RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PAPPAQ13219 1627 aa22.55■■□□□ 1.2
VARS2-206ENST00000473916 DISP2A7MBM2 1401 aa22.55■■□□□ 1.2
VARS2-206ENST00000473916 DCTPP1Q9H773 170 aa22.55■■□□□ 1.2
VARS2-206ENST00000473916 CHMP4AQ9BY43 222 aa22.54■■□□□ 1.2
VARS2-206ENST00000473916 BCL11AQ9H165 835 aa22.54■■□□□ 1.2
VARS2-206ENST00000473916 LAMB4A4D0S4 1761 aa22.54■■□□□ 1.2
VARS2-206ENST00000473916 SEC24BO95487 1268 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 GNAI2P04899 355 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 MYL6BP14649 208 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 BEND3Q5T5X7 828 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
VARS2-206ENST00000473916 UBAP1LF5GYI3 381 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 AIMP1Q12904 312 aaKnown RBP22.53■■□□□ 1.2
VARS2-206ENST00000473916 SRCIN1Q9C0H9 1055 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 MAP3K2Q9Y2U5 619 aa22.53■■□□□ 1.2
VARS2-206ENST00000473916 LRRFIP2Q9Y608 721 aaKnown RBP22.53■■□□□ 1.2
VARS2-206ENST00000473916 ERVV-2B6SEH9 535 aa22.52■■□□□ 1.2
VARS2-206ENST00000473916 SNRPA1P09661 255 aaKnown RBP22.52■■□□□ 1.2
VARS2-206ENST00000473916 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
VARS2-206ENST00000473916 KAT6BQ8WYB5 2073 aa22.52■■□□□ 1.2
VARS2-206ENST00000473916 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.19
VARS2-206ENST00000473916 HYPKQ9NX55 129 aa22.52■■□□□ 1.19
VARS2-206ENST00000473916 ITGB4P16144 1822 aa22.51■■□□□ 1.19
VARS2-206ENST00000473916 APBB1O00213 710 aa22.51■■□□□ 1.19
VARS2-206ENST00000473916 GNAI3P08754 354 aa22.51■■□□□ 1.19
VARS2-206ENST00000473916 PNMA6EA0A0J9YXQ4 647 aa22.5■■□□□ 1.19
VARS2-206ENST00000473916 NBPF7P0C2Y1 421 aaPredicted RBP22.5■■□□□ 1.19
VARS2-206ENST00000473916 KSR2Q6VAB6 950 aa22.49■■□□□ 1.19
VARS2-206ENST00000473916 SMARCA5O60264 1052 aaPredicted RBP22.48■■□□□ 1.19
VARS2-206ENST00000473916 UBTFL1P0CB47 393 aaPredicted RBP22.48■■□□□ 1.19
VARS2-206ENST00000473916 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
VARS2-206ENST00000473916 XAGE3Q8WTP9 111 aa22.48■■□□□ 1.19
VARS2-206ENST00000473916 PTCD1O75127 700 aaKnown RBP22.47■■□□□ 1.19
VARS2-206ENST00000473916 CWF19L2Q2TBE0 894 aaKnown RBP22.47■■□□□ 1.19
VARS2-206ENST00000473916 C16orf71Q8IYS4 520 aaPredicted RBP22.47■■□□□ 1.19
VARS2-206ENST00000473916 COPS6Q7L5N1 327 aa22.46■■□□□ 1.19
VARS2-206ENST00000473916 OTUD7AQ8TE49 926 aaPredicted RBP22.46■■□□□ 1.19
VARS2-206ENST00000473916 TNS2Q63HR2 1409 aa22.46■■□□□ 1.19
VARS2-206ENST00000473916 EXOC6BQ9Y2D4 811 aa22.45■■□□□ 1.18
VARS2-206ENST00000473916 HMMRO75330 724 aa22.45■■□□□ 1.18
VARS2-206ENST00000473916 ATP8B2P98198 1209 aa22.45■■□□□ 1.18
VARS2-206ENST00000473916 TMOD3Q9NYL9 352 aa22.44■■□□□ 1.18
VARS2-206ENST00000473916 PIGBQ92521 554 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 IPO9Q96P70 1041 aaKnown RBP22.43■■□□□ 1.18
VARS2-206ENST00000473916 ARFGEF2Q9Y6D5 1785 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 SPATA31A1Q5TZJ5 1347 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 NBPF26B4DH59 902 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 NBPF10Q6P3W6 841 aaKnown RBP22.43■■□□□ 1.18
VARS2-206ENST00000473916 NBPF15Q8N660 670 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 NWD2Q9ULI1 1742 aa22.43■■□□□ 1.18
VARS2-206ENST00000473916 DDX58O95786 925 aaKnown RBP22.41■■□□□ 1.18
VARS2-206ENST00000473916 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
VARS2-206ENST00000473916 PLEKHM2Q8IWE5 1019 aa22.41■■□□□ 1.18
VARS2-206ENST00000473916 SLIT2O94813 1529 aa22.41■■□□□ 1.18
VARS2-206ENST00000473916 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
VARS2-206ENST00000473916 IGKV5-2P06315 115 aa22.41■■□□□ 1.18
VARS2-206ENST00000473916 AFDNP55196 1824 aaKnown RBP22.41■■□□□ 1.18
VARS2-206ENST00000473916 EXOC5O00471 708 aa22.4■■□□□ 1.18
VARS2-206ENST00000473916 A1BGP04217 495 aa22.4■■□□□ 1.18
VARS2-206ENST00000473916 PPP1R42Q7Z4L9 355 aa22.4■■□□□ 1.18
VARS2-206ENST00000473916 ALDH1L1O75891 902 aa22.4■■□□□ 1.18
VARS2-206ENST00000473916 LINS1Q8NG48 757 aa22.39■■□□□ 1.17
VARS2-206ENST00000473916 C9orf78Q9NZ63 289 aaPredicted RBP22.38■■□□□ 1.17
VARS2-206ENST00000473916 BMP2KLQ5H9B9 411 aa22.38■■□□□ 1.17
VARS2-206ENST00000473916 ANKRD13DQ6ZTN6 518 aa22.38■■□□□ 1.17
VARS2-206ENST00000473916 SSH3Q8TE77 659 aa22.38■■□□□ 1.17
VARS2-206ENST00000473916 MYD88Q99836 296 aa22.38■■□□□ 1.17
VARS2-206ENST00000473916 ATG3Q9NT62 314 aa22.38■■□□□ 1.17
VARS2-206ENST00000473916 SPATA31A5Q5VU36 1347 aa22.37■■□□□ 1.17
VARS2-206ENST00000473916 SPATA31A7Q8IWB4 1347 aa22.37■■□□□ 1.17
VARS2-206ENST00000473916 LRP6O75581 1613 aa22.37■■□□□ 1.17
VARS2-206ENST00000473916 GSPT1P15170 499 aaKnown RBP22.37■■□□□ 1.17
VARS2-206ENST00000473916 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.37■■□□□ 1.17
VARS2-206ENST00000473916 CCDC9Q9Y3X0 531 aaKnown RBP22.37■■□□□ 1.17
VARS2-206ENST00000473916 NUP188Q5SRE5 1749 aa22.37■■□□□ 1.17
VARS2-206ENST00000473916 ZBTB47Q9UFB7 747 aaPredicted RBP22.36■■□□□ 1.17
VARS2-206ENST00000473916 IBTKQ9P2D0 1353 aaPredicted RBP22.36■■□□□ 1.17
VARS2-206ENST00000473916 BCL9O00512 1426 aa22.36■■□□□ 1.17
VARS2-206ENST00000473916 SRGAP3O43295 1099 aa22.36■■□□□ 1.17
VARS2-206ENST00000473916 POLA2Q14181 598 aa22.36■■□□□ 1.17
VARS2-206ENST00000473916 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
VARS2-206ENST00000473916 METTL22Q9BUU2 404 aaPredicted RBP22.36■■□□□ 1.17
VARS2-206ENST00000473916 NEURL1BA8MQ27 555 aa22.35■■□□□ 1.17
VARS2-206ENST00000473916 C8orf37Q96NL8 207 aa22.35■■□□□ 1.17
VARS2-206ENST00000473916 GRM8O00222 908 aa22.35■■□□□ 1.17
VARS2-206ENST00000473916 TTLL7Q6ZT98 887 aa22.35■■□□□ 1.17
VARS2-206ENST00000473916 KAZALD1Q96I82 304 aa22.35■■□□□ 1.17
VARS2-206ENST00000473916 SUCLG2Q96I99 432 aa22.35■■□□□ 1.17
VARS2-206ENST00000473916 JARID2Q92833 1246 aaPredicted RBP22.34■■□□□ 1.17
VARS2-206ENST00000473916 DDB1Q16531 1140 aa22.33■■□□□ 1.17
VARS2-206ENST00000473916 DNAJC10Q8IXB1 793 aa22.33■■□□□ 1.17
VARS2-206ENST00000473916 JCADQ9P266 1359 aa22.33■■□□□ 1.17
VARS2-206ENST00000473916 ATP5J2-PTCD1G3V325 749 aa22.33■■□□□ 1.16
VARS2-206ENST00000473916 PRIM1P49642 420 aaKnown RBP22.33■■□□□ 1.16
VARS2-206ENST00000473916 RBM42Q9BTD8 480 aaKnown RBP22.33■■□□□ 1.16
VARS2-206ENST00000473916 THRAP3Q9Y2W1 955 aaKnown RBP22.33■■□□□ 1.16
VARS2-206ENST00000473916 MFAP1P55081 439 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms