RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 SLC4A9Q96Q91 983 aa8.01□□□□□ -1.13
UBE3C-206ENST00000474153 SLC52A2Q9HAB3 445 aa8.01□□□□□ -1.13
UBE3C-206ENST00000474153 NMRK2Q9NPI5 230 aa8.01□□□□□ -1.13
UBE3C-206ENST00000474153 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
UBE3C-206ENST00000474153 ASAP1Q9ULH1 1129 aa8.01□□□□□ -1.13
UBE3C-206ENST00000474153 KDM2BQ8NHM5 1336 aa8.01□□□□□ -1.13
UBE3C-206ENST00000474153 PRKAR2BP31323 418 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 ITPK1Q13572 414 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 RC3H1Q5TC82 1133 aaKnown RBP8□□□□□ -1.13
UBE3C-206ENST00000474153 SMIM5Q71RC9 77 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 NUDCQ9Y266 331 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 C10orf71Q711Q0 1435 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 SBF1O95248 1867 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 CCDC88AQ3V6T2 1871 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 CNTNAP4Q9C0A0 1308 aa8□□□□□ -1.13
UBE3C-206ENST00000474153 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
UBE3C-206ENST00000474153 GNAT3A8MTJ3 354 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 U2SURPO15042 1029 aaKnown RBP7.99□□□□□ -1.13
UBE3C-206ENST00000474153 HTATSF1O43719 755 aaKnown RBP7.99□□□□□ -1.13
UBE3C-206ENST00000474153 DPEP1P16444 411 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 RFC4P35249 363 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 COL13A1Q5TAT6 717 aaPredicted RBP7.99□□□□□ -1.13
UBE3C-206ENST00000474153 C9orf131Q5VYM1 1079 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 LGR6Q9HBX8 967 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 PIM2Q9P1W9 311 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
UBE3C-206ENST00000474153 DICER1Q9UPY3 1922 aaKnown RBP7.98□□□□□ -1.13
UBE3C-206ENST00000474153 LAMB2P55268 1798 aa7.98□□□□□ -1.13
UBE3C-206ENST00000474153 RPS6KA4O75676 772 aa7.98□□□□□ -1.13
UBE3C-206ENST00000474153 GYS1P13807 737 aa7.98□□□□□ -1.13
UBE3C-206ENST00000474153 KCNA3P22001 575 aa7.98□□□□□ -1.13
UBE3C-206ENST00000474153 TNS4Q8IZW8 715 aa7.98□□□□□ -1.13
UBE3C-206ENST00000474153 IL17REQ8NFR9 667 aa7.98□□□□□ -1.13
UBE3C-206ENST00000474153 ARHGEF1Q92888 912 aaKnown RBP7.98□□□□□ -1.13
UBE3C-206ENST00000474153 COL11A2P13942 1736 aaPredicted RBP7.98□□□□□ -1.13
UBE3C-206ENST00000474153 HEG1Q9ULI3 1381 aa7.97□□□□□ -1.13
UBE3C-206ENST00000474153 U2AF1L5P0DN76 240 aaPredicted RBP7.97□□□□□ -1.13
UBE3C-206ENST00000474153 PRELPP51888 382 aa7.97□□□□□ -1.13
UBE3C-206ENST00000474153 CABP4P57796 275 aa7.97□□□□□ -1.13
UBE3C-206ENST00000474153 U2AF1Q01081 240 aaKnown RBP eCLIP7.97□□□□□ -1.13
UBE3C-206ENST00000474153 DALRD3Q5D0E6 543 aaKnown RBP7.97□□□□□ -1.13
UBE3C-206ENST00000474153 VSIG10Q8N0Z9 540 aa7.97□□□□□ -1.13
UBE3C-206ENST00000474153 SMC1BQ8NDV3 1235 aa7.97□□□□□ -1.13
UBE3C-206ENST00000474153 TNRC6CQ9HCJ0 1690 aaKnown RBP7.97□□□□□ -1.13
UBE3C-206ENST00000474153 ZC3H4Q9UPT8 1303 aaKnown RBP7.97□□□□□ -1.13
UBE3C-206ENST00000474153 RRAGCQ9HB90 399 aa7.96□□□□□ -1.14
UBE3C-206ENST00000474153 MYH3P11055 1940 aa7.95□□□□□ -1.14
UBE3C-206ENST00000474153 HTRA3P83110 453 aa7.95□□□□□ -1.14
UBE3C-206ENST00000474153 CNGB1Q14028 1251 aaPredicted RBP7.95□□□□□ -1.14
UBE3C-206ENST00000474153 ZNF790Q6PG37 636 aa7.95□□□□□ -1.14
UBE3C-206ENST00000474153 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
UBE3C-206ENST00000474153 PNNQ9H307 717 aaKnown RBP7.95□□□□□ -1.14
UBE3C-206ENST00000474153 RNF181Q9P0P0 153 aa7.95□□□□□ -1.14
UBE3C-206ENST00000474153 FER1L6Q2WGJ9 1857 aa7.95□□□□□ -1.14
UBE3C-206ENST00000474153 CAPN15O75808 1086 aa7.94□□□□□ -1.14
UBE3C-206ENST00000474153 NFE2L2Q16236 605 aa7.94□□□□□ -1.14
UBE3C-206ENST00000474153 DDX60Q8IY21 1712 aaKnown RBP7.93□□□□□ -1.14
UBE3C-206ENST00000474153 CYP19A1P11511 503 aaPredicted RBP7.93□□□□□ -1.14
UBE3C-206ENST00000474153 VEGFAP15692 232 aaPredicted RBP7.93□□□□□ -1.14
UBE3C-206ENST00000474153 SLC39A6Q13433 755 aa7.93□□□□□ -1.14
UBE3C-206ENST00000474153 INTS5Q6P9B9 1019 aaKnown RBP7.93□□□□□ -1.14
UBE3C-206ENST00000474153 SOS1Q07889 1333 aaPredicted RBP7.93□□□□□ -1.14
UBE3C-206ENST00000474153 USP42Q9H9J4 1324 aaKnown RBP7.93□□□□□ -1.14
UBE3C-206ENST00000474153 COL15A1P39059 1388 aa7.93□□□□□ -1.14
UBE3C-206ENST00000474153 GLTPD2A6NH11 291 aa7.92□□□□□ -1.14
UBE3C-206ENST00000474153 HSPA1AP0DMV8 641 aaKnown RBP7.92□□□□□ -1.14
UBE3C-206ENST00000474153 HSPA1BP0DMV9 641 aaKnown RBP7.92□□□□□ -1.14
UBE3C-206ENST00000474153 LMNB1P20700 586 aa7.92□□□□□ -1.14
UBE3C-206ENST00000474153 TMPOP42166 694 aaKnown RBP7.92□□□□□ -1.14
UBE3C-206ENST00000474153 CRKLP46109 303 aaKnown RBP7.92□□□□□ -1.14
UBE3C-206ENST00000474153 TEFQ10587 303 aa7.92□□□□□ -1.14
UBE3C-206ENST00000474153 NCBP3Q53F19 620 aaKnown RBP7.92□□□□□ -1.14
UBE3C-206ENST00000474153 ZNF496Q96IT1 587 aaPredicted RBP7.92□□□□□ -1.14
UBE3C-206ENST00000474153 BABAM1Q9NWV8 329 aa7.92□□□□□ -1.14
UBE3C-206ENST00000474153 PTCD1O75127 700 aaKnown RBP7.91□□□□□ -1.14
UBE3C-206ENST00000474153 ZPR1O75312 459 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 TM4SF1P30408 202 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 CHRNA5P30532 468 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 DDR1Q08345 913 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 FKBP8Q14318 412 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 DPY19L2Q6NUT2 758 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 MCM10Q7L590 875 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 RUNDC1Q96C34 613 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 ADAMTS8Q9UP79 889 aa7.91□□□□□ -1.14
UBE3C-206ENST00000474153 MAPK8IP3Q9UPT6 1336 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 BTBD11A6QL63 1104 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 POLRMTO00411 1230 aaKnown RBP7.9□□□□□ -1.14
UBE3C-206ENST00000474153 KCNQ3O43525 872 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 DCTN1Q14203 1278 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 TAF7Q15545 349 aaPredicted RBP7.9□□□□□ -1.14
UBE3C-206ENST00000474153 CCDC184Q52MB2 194 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 RTF1Q92541 710 aaKnown RBP7.9□□□□□ -1.14
UBE3C-206ENST00000474153 FMNL2Q96PY5 1086 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 TEX13AQ9BXU3 409 aaPredicted RBP7.9□□□□□ -1.14
UBE3C-206ENST00000474153 SRP68Q9UHB9 627 aaKnown RBP7.9□□□□□ -1.14
UBE3C-206ENST00000474153 TRIM35Q9UPQ4 493 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 ZBTB1Q9Y2K1 713 aa7.9□□□□□ -1.14
UBE3C-206ENST00000474153 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms