RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 TK2O00142 265 aa11.16□□□□□ -0.62
LSAMP-202ENST00000473171 NBR1Q14596 966 aa11.16□□□□□ -0.62
LSAMP-202ENST00000473171 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
LSAMP-202ENST00000473171 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
LSAMP-202ENST00000473171 NFAT5O94916 1531 aa11.15□□□□□ -0.62
LSAMP-202ENST00000473171 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
LSAMP-202ENST00000473171 DDX54Q8TDD1 881 aaKnown RBP11.15□□□□□ -0.62
LSAMP-202ENST00000473171 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
LSAMP-202ENST00000473171 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
LSAMP-202ENST00000473171 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
LSAMP-202ENST00000473171 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
LSAMP-202ENST00000473171 SYTL4Q96C24 671 aaPredicted RBP11.15□□□□□ -0.62
LSAMP-202ENST00000473171 EVC2Q86UK5 1308 aa11.14□□□□□ -0.63
LSAMP-202ENST00000473171 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
LSAMP-202ENST00000473171 MSL1Q68DK7 614 aa11.14□□□□□ -0.63
LSAMP-202ENST00000473171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.14□□□□□ -0.63
LSAMP-202ENST00000473171 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
LSAMP-202ENST00000473171 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
LSAMP-202ENST00000473171 CHD4Q14839 1912 aa11.13□□□□□ -0.63
LSAMP-202ENST00000473171 GRIN3BO60391 1043 aa11.13□□□□□ -0.63
LSAMP-202ENST00000473171 SLC27A3Q5K4L6 730 aa11.13□□□□□ -0.63
LSAMP-202ENST00000473171 ANKRD24Q8TF21 1146 aa11.13□□□□□ -0.63
LSAMP-202ENST00000473171 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
LSAMP-202ENST00000473171 KTN1Q86UP2 1357 aaKnown RBP11.13□□□□□ -0.63
LSAMP-202ENST00000473171 NME9Q86XW9 330 aa11.12□□□□□ -0.63
LSAMP-202ENST00000473171 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
LSAMP-202ENST00000473171 MAP3K7O43318 606 aa11.11□□□□□ -0.63
LSAMP-202ENST00000473171 HSPA6P17066 643 aa11.11□□□□□ -0.63
LSAMP-202ENST00000473171 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
LSAMP-202ENST00000473171 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
LSAMP-202ENST00000473171 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
LSAMP-202ENST00000473171 BTAF1O14981 1849 aa11.1□□□□□ -0.63
LSAMP-202ENST00000473171 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
LSAMP-202ENST00000473171 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
LSAMP-202ENST00000473171 COL23A1Q86Y22 540 aaPredicted RBP11.1□□□□□ -0.63
LSAMP-202ENST00000473171 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
LSAMP-202ENST00000473171 VPS9D1Q9Y2B5 631 aa11.1□□□□□ -0.63
LSAMP-202ENST00000473171 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
LSAMP-202ENST00000473171 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
LSAMP-202ENST00000473171 NSD2O96028 1365 aa11.08□□□□□ -0.64
LSAMP-202ENST00000473171 SLC4A5Q9BY07 1137 aa11.08□□□□□ -0.64
LSAMP-202ENST00000473171 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
LSAMP-202ENST00000473171 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
LSAMP-202ENST00000473171 ADCY9O60503 1353 aa11.06□□□□□ -0.64
LSAMP-202ENST00000473171 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
LSAMP-202ENST00000473171 HRO43593 1189 aa11.06□□□□□ -0.64
LSAMP-202ENST00000473171 COL9A1P20849 921 aa11.06□□□□□ -0.64
LSAMP-202ENST00000473171 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
LSAMP-202ENST00000473171 TMC1Q8TDI8 760 aa11.05□□□□□ -0.64
LSAMP-202ENST00000473171 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
LSAMP-202ENST00000473171 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
LSAMP-202ENST00000473171 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
LSAMP-202ENST00000473171 USP47Q96K76 1375 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 GOLGA8CPA6NN73 597 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
LSAMP-202ENST00000473171 PROX2Q3B8N5 592 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 SMIM5Q71RC9 77 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
LSAMP-202ENST00000473171 ZCRB1Q8TBF4 217 aaKnown RBP11.03□□□□□ -0.64
LSAMP-202ENST00000473171 IP6K1Q92551 441 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 MEGF6O75095 1541 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 IGSF1Q8N6C5 1336 aa11.03□□□□□ -0.64
LSAMP-202ENST00000473171 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.64
LSAMP-202ENST00000473171 COL24A1Q17RW2 1714 aa11.02□□□□□ -0.65
LSAMP-202ENST00000473171 QSER1Q2KHR3 1735 aa11.02□□□□□ -0.65
LSAMP-202ENST00000473171 FBLN1P23142 703 aa11.02□□□□□ -0.65
LSAMP-202ENST00000473171 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
LSAMP-202ENST00000473171 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
LSAMP-202ENST00000473171 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.65
LSAMP-202ENST00000473171 OSBPP22059 807 aa11.01□□□□□ -0.65
LSAMP-202ENST00000473171 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
LSAMP-202ENST00000473171 USHBP1Q8N6Y0 703 aa11.01□□□□□ -0.65
LSAMP-202ENST00000473171 DOT1LQ8TEK3 1739 aa11.01□□□□□ -0.65
LSAMP-202ENST00000473171 EDC4Q6P2E9 1401 aaKnown RBP11.01□□□□□ -0.65
LSAMP-202ENST00000473171 HOXC9P31274 260 aa11□□□□□ -0.65
LSAMP-202ENST00000473171 AMPHP49418 695 aa11□□□□□ -0.65
LSAMP-202ENST00000473171 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
LSAMP-202ENST00000473171 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
LSAMP-202ENST00000473171 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
LSAMP-202ENST00000473171 A0A1W2PP64 1363 aa11□□□□□ -0.65
LSAMP-202ENST00000473171 MON2Q7Z3U7 1717 aa10.99□□□□□ -0.65
LSAMP-202ENST00000473171 MLLT3P42568 568 aaPredicted RBP10.99□□□□□ -0.65
LSAMP-202ENST00000473171 APLP1P51693 650 aa10.99□□□□□ -0.65
LSAMP-202ENST00000473171 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
LSAMP-202ENST00000473171 LTN1O94822 1766 aa10.98□□□□□ -0.65
LSAMP-202ENST00000473171 BHMG1C9JSJ3 638 aaPredicted RBP10.98□□□□□ -0.65
LSAMP-202ENST00000473171 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
LSAMP-202ENST00000473171 AK7Q96M32 723 aa10.98□□□□□ -0.65
LSAMP-202ENST00000473171 SIN3AQ96ST3 1273 aa10.98□□□□□ -0.65
LSAMP-202ENST00000473171 HTRA3P83110 453 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 NBPF6Q5VWK0 638 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 MPRIPQ6WCQ1 1025 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 DNAJC5GQ8N7S2 189 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 COG3Q96JB2 828 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 NBPF4Q96M43 638 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 KIAA1468Q9P260 1216 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 USP54Q70EL1 1684 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms