RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ARHGEF1Q92888 912 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-204ENST00000474025 WDR90Q96KV7 1748 aa7.14□□□□□ -1.27
SNRNP40-204ENST00000474025 KDM6AO15550 1401 aaPredicted RBP7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 CNTNAP4Q9C0A0 1308 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 FCHSD2O94868 740 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 SLC34A2O95436 690 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 FSTL1Q12841 308 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 TRAPPC3LQ5T215 181 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 C9orf131Q5VYM1 1079 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 RBM46Q8TBY0 533 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 KLRG1Q96E93 195 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 CCDC87Q9NVE4 849 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 POLKQ9UBT6 870 aa7.13□□□□□ -1.27
SNRNP40-204ENST00000474025 KCPQ6ZWJ8 1503 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 MYH14Q7Z406 1995 aaKnown RBP7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 ERVV-2B6SEH9 535 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 RPS6KA4O75676 772 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 RFC4P35249 363 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 HTRA3P83110 453 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 EIF4A2Q14240 407 aaKnown RBP7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 COL13A1Q5TAT6 717 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 PLCD3Q8N3E9 789 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 DCAF5Q96JK2 942 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 PARP3Q9Y6F1 533 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 ARFGEF1Q9Y6D6 1849 aa7.12□□□□□ -1.27
SNRNP40-204ENST00000474025 DDR1Q08345 913 aa7.11□□□□□ -1.27
SNRNP40-204ENST00000474025 TSPYL2Q9H2G4 693 aaPredicted RBP7.11□□□□□ -1.27
SNRNP40-204ENST00000474025 ZBTB47Q9UFB7 747 aaPredicted RBP7.11□□□□□ -1.27
SNRNP40-204ENST00000474025 KDM2BQ8NHM5 1336 aa7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 USP42Q9H9J4 1324 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 HSP90AB1P08238 724 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 CRKLP46109 303 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 DALRD3Q5D0E6 543 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 RNF181Q9P0P0 153 aa7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 PIM2Q9P1W9 311 aa7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 SRP68Q9UHB9 627 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-204ENST00000474025 TNRC6CQ9HCJ0 1690 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 ADAMTS7Q9UKP4 1686 aa7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 PTCD1O75127 700 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 CABP4P57796 275 aa7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 ZNF530Q6P9A1 599 aaPredicted RBP7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 MS4A3Q96HJ5 214 aa7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 TJP1Q07157 1748 aa7.09□□□□□ -1.27
SNRNP40-204ENST00000474025 ZC3H4Q9UPT8 1303 aaKnown RBP7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 POLRMTO00411 1230 aaKnown RBP7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 CHRNA5P30532 468 aa7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 TNNT2P45379 298 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 AMOTQ4VCS5 1084 aa7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 PLEKHO1Q53GL0 409 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 ASTLQ6HA08 431 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 AEBP1Q8IUX7 1158 aa7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 RASEFQ8IZ41 740 aa7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 KIF12Q96FN5 646 aa7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
SNRNP40-204ENST00000474025 SBF1O95248 1867 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 TM4SF1P30408 202 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 MTHFSP49914 203 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 RASSF7Q02833 373 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 INTS5Q6P9B9 1019 aaKnown RBP7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 NFATC2IPQ8NCF5 419 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 SMC1BQ8NDV3 1235 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 FBXO3Q9UK99 471 aa7.07□□□□□ -1.28
SNRNP40-204ENST00000474025 SOS1Q07889 1333 aaPredicted RBP7.06□□□□□ -1.28
SNRNP40-204ENST00000474025 C1orf141Q5JVX7 400 aa7.06□□□□□ -1.28
SNRNP40-204ENST00000474025 NRXN2Q9P2S2 1712 aa7.06□□□□□ -1.28
SNRNP40-204ENST00000474025 MRC1P22897 1456 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 GLTPD2A6NH11 291 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 ATMINO43313 823 aaPredicted RBP7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 ZPR1O75312 459 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 LMNB1P20700 586 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 NUBP1P53384 320 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 NFIXQ14938 502 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 USPL1Q5W0Q7 1092 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 DNAJC10Q8IXB1 793 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 COL15A1P39059 1388 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 SCN11AQ9UI33 1791 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 DLEC1Q9Y238 1755 aa7.05□□□□□ -1.28
SNRNP40-204ENST00000474025 TIAM2Q8IVF5 1701 aa7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 AFDNP55196 1824 aaKnown RBP7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 NFKBIEO00221 500 aa7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 HSPA1AP0DMV8 641 aaKnown RBP7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 HSPA1BP0DMV9 641 aaKnown RBP7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 CYP19A1P11511 503 aaPredicted RBP7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 VEGFAP15692 232 aaPredicted RBP7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 SULT6B1Q6IMI4 303 aa7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 POLR3GLQ9BT43 218 aa7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 SLC52A2Q9HAB3 445 aa7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 CARMIL3Q8ND23 1372 aa7.04□□□□□ -1.28
SNRNP40-204ENST00000474025 AKAP4Q5JQC9 854 aa7.03□□□□□ -1.28
SNRNP40-204ENST00000474025 TTLL6Q8N841 843 aa7.03□□□□□ -1.28
SNRNP40-204ENST00000474025 PANK3Q9H999 370 aa7.03□□□□□ -1.28
SNRNP40-204ENST00000474025 BCL2L12Q9HB09 334 aa7.03□□□□□ -1.28
SNRNP40-204ENST00000474025 NARFQ9UHQ1 456 aa7.03□□□□□ -1.28
SNRNP40-204ENST00000474025 ZBTB1Q9Y2K1 713 aa7.03□□□□□ -1.28
SNRNP40-204ENST00000474025 POTECB2RU33 542 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 MAP3K13O43283 966 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 SERPINB2P05120 415 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 IL13P35225 146 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 SLC39A6Q13433 755 aa7.02□□□□□ -1.29
SNRNP40-204ENST00000474025 SLC39A7Q92504 469 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms