RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
NPAS2-208ENST00000474550 SETBP1Q9Y6X0 1596 aa12.16□□□□□ -0.46
NPAS2-208ENST00000474550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.16□□□□□ -0.46
NPAS2-208ENST00000474550 SERPINC1P01008 464 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
NPAS2-208ENST00000474550 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
NPAS2-208ENST00000474550 APPP05067 770 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 PPFIBP1Q86W92 1011 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 FEZ1Q99689 392 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
NPAS2-208ENST00000474550 SPG7Q9UQ90 795 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 PYM1Q9BRP8 204 aaKnown RBP12.15□□□□□ -0.46
NPAS2-208ENST00000474550 NPATQ14207 1427 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 FLIIQ13045 1269 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 FYB1O15117 783 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 PDE1AP54750 535 aa12.15□□□□□ -0.46
NPAS2-208ENST00000474550 STIM1Q13586 685 aa12.15□□□□□ -0.47
NPAS2-208ENST00000474550 SLC3A2P08195 630 aaKnown RBP12.14□□□□□ -0.47
NPAS2-208ENST00000474550 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 E9PCH4 1651 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 FAM69CQ0P6D2 419 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
NPAS2-208ENST00000474550 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 TMCO3Q6UWJ1 677 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 UBXN4Q92575 508 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 ZNHIT6Q9NWK9 470 aaKnown RBP12.14□□□□□ -0.47
NPAS2-208ENST00000474550 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 A0A1W2PP64 1363 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
NPAS2-208ENST00000474550 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
NPAS2-208ENST00000474550 PPIP5K1Q6PFW1 1433 aa12.14□□□□□ -0.47
NPAS2-208ENST00000474550 ASXL2Q76L83 1435 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
NPAS2-208ENST00000474550 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 MAP9Q49MG5 647 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 AKAP2Q9Y2D5 859 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 MADDQ8WXG6 1647 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 VAMP4O75379 141 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 CARD14Q9BXL6 1004 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 PES1O00541 588 aaKnown RBP12.13□□□□□ -0.47
NPAS2-208ENST00000474550 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 CEP89Q96ST8 783 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
NPAS2-208ENST00000474550 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 PPP1R9BQ96SB3 815 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 CCDC83Q8IWF9 413 aa12.13□□□□□ -0.47
NPAS2-208ENST00000474550 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
NPAS2-208ENST00000474550 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 RLBP1P12271 317 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 ZBTB7BO15156 539 aaPredicted RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
NPAS2-208ENST00000474550 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
NPAS2-208ENST00000474550 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 PDILTQ8N807 584 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 ERVK-7P63135 1459 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 IDI1Q13907 227 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 BMS1Q14692 1282 aaKnown RBP12.11□□□□□ -0.47
NPAS2-208ENST00000474550 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 TNNT1P13805 278 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 TTC39AQ5SRH9 613 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 ATP7BP35670 1465 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 TUBBP07437 444 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 CCDC196A0A1B0GTZ2 297 aa12.11□□□□□ -0.47
NPAS2-208ENST00000474550 PCMTD1Q96MG8 357 aaPredicted RBP12.11□□□□□ -0.47
NPAS2-208ENST00000474550 GJB2P29033 226 aa12.1□□□□□ -0.47
NPAS2-208ENST00000474550 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
NPAS2-208ENST00000474550 ZNF500O60304 480 aaPredicted RBP12.1□□□□□ -0.47
NPAS2-208ENST00000474550 LRRFIP2Q9Y608 721 aaKnown RBP12.1□□□□□ -0.47
NPAS2-208ENST00000474550 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
NPAS2-208ENST00000474550 F13A1P00488 732 aa12.1□□□□□ -0.47
NPAS2-208ENST00000474550 FAM193AP78312 1265 aa12.1□□□□□ -0.47
NPAS2-208ENST00000474550 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
NPAS2-208ENST00000474550 DNAJC2Q99543 621 aaKnown RBP12.1□□□□□ -0.47
NPAS2-208ENST00000474550 HOXB7P09629 217 aa12.09□□□□□ -0.47
NPAS2-208ENST00000474550 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms