D21-202ENST00000474766 FAM196AQ6ZSG2 479 aa26■■□□□ 1.75
SH3D21-202ENST00000474766 ZCRB1Q8TBF4 217 aaKnown RBP26■■□□□ 1.75
SH3D21-202ENST00000474766 ANP32BQ92688 251 aaKnown RBP26■■□□□ 1.75
SH3D21-202ENST00000474766 SLC4A2P04920 1241 aa25.99■■□□□ 1.75
SH3D21-202ENST00000474766 HS1BP3Q53T59 392 aa25.99■■□□□ 1.75
SH3D21-202ENST00000474766 MIS18AQ9NYP9 233 aa25.99■■□□□ 1.75
SH3D21-202ENST00000474766 TSPYL4Q9UJ04 414 aa25.99■■□□□ 1.75
SH3D21-202ENST00000474766 TNS1Q9HBL0 1735 aaKnown RBP25.99■■□□□ 1.75
SH3D21-202ENST00000474766 OFD1O75665 1012 aa25.98■■□□□ 1.75
SH3D21-202ENST00000474766 KLHL40Q2TBA0 621 aa25.98■■□□□ 1.75
SH3D21-202ENST00000474766 DDX54Q8TDD1 881 aaKnown RBP25.98■■□□□ 1.75
SH3D21-202ENST00000474766 K7ELQ4 463 aaPredicted RBP25.97■■□□□ 1.75
SH3D21-202ENST00000474766 NASPP49321 788 aaPredicted RBP25.97■■□□□ 1.75
SH3D21-202ENST00000474766 CEP85Q6P2H3 762 aa25.97■■□□□ 1.75
SH3D21-202ENST00000474766 KIF2CQ99661 725 aa25.97■■□□□ 1.75
SH3D21-202ENST00000474766 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.97■■□□□ 1.75
SH3D21-202ENST00000474766 PLEKHM2Q8IWE5 1019 aa25.97■■□□□ 1.75
SH3D21-202ENST00000474766 TBC1D9Q6ZT07 1266 aa25.96■■□□□ 1.75
SH3D21-202ENST00000474766 BCL9O00512 1426 aa25.96■■□□□ 1.75
SH3D21-202ENST00000474766 KIAA1211Q6ZU35 1233 aa25.95■■□□□ 1.75
SH3D21-202ENST00000474766 TRIM37O94972 964 aa25.93■■□□□ 1.74
SH3D21-202ENST00000474766 MEIS3Q99687 375 aa25.93■■□□□ 1.74
SH3D21-202ENST00000474766 GNAT3A8MTJ3 354 aa25.93■■□□□ 1.74
SH3D21-202ENST00000474766 CYP27B1O15528 508 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 PCDH11XQ9BZA7 1347 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 PCDH11YQ9BZA8 1340 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 DOT1LQ8TEK3 1739 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 CDC45O75419 566 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 GSPT1P15170 499 aaKnown RBP25.92■■□□□ 1.74
SH3D21-202ENST00000474766 ZNF445P59923 1031 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 G2E3Q7L622 706 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 MAP7D2Q96T17 732 aa25.92■■□□□ 1.74
SH3D21-202ENST00000474766 KAT6BQ8WYB5 2073 aa25.91■■□□□ 1.74
SH3D21-202ENST00000474766 PLEKHG2Q9H7P9 1386 aa25.91■■□□□ 1.74
SH3D21-202ENST00000474766 NHSQ6T4R5 1651 aa25.91■■□□□ 1.74
SH3D21-202ENST00000474766 PTF1AQ7RTS3 328 aa25.91■■□□□ 1.74
SH3D21-202ENST00000474766 CCT4P50991 539 aaKnown RBP25.9■■□□□ 1.74
SH3D21-202ENST00000474766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.9■■□□□ 1.74
SH3D21-202ENST00000474766 MSNP26038 577 aaKnown RBP25.9■■□□□ 1.74
SH3D21-202ENST00000474766 BABAM1Q9NWV8 329 aa25.9■■□□□ 1.74
SH3D21-202ENST00000474766 SPG7Q9UQ90 795 aa25.9■■□□□ 1.74
SH3D21-202ENST00000474766 SOS1Q07889 1333 aaPredicted RBP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms