RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
RCL1-209ENST00000473230 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 KCNH5Q8NCM2 988 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 TOPAZ1Q8N9V7 1692 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 USP19O94966 1318 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 SPATA31A5Q5VU36 1347 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 SPATA31A7Q8IWB4 1347 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 TTC21AQ8NDW8 1320 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 NWD2Q9ULI1 1742 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 CPDO75976 1380 aa9.47□□□□□ -0.89
RCL1-209ENST00000473230 COL14A1Q05707 1796 aaKnown RBP9.47□□□□□ -0.89
RCL1-209ENST00000473230 RALBP1Q15311 655 aa9.46□□□□□ -0.9
RCL1-209ENST00000473230 CHRNA2Q15822 529 aa9.46□□□□□ -0.9
RCL1-209ENST00000473230 HDGFL2Q7Z4V5 671 aaPredicted RBP9.46□□□□□ -0.9
RCL1-209ENST00000473230 TMC1Q8TDI8 760 aa9.46□□□□□ -0.9
RCL1-209ENST00000473230 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
RCL1-209ENST00000473230 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.9
RCL1-209ENST00000473230 TERF2IPQ9NYB0 399 aa9.46□□□□□ -0.9
RCL1-209ENST00000473230 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.9
RCL1-209ENST00000473230 GLI3P10071 1580 aa9.46□□□□□ -0.9
RCL1-209ENST00000473230 ABCA3Q99758 1704 aa9.45□□□□□ -0.9
RCL1-209ENST00000473230 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
RCL1-209ENST00000473230 SPATA31A1Q5TZJ5 1347 aa9.45□□□□□ -0.9
RCL1-209ENST00000473230 TTC21BQ7Z4L5 1316 aa9.45□□□□□ -0.9
RCL1-209ENST00000473230 MYBBP1AQ9BQG0 1328 aaKnown RBP9.45□□□□□ -0.9
RCL1-209ENST00000473230 PLCH1Q4KWH8 1693 aa9.45□□□□□ -0.9
RCL1-209ENST00000473230 ZBTB7CA1YPR0 619 aa9.44□□□□□ -0.9
RCL1-209ENST00000473230 SLC19A1P41440 591 aa9.44□□□□□ -0.9
RCL1-209ENST00000473230 TMF1P82094 1093 aa9.44□□□□□ -0.9
RCL1-209ENST00000473230 USP35Q9P2H5 1018 aa9.44□□□□□ -0.9
RCL1-209ENST00000473230 THRAP3Q9Y2W1 955 aaKnown RBP9.44□□□□□ -0.9
RCL1-209ENST00000473230 NINLQ9Y2I6 1382 aa9.44□□□□□ -0.9
RCL1-209ENST00000473230 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
RCL1-209ENST00000473230 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
RCL1-209ENST00000473230 CDCA8Q53HL2 280 aa9.43□□□□□ -0.9
RCL1-209ENST00000473230 BARGINQ6ZT62 677 aa9.43□□□□□ -0.9
RCL1-209ENST00000473230 TCP11L2Q8N4U5 519 aa9.43□□□□□ -0.9
RCL1-209ENST00000473230 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
RCL1-209ENST00000473230 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 POTECB2RU33 542 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 ZPR1O75312 459 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 BAG6P46379 1132 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 TRIM67Q6ZTA4 783 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 TESK2Q96S53 571 aa9.42□□□□□ -0.9
RCL1-209ENST00000473230 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
RCL1-209ENST00000473230 PARD3Q8TEW0 1356 aa9.41□□□□□ -0.9
RCL1-209ENST00000473230 DGAT1O75907 488 aa9.41□□□□□ -0.9
RCL1-209ENST00000473230 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
RCL1-209ENST00000473230 SWT1Q5T5J6 900 aaKnown RBP9.41□□□□□ -0.9
RCL1-209ENST00000473230 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
RCL1-209ENST00000473230 TOM1L2Q6ZVM7 507 aa9.41□□□□□ -0.9
RCL1-209ENST00000473230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
RCL1-209ENST00000473230 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
RCL1-209ENST00000473230 PHRF1Q9P1Y6 1649 aaKnown RBP9.41□□□□□ -0.9
RCL1-209ENST00000473230 SMG6Q86US8 1419 aaKnown RBP9.4□□□□□ -0.9
RCL1-209ENST00000473230 NRAPQ86VF7 1730 aa9.4□□□□□ -0.9
RCL1-209ENST00000473230 SEMA3EO15041 775 aa9.4□□□□□ -0.9
RCL1-209ENST00000473230 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
RCL1-209ENST00000473230 ERICH6BQ5W0A0 696 aa9.4□□□□□ -0.9
RCL1-209ENST00000473230 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
RCL1-209ENST00000473230 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.9
RCL1-209ENST00000473230 SLIT3O75094 1523 aa9.4□□□□□ -0.91
RCL1-209ENST00000473230 CRB1P82279 1406 aa9.39□□□□□ -0.91
RCL1-209ENST00000473230 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
RCL1-209ENST00000473230 CRYBG1Q9Y4K1 1723 aa9.39□□□□□ -0.91
RCL1-209ENST00000473230 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
RCL1-209ENST00000473230 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
RCL1-209ENST00000473230 PRIM1P49642 420 aaKnown RBP9.39□□□□□ -0.91
RCL1-209ENST00000473230 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
RCL1-209ENST00000473230 PNISRQ8TF01 805 aaKnown RBP9.39□□□□□ -0.91
RCL1-209ENST00000473230 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
RCL1-209ENST00000473230 CAMTA1Q9Y6Y1 1673 aa9.39□□□□□ -0.91
RCL1-209ENST00000473230 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
RCL1-209ENST00000473230 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
RCL1-209ENST00000473230 IRX6P78412 446 aaPredicted RBP9.38□□□□□ -0.91
RCL1-209ENST00000473230 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
RCL1-209ENST00000473230 A0A1W2PP64 1363 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 MYOM1P52179 1685 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 FAM187AA6NFU0 413 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 DDB1Q16531 1140 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 SPRYD7Q5W111 196 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 DEFB132Q7Z7B7 95 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 NME9Q86XW9 330 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 COG3Q96JB2 828 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 PANK3Q9H999 370 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
RCL1-209ENST00000473230 OSBPP22059 807 aa9.36□□□□□ -0.91
RCL1-209ENST00000473230 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
RCL1-209ENST00000473230 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
RCL1-209ENST00000473230 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
RCL1-209ENST00000473230 ABCC6O95255 1503 aa9.36□□□□□ -0.91
RCL1-209ENST00000473230 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
RCL1-209ENST00000473230 THSD7AQ9UPZ6 1657 aa9.36□□□□□ -0.91
RCL1-209ENST00000473230 CD163L1Q9NR16 1453 aa9.35□□□□□ -0.91
RCL1-209ENST00000473230 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
RCL1-209ENST00000473230 TRIM37O94972 964 aa9.35□□□□□ -0.91
RCL1-209ENST00000473230 CC2D1BQ5T0F9 858 aaKnown RBP9.35□□□□□ -0.91
RCL1-209ENST00000473230 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms