RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 USPL1Q5W0Q7 1092 aa24.36■■□□□ 1.49
PDE6B-208ENST00000474251 ZBTB1Q9Y2K1 713 aa24.36■■□□□ 1.49
PDE6B-208ENST00000474251 ANKRD31Q8N7Z5 1873 aa24.36■■□□□ 1.49
PDE6B-208ENST00000474251 TM4SF1P30408 202 aa24.35■■□□□ 1.49
PDE6B-208ENST00000474251 KIF3CO14782 793 aa24.34■■□□□ 1.49
PDE6B-208ENST00000474251 ZPR1O75312 459 aa24.34■■□□□ 1.49
PDE6B-208ENST00000474251 VSIG10Q8N0Z9 540 aa24.34■■□□□ 1.49
PDE6B-208ENST00000474251 BCORQ6W2J9 1755 aa24.34■■□□□ 1.49
PDE6B-208ENST00000474251 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
PDE6B-208ENST00000474251 ARHGAP27Q6ZUM4 889 aa24.33■■□□□ 1.49
PDE6B-208ENST00000474251 U2SURPO15042 1029 aaKnown RBP24.32■■□□□ 1.48
PDE6B-208ENST00000474251 PIM2Q9P1W9 311 aa24.32■■□□□ 1.48
PDE6B-208ENST00000474251 NARFQ9UHQ1 456 aa24.32■■□□□ 1.48
PDE6B-208ENST00000474251 CACNA1SQ13698 1873 aa24.31■■□□□ 1.48
PDE6B-208ENST00000474251 GAS2L2Q8NHY3 880 aa24.31■■□□□ 1.48
PDE6B-208ENST00000474251 TNRC6CQ9HCJ0 1690 aaKnown RBP24.3■■□□□ 1.48
PDE6B-208ENST00000474251 DLG5Q8TDM6 1919 aa24.3■■□□□ 1.48
PDE6B-208ENST00000474251 CHRNA5P30532 468 aa24.29■■□□□ 1.48
PDE6B-208ENST00000474251 NFIXQ14938 502 aa24.29■■□□□ 1.48
PDE6B-208ENST00000474251 TTC5Q8N0Z6 440 aa24.29■■□□□ 1.48
PDE6B-208ENST00000474251 IL17REQ8NFR9 667 aa24.29■■□□□ 1.48
PDE6B-208ENST00000474251 BCL2L12Q9HB09 334 aa24.29■■□□□ 1.48
PDE6B-208ENST00000474251 COL11A2P13942 1736 aaPredicted RBP24.29■■□□□ 1.48
PDE6B-208ENST00000474251 TIAM2Q8IVF5 1701 aa24.28■■□□□ 1.48
PDE6B-208ENST00000474251 GNAT3A8MTJ3 354 aa24.28■■□□□ 1.48
PDE6B-208ENST00000474251 HSPA6P17066 643 aa24.28■■□□□ 1.48
PDE6B-208ENST00000474251 DALRD3Q5D0E6 543 aaKnown RBP24.28■■□□□ 1.48
PDE6B-208ENST00000474251 HEG1Q9ULI3 1381 aa24.28■■□□□ 1.48
PDE6B-208ENST00000474251 CEMIPQ8WUJ3 1361 aa24.27■■□□□ 1.48
PDE6B-208ENST00000474251 DICER1Q9UPY3 1922 aaKnown RBP24.26■■□□□ 1.47
PDE6B-208ENST00000474251 TEFQ10587 303 aa24.26■■□□□ 1.47
PDE6B-208ENST00000474251 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
PDE6B-208ENST00000474251 ZNF496Q96IT1 587 aaPredicted RBP24.26■■□□□ 1.47
PDE6B-208ENST00000474251 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
PDE6B-208ENST00000474251 C9orf131Q5VYM1 1079 aa24.25■■□□□ 1.47
PDE6B-208ENST00000474251 STARD3NLO95772 234 aa24.24■■□□□ 1.47
PDE6B-208ENST00000474251 EIF5P55010 431 aaKnown RBP24.24■■□□□ 1.47
PDE6B-208ENST00000474251 RSPH6AQ9H0K4 717 aa24.24■■□□□ 1.47
PDE6B-208ENST00000474251 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
PDE6B-208ENST00000474251 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
PDE6B-208ENST00000474251 FER1L6Q2WGJ9 1857 aa24.24■■□□□ 1.47
PDE6B-208ENST00000474251 PRKAR2BP31323 418 aa24.23■■□□□ 1.47
PDE6B-208ENST00000474251 WDR90Q96KV7 1748 aa24.23■■□□□ 1.47
PDE6B-208ENST00000474251 LAMB4A4D0S4 1761 aa24.22■■□□□ 1.47
PDE6B-208ENST00000474251 SERPINB2P05120 415 aa24.22■■□□□ 1.47
PDE6B-208ENST00000474251 PHACTR3Q96KR7 559 aa24.22■■□□□ 1.47
PDE6B-208ENST00000474251 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
PDE6B-208ENST00000474251 NMRK2Q9NPI5 230 aa24.22■■□□□ 1.47
PDE6B-208ENST00000474251 A0A087WZG4 1122 aa24.2■■□□□ 1.46
PDE6B-208ENST00000474251 TEX13AQ9BXU3 409 aaPredicted RBP24.19■■□□□ 1.46
PDE6B-208ENST00000474251 RNF181Q9P0P0 153 aa24.19■■□□□ 1.46
PDE6B-208ENST00000474251 TOMM70O94826 608 aa24.18■■□□□ 1.46
PDE6B-208ENST00000474251 FMNL2Q96PY5 1086 aa24.18■■□□□ 1.46
PDE6B-208ENST00000474251 KCNQ3O43525 872 aa24.17■■□□□ 1.46
PDE6B-208ENST00000474251 PPP2R1AP30153 589 aa24.17■■□□□ 1.46
PDE6B-208ENST00000474251 BICDL1Q6ZP65 573 aa24.17■■□□□ 1.46
PDE6B-208ENST00000474251 KDM3BQ7LBC6 1761 aa24.16■■□□□ 1.46
PDE6B-208ENST00000474251 IL6STP40189 918 aaPredicted RBP24.16■■□□□ 1.46
PDE6B-208ENST00000474251 TBC1D9BQ66K14 1250 aa24.16■■□□□ 1.46
PDE6B-208ENST00000474251 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
PDE6B-208ENST00000474251 SLX4Q8IY92 1834 aa24.15■■□□□ 1.46
PDE6B-208ENST00000474251 BTBD11A6QL63 1104 aa24.15■■□□□ 1.46
PDE6B-208ENST00000474251 RASSF7Q02833 373 aa24.15■■□□□ 1.46
PDE6B-208ENST00000474251 ZNF330Q9Y3S2 320 aaPredicted RBP24.15■■□□□ 1.46
PDE6B-208ENST00000474251 C2CD5Q86YS7 1000 aa24.14■■□□□ 1.45
PDE6B-208ENST00000474251 TBC1D2BQ9UPU7 963 aa24.14■■□□□ 1.45
PDE6B-208ENST00000474251 A1BGP04217 495 aa24.13■■□□□ 1.45
PDE6B-208ENST00000474251 U2AF1L5P0DN76 240 aaPredicted RBP24.13■■□□□ 1.45
PDE6B-208ENST00000474251 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.45
PDE6B-208ENST00000474251 TTLL6Q8N841 843 aa24.13■■□□□ 1.45
PDE6B-208ENST00000474251 KDM2BQ8NHM5 1336 aa24.12■■□□□ 1.45
PDE6B-208ENST00000474251 ZC3H4Q9UPT8 1303 aaKnown RBP24.11■■□□□ 1.45
PDE6B-208ENST00000474251 H0YIN7 160 aa24.11■■□□□ 1.45
PDE6B-208ENST00000474251 CAMTA2O94983 1202 aa24.11■■□□□ 1.45
PDE6B-208ENST00000474251 APLP1P51693 650 aa24.11■■□□□ 1.45
PDE6B-208ENST00000474251 PRELPP51888 382 aa24.11■■□□□ 1.45
PDE6B-208ENST00000474251 RBM46Q8TBY0 533 aaKnown RBP24.11■■□□□ 1.45
PDE6B-208ENST00000474251 NUP98P52948 1817 aa24.11■■□□□ 1.45
PDE6B-208ENST00000474251 PRR5LQ6MZQ0 368 aa24.1■■□□□ 1.45
PDE6B-208ENST00000474251 MCM10Q7L590 875 aa24.1■■□□□ 1.45
PDE6B-208ENST00000474251 PRAMEF22A3QJZ6 481 aa24.09■■□□□ 1.45
PDE6B-208ENST00000474251 USP16Q9Y5T5 823 aa24.09■■□□□ 1.45
PDE6B-208ENST00000474251 LMNB1P20700 586 aa24.08■■□□□ 1.45
PDE6B-208ENST00000474251 RTF1Q92541 710 aaKnown RBP24.08■■□□□ 1.45
PDE6B-208ENST00000474251 BRIP1Q9BX63 1249 aa24.08■■□□□ 1.45
PDE6B-208ENST00000474251 NFKBIEO00221 500 aa24.07■■□□□ 1.44
PDE6B-208ENST00000474251 DZIP3Q86Y13 1208 aaKnown RBP24.07■■□□□ 1.44
PDE6B-208ENST00000474251 C16orf71Q8IYS4 520 aaPredicted RBP24.07■■□□□ 1.44
PDE6B-208ENST00000474251 PDZRN3Q9UPQ7 1066 aa24.07■■□□□ 1.44
PDE6B-208ENST00000474251 PDE6BP35913 854 aa24.06■■□□□ 1.44
PDE6B-208ENST00000474251 PIP4K2AP48426 406 aaPredicted RBP24.06■■□□□ 1.44
PDE6B-208ENST00000474251 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
PDE6B-208ENST00000474251 NPM2Q86SE8 214 aaKnown RBP24.06■■□□□ 1.44
PDE6B-208ENST00000474251 CCDC24Q8N4L8 307 aa24.06■■□□□ 1.44
PDE6B-208ENST00000474251 RRAGCQ9HB90 399 aa24.06■■□□□ 1.44
PDE6B-208ENST00000474251 CNBD1Q8NA66 436 aa24.05■■□□□ 1.44
PDE6B-208ENST00000474251 SETDB2Q96T68 719 aa24.05■■□□□ 1.44
PDE6B-208ENST00000474251 HTATSF1O43719 755 aaKnown RBP24.04■■□□□ 1.44
PDE6B-208ENST00000474251 SNRPA1P09661 255 aaKnown RBP24.04■■□□□ 1.44
PDE6B-208ENST00000474251 ZNF622Q969S3 477 aaKnown RBP eCLIP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms