RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MS4A1P11836 297 aa18.78■□□□□ 0.6
LMNA-213ENST00000473598 TRIM27P14373 513 aa18.78■□□□□ 0.6
LMNA-213ENST00000473598 PANK1Q8TE04 598 aa18.78■□□□□ 0.6
LMNA-213ENST00000473598 ARHGAP45Q92619 1136 aa18.78■□□□□ 0.6
LMNA-213ENST00000473598 GLIPR1L2Q4G1C9 344 aa18.78■□□□□ 0.6
LMNA-213ENST00000473598 CCDC30Q5VVM6 783 aa18.78■□□□□ 0.6
LMNA-213ENST00000473598 SBF2Q86WG5 1849 aa18.77■□□□□ 0.6
LMNA-213ENST00000473598 C5P01031 1676 aa18.77■□□□□ 0.6
LMNA-213ENST00000473598 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.6
LMNA-213ENST00000473598 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
LMNA-213ENST00000473598 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.6
LMNA-213ENST00000473598 GIGYF1O75420 1035 aaPredicted RBP18.76■□□□□ 0.59
LMNA-213ENST00000473598 RLBP1P12271 317 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 SOCS7O14512 581 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
LMNA-213ENST00000473598 TTC5Q8N0Z6 440 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 CHMP4AQ9BY43 222 aa18.76■□□□□ 0.59
LMNA-213ENST00000473598 ZBTB47Q9UFB7 747 aaPredicted RBP18.76■□□□□ 0.59
LMNA-213ENST00000473598 BCL9O00512 1426 aa18.75■□□□□ 0.59
LMNA-213ENST00000473598 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
LMNA-213ENST00000473598 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
LMNA-213ENST00000473598 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
LMNA-213ENST00000473598 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
LMNA-213ENST00000473598 NECTIN2Q92692 538 aa18.73■□□□□ 0.59
LMNA-213ENST00000473598 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
LMNA-213ENST00000473598 LAMB4A4D0S4 1761 aa18.73■□□□□ 0.59
LMNA-213ENST00000473598 TNS1Q9HBL0 1735 aaKnown RBP18.73■□□□□ 0.59
LMNA-213ENST00000473598 EIF2S2P20042 333 aaKnown RBP18.73■□□□□ 0.59
LMNA-213ENST00000473598 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
LMNA-213ENST00000473598 FMNL2Q96PY5 1086 aa18.73■□□□□ 0.59
LMNA-213ENST00000473598 PTPRCP08575 1304 aa18.72■□□□□ 0.59
LMNA-213ENST00000473598 KCPQ6ZWJ8 1503 aa18.72■□□□□ 0.59
LMNA-213ENST00000473598 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
LMNA-213ENST00000473598 PRAMEF22A3QJZ6 481 aa18.71■□□□□ 0.59
LMNA-213ENST00000473598 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
LMNA-213ENST00000473598 NHSQ6T4R5 1651 aa18.71■□□□□ 0.59
LMNA-213ENST00000473598 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
LMNA-213ENST00000473598 PIGBQ92521 554 aa18.71■□□□□ 0.59
LMNA-213ENST00000473598 G2E3Q7L622 706 aa18.7■□□□□ 0.58
LMNA-213ENST00000473598 ABCC4O15439 1325 aa18.7■□□□□ 0.58
LMNA-213ENST00000473598 SNRPA1P09661 255 aaKnown RBP18.69■□□□□ 0.58
LMNA-213ENST00000473598 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
LMNA-213ENST00000473598 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
LMNA-213ENST00000473598 APBA3O96018 575 aa18.69■□□□□ 0.58
LMNA-213ENST00000473598 CHPF2Q9P2E5 772 aa18.69■□□□□ 0.58
LMNA-213ENST00000473598 FLIIQ13045 1269 aa18.67■□□□□ 0.58
LMNA-213ENST00000473598 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
LMNA-213ENST00000473598 DBF4Q9UBU7 674 aaPredicted RBP18.67■□□□□ 0.58
LMNA-213ENST00000473598 BTAF1O14981 1849 aa18.67■□□□□ 0.58
LMNA-213ENST00000473598 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
LMNA-213ENST00000473598 AAMPQ13685 434 aa18.67■□□□□ 0.58
LMNA-213ENST00000473598 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
LMNA-213ENST00000473598 DDX19BQ9UMR2 479 aa18.67■□□□□ 0.58
LMNA-213ENST00000473598 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
LMNA-213ENST00000473598 N4BP2Q86UW6 1770 aaPredicted RBP18.66■□□□□ 0.58
LMNA-213ENST00000473598 CCDC125Q86Z20 511 aa18.66■□□□□ 0.58
LMNA-213ENST00000473598 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
LMNA-213ENST00000473598 PODXL2Q9NZ53 605 aa18.66■□□□□ 0.58
LMNA-213ENST00000473598 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
LMNA-213ENST00000473598 PHAXQ9H814 394 aaKnown RBP18.65■□□□□ 0.58
LMNA-213ENST00000473598 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.58
LMNA-213ENST00000473598 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.58
LMNA-213ENST00000473598 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
LMNA-213ENST00000473598 PDIA6Q15084 440 aa18.63■□□□□ 0.57
LMNA-213ENST00000473598 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
LMNA-213ENST00000473598 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
LMNA-213ENST00000473598 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
LMNA-213ENST00000473598 ANXA1P04083 346 aa18.62■□□□□ 0.57
LMNA-213ENST00000473598 BAG6P46379 1132 aa18.62■□□□□ 0.57
LMNA-213ENST00000473598 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
LMNA-213ENST00000473598 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
LMNA-213ENST00000473598 F6X3S4 739 aa18.61■□□□□ 0.57
LMNA-213ENST00000473598 CAMKK2Q96RR4 588 aa18.61■□□□□ 0.57
LMNA-213ENST00000473598 PXDNLA1KZ92 1463 aa18.6■□□□□ 0.57
LMNA-213ENST00000473598 ZBTB7BO15156 539 aaPredicted RBP18.6■□□□□ 0.57
LMNA-213ENST00000473598 PROM2Q8N271 834 aa18.6■□□□□ 0.57
LMNA-213ENST00000473598 CHMP4BQ9H444 224 aaKnown RBP18.6■□□□□ 0.57
LMNA-213ENST00000473598 ERBB4Q15303 1308 aa18.59■□□□□ 0.57
LMNA-213ENST00000473598 PLSCR1O15162 318 aa18.59■□□□□ 0.57
LMNA-213ENST00000473598 KCNQ4P56696 695 aa18.59■□□□□ 0.57
LMNA-213ENST00000473598 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
LMNA-213ENST00000473598 ZBTB40Q9NUA8 1239 aa18.59■□□□□ 0.57
LMNA-213ENST00000473598 TJP1Q07157 1748 aa18.59■□□□□ 0.57
LMNA-213ENST00000473598 TEX13AQ9BXU3 409 aaPredicted RBP18.59■□□□□ 0.57
LMNA-213ENST00000473598 CCT4P50991 539 aaKnown RBP18.58■□□□□ 0.56
LMNA-213ENST00000473598 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
LMNA-213ENST00000473598 MYL6BP14649 208 aa18.57■□□□□ 0.56
LMNA-213ENST00000473598 LRP10Q7Z4F1 713 aa18.57■□□□□ 0.56
LMNA-213ENST00000473598 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
LMNA-213ENST00000473598 CICQ96RK0 1608 aaPredicted RBP18.57■□□□□ 0.56
LMNA-213ENST00000473598 FAM43AQ8N2R8 423 aa18.57■□□□□ 0.56
LMNA-213ENST00000473598 PI4KAP2A4QPH2 592 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 TXNRD1Q16881 649 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 PI4KAP1Q8N8J0 262 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 SLC4A9Q96Q91 983 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 BRPF3Q9ULD4 1205 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms