RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 APBB1IPQ7Z5R6 666 aaPredicted RBP8.07□□□□□ -1.12
RTF1-203ENST00000473214 SBNO2Q9Y2G9 1366 aa8.07□□□□□ -1.12
RTF1-203ENST00000473214 hCG_2014768A0A024R1R8 64 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 ATG7O95352 703 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 ERCC5P28715 1186 aaPredicted RBP8.06□□□□□ -1.12
RTF1-203ENST00000473214 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
RTF1-203ENST00000473214 IGBP1P78318 339 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 CTDSPL2Q05D32 466 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 RALBP1Q15311 655 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 ADAMTS19Q8TE59 1207 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 VTI1AQ96AJ9 217 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 GPATCH3Q96I76 525 aa8.06□□□□□ -1.12
RTF1-203ENST00000473214 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
RTF1-203ENST00000473214 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
RTF1-203ENST00000473214 SLC35F4A4IF30 521 aa8.05□□□□□ -1.12
RTF1-203ENST00000473214 MAP4K4O95819 1239 aaPredicted RBP8.05□□□□□ -1.12
RTF1-203ENST00000473214 MARSP56192 900 aaKnown RBP8.05□□□□□ -1.12
RTF1-203ENST00000473214 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
RTF1-203ENST00000473214 KCTD15Q96SI1 283 aaPredicted RBP8.05□□□□□ -1.12
RTF1-203ENST00000473214 ARHGAP9Q9BRR9 750 aa8.05□□□□□ -1.12
RTF1-203ENST00000473214 CDV3Q9UKY7 258 aaKnown RBP8.05□□□□□ -1.12
RTF1-203ENST00000473214 RECKO95980 971 aa8.04□□□□□ -1.12
RTF1-203ENST00000473214 ITGA6P23229 1130 aa8.04□□□□□ -1.12
RTF1-203ENST00000473214 KANK3Q6NY19 840 aa8.04□□□□□ -1.12
RTF1-203ENST00000473214 LNPKQ9C0E8 428 aa8.04□□□□□ -1.12
RTF1-203ENST00000473214 MAGEC2Q9UBF1 373 aaPredicted RBP8.04□□□□□ -1.12
RTF1-203ENST00000473214 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
RTF1-203ENST00000473214 TLDC2A0PJX2 215 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
RTF1-203ENST00000473214 FOXK2Q01167 660 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 DHX9Q08211 1270 aaKnown RBP8.03□□□□□ -1.12
RTF1-203ENST00000473214 NPAS4Q8IUM7 802 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 LARGE2Q8N3Y3 721 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 TERF2IPQ9NYB0 399 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 CHD1O14646 1710 aa8.03□□□□□ -1.12
RTF1-203ENST00000473214 ANKRD33BA6NCL7 494 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 PTPROQ16827 1216 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 TSNAXIP1Q2TAA8 658 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
RTF1-203ENST00000473214 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
RTF1-203ENST00000473214 SV2AQ7L0J3 742 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 TMTC2Q8N394 836 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 WIZO95785 1651 aa8.02□□□□□ -1.13
RTF1-203ENST00000473214 CDC14CA4D256 554 aa8.01□□□□□ -1.13
RTF1-203ENST00000473214 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
RTF1-203ENST00000473214 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
RTF1-203ENST00000473214 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
RTF1-203ENST00000473214 SCARF2Q96GP6 870 aaPredicted RBP8.01□□□□□ -1.13
RTF1-203ENST00000473214 SGSM3Q96HU1 749 aa8.01□□□□□ -1.13
RTF1-203ENST00000473214 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
RTF1-203ENST00000473214 TANGO6Q9C0B7 1094 aa8.01□□□□□ -1.13
RTF1-203ENST00000473214 PARNO95453 639 aaKnown RBP8□□□□□ -1.13
RTF1-203ENST00000473214 IBSPP21815 317 aaPredicted RBP8□□□□□ -1.13
RTF1-203ENST00000473214 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
RTF1-203ENST00000473214 SDE2Q6IQ49 451 aa8□□□□□ -1.13
RTF1-203ENST00000473214 ZBTB33Q86T24 672 aa8□□□□□ -1.13
RTF1-203ENST00000473214 INSM2Q96T92 566 aaPredicted RBP8□□□□□ -1.13
RTF1-203ENST00000473214 UBA5Q9GZZ9 404 aa8□□□□□ -1.13
RTF1-203ENST00000473214 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
RTF1-203ENST00000473214 EIF4G3O43432 1585 aaKnown RBP8□□□□□ -1.13
RTF1-203ENST00000473214 SOWAHDA6NJG2 315 aa7.99□□□□□ -1.13
RTF1-203ENST00000473214 FBXO31Q5XUX0 539 aaPredicted RBP7.99□□□□□ -1.13
RTF1-203ENST00000473214 LYPD4Q6UWN0 246 aa7.99□□□□□ -1.13
RTF1-203ENST00000473214 SMC5Q8IY18 1101 aa7.99□□□□□ -1.13
RTF1-203ENST00000473214 GPSM3Q9Y4H4 160 aa7.99□□□□□ -1.13
RTF1-203ENST00000473214 SENP3-EIF4A1A0A087X0R7 540 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 CCDC194A0A1B0GVG4 234 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 ADAMTS2O95450 1211 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 RELBQ01201 579 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 NR6A1Q15406 480 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 XP32Q5T750 250 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 RNF217Q8TC41 542 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 KCNB2Q92953 911 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 SPACA7Q96KW9 195 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 TFIP11Q9UBB9 837 aaKnown RBP7.98□□□□□ -1.13
RTF1-203ENST00000473214 BIN2Q9UBW5 565 aaPredicted RBP7.98□□□□□ -1.13
RTF1-203ENST00000473214 CFTRP13569 1480 aa7.98□□□□□ -1.13
RTF1-203ENST00000473214 ARID4AP29374 1257 aaPredicted RBP7.97□□□□□ -1.13
RTF1-203ENST00000473214 PTK2Q05397 1052 aa7.97□□□□□ -1.13
RTF1-203ENST00000473214 PSME1Q06323 249 aa7.97□□□□□ -1.13
RTF1-203ENST00000473214 CCDC144BQ3MJ40 725 aa7.97□□□□□ -1.13
RTF1-203ENST00000473214 CNPY4Q8N129 248 aa7.97□□□□□ -1.13
RTF1-203ENST00000473214 CREB3O43889 395 aa7.96□□□□□ -1.14
RTF1-203ENST00000473214 PPP2R2DQ66LE6 453 aa7.96□□□□□ -1.14
RTF1-203ENST00000473214 FAM9BQ8IZU0 186 aa7.96□□□□□ -1.14
RTF1-203ENST00000473214 ADAM32Q8TC27 787 aa7.96□□□□□ -1.14
RTF1-203ENST00000473214 DHX38Q92620 1227 aaKnown RBP7.96□□□□□ -1.14
RTF1-203ENST00000473214 ZNF395Q9H8N7 513 aaPredicted RBP7.96□□□□□ -1.14
RTF1-203ENST00000473214 POLMQ9NP87 494 aaPredicted RBP7.96□□□□□ -1.14
RTF1-203ENST00000473214 SOCS7O14512 581 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 EIF3JO75822 258 aaKnown RBP7.95□□□□□ -1.14
RTF1-203ENST00000473214 TAGLNQ01995 201 aaKnown RBP7.95□□□□□ -1.14
RTF1-203ENST00000473214 SRSF11Q05519 484 aaKnown RBP7.95□□□□□ -1.14
RTF1-203ENST00000473214 WASHC4Q2M389 1173 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 C9orf131Q5VYM1 1079 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 PHLDB3Q6NSJ2 640 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms