RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
SATB2-208ENST00000473517 ITGB4P16144 1822 aa11.67□□□□□ -0.54
SATB2-208ENST00000473517 EAPPQ56P03 285 aaPredicted RBP11.67□□□□□ -0.54
SATB2-208ENST00000473517 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
SATB2-208ENST00000473517 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
SATB2-208ENST00000473517 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
SATB2-208ENST00000473517 SPG7Q9UQ90 795 aa11.67□□□□□ -0.54
SATB2-208ENST00000473517 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
SATB2-208ENST00000473517 H0YIN7 160 aa11.66□□□□□ -0.54
SATB2-208ENST00000473517 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
SATB2-208ENST00000473517 PNMA8AQ86V59 439 aaPredicted RBP11.66□□□□□ -0.54
SATB2-208ENST00000473517 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
SATB2-208ENST00000473517 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
SATB2-208ENST00000473517 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
SATB2-208ENST00000473517 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
SATB2-208ENST00000473517 RGPD2P0DJD1 1756 aa11.65□□□□□ -0.54
SATB2-208ENST00000473517 HABP4Q5JVS0 413 aaKnown RBP11.65□□□□□ -0.54
SATB2-208ENST00000473517 MAP1SQ66K74 1059 aaPredicted RBP11.65□□□□□ -0.54
SATB2-208ENST00000473517 CYP4F22Q6NT55 531 aa11.65□□□□□ -0.54
SATB2-208ENST00000473517 TAOK3Q9H2K8 898 aa11.65□□□□□ -0.54
SATB2-208ENST00000473517 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
SATB2-208ENST00000473517 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
SATB2-208ENST00000473517 GRM1Q13255 1194 aa11.64□□□□□ -0.55
SATB2-208ENST00000473517 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
SATB2-208ENST00000473517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
SATB2-208ENST00000473517 C21orf2O43822 256 aa11.63□□□□□ -0.55
SATB2-208ENST00000473517 EPHX2P34913 555 aa11.63□□□□□ -0.55
SATB2-208ENST00000473517 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
SATB2-208ENST00000473517 IFNL2Q8IZJ0 200 aa11.63□□□□□ -0.55
SATB2-208ENST00000473517 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
SATB2-208ENST00000473517 AOC2O75106 756 aa11.62□□□□□ -0.55
SATB2-208ENST00000473517 ZPR1O75312 459 aa11.62□□□□□ -0.55
SATB2-208ENST00000473517 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
SATB2-208ENST00000473517 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
SATB2-208ENST00000473517 HSP90AB2PQ58FF8 381 aa11.62□□□□□ -0.55
SATB2-208ENST00000473517 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
SATB2-208ENST00000473517 INSRP06213 1382 aa11.62□□□□□ -0.55
SATB2-208ENST00000473517 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 SCN4AP35499 1836 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 SERPINB2P05120 415 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 PHKG2P15735 406 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 NFIXQ14938 502 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 TLL2Q9Y6L7 1015 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
SATB2-208ENST00000473517 ZNF831Q5JPB2 1677 aa11.6□□□□□ -0.55
SATB2-208ENST00000473517 ERVV-2B6SEH9 535 aa11.6□□□□□ -0.55
SATB2-208ENST00000473517 USPL1Q5W0Q7 1092 aa11.6□□□□□ -0.55
SATB2-208ENST00000473517 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.555e-6■■■■□ 22.9
SATB2-208ENST00000473517 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
SATB2-208ENST00000473517 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
SATB2-208ENST00000473517 DLL1O00548 723 aa11.59□□□□□ -0.55
SATB2-208ENST00000473517 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
SATB2-208ENST00000473517 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.55
SATB2-208ENST00000473517 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
SATB2-208ENST00000473517 CST9Q5W186 159 aa11.58□□□□□ -0.56
SATB2-208ENST00000473517 HHIPL1Q96JK4 782 aa11.58□□□□□ -0.56
SATB2-208ENST00000473517 ADAMTSL1Q8N6G6 1762 aa11.58□□□□□ -0.56
SATB2-208ENST00000473517 PDE6BP35913 854 aa11.57□□□□□ -0.56
SATB2-208ENST00000473517 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
SATB2-208ENST00000473517 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
SATB2-208ENST00000473517 FLT4P35916 1363 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 TONSLQ96HA7 1378 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 MYH14Q7Z406 1995 aaKnown RBP11.56□□□□□ -0.56
SATB2-208ENST00000473517 COL5A3P25940 1745 aaPredicted RBP11.56□□□□□ -0.56
SATB2-208ENST00000473517 FXR1P51114 621 aaKnown RBP eCLIP11.56□□□□□ -0.56
SATB2-208ENST00000473517 CIAPIN1Q6FI81 312 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
SATB2-208ENST00000473517 SAPCD2Q86UD0 394 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 CNKSR1Q969H4 720 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 BRIP1Q9BX63 1249 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 RNF123Q5XPI4 1314 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 ZNF541Q9H0D2 1346 aa11.56□□□□□ -0.56
SATB2-208ENST00000473517 NCAPD2Q15021 1401 aa11.55□□□□□ -0.56
SATB2-208ENST00000473517 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
SATB2-208ENST00000473517 FMR1Q06787 632 aaKnown RBP eCLIP11.55□□□□□ -0.56
SATB2-208ENST00000473517 FER1L6Q2WGJ9 1857 aa11.55□□□□□ -0.56
SATB2-208ENST00000473517 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
SATB2-208ENST00000473517 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
SATB2-208ENST00000473517 GPC2Q8N158 579 aa11.54□□□□□ -0.56
SATB2-208ENST00000473517 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
SATB2-208ENST00000473517 NRXN2Q9P2S2 1712 aa11.53□□□□□ -0.56
SATB2-208ENST00000473517 CABP4P57796 275 aa11.53□□□□□ -0.56
SATB2-208ENST00000473517 NOGQ13253 232 aa11.53□□□□□ -0.56
SATB2-208ENST00000473517 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
SATB2-208ENST00000473517 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
SATB2-208ENST00000473517 FZD9O00144 591 aa11.52□□□□□ -0.57
SATB2-208ENST00000473517 FYB1O15117 783 aa11.52□□□□□ -0.57
SATB2-208ENST00000473517 STYK1Q6J9G0 422 aa11.52□□□□□ -0.57
SATB2-208ENST00000473517 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
SATB2-208ENST00000473517 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
SATB2-208ENST00000473517 TRAF5O00463 557 aa11.51□□□□□ -0.57
SATB2-208ENST00000473517 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
SATB2-208ENST00000473517 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
SATB2-208ENST00000473517 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
SATB2-208ENST00000473517 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
SATB2-208ENST00000473517 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
SATB2-208ENST00000473517 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
SATB2-208ENST00000473517 AKAP4Q5JQC9 854 aa11.5□□□□□ -0.57
SATB2-208ENST00000473517 USP50Q70EL3 339 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms