RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
SMC4-214ENST00000472991 KDRP35968 1356 aa12.18□□□□□ -0.46
SMC4-214ENST00000472991 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
SMC4-214ENST00000472991 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
SMC4-214ENST00000472991 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
SMC4-214ENST00000472991 NHSQ6T4R5 1651 aa12.18□□□□□ -0.46
SMC4-214ENST00000472991 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
SMC4-214ENST00000472991 EXOC5O00471 708 aa12.17□□□□□ -0.46
SMC4-214ENST00000472991 HMOX1P09601 288 aa12.17□□□□□ -0.46
SMC4-214ENST00000472991 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
SMC4-214ENST00000472991 FAM182BQ5T319 152 aa12.17□□□□□ -0.46
SMC4-214ENST00000472991 SULT6B1Q6IMI4 303 aa12.17□□□□□ -0.46
SMC4-214ENST00000472991 BTAF1O14981 1849 aa12.16□□□□□ -0.46
SMC4-214ENST00000472991 PBX2P40425 430 aa12.16□□□□□ -0.46
SMC4-214ENST00000472991 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.467e-97■■■■■ 245.7
SMC4-214ENST00000472991 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
SMC4-214ENST00000472991 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
SMC4-214ENST00000472991 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
SMC4-214ENST00000472991 TBC1D12O60347 775 aa12.15□□□□□ -0.46
SMC4-214ENST00000472991 PDE4AP27815 886 aa12.15□□□□□ -0.46
SMC4-214ENST00000472991 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
SMC4-214ENST00000472991 ZCRB1Q8TBF4 217 aaKnown RBP12.15□□□□□ -0.46
SMC4-214ENST00000472991 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
SMC4-214ENST00000472991 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
SMC4-214ENST00000472991 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
SMC4-214ENST00000472991 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
SMC4-214ENST00000472991 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
SMC4-214ENST00000472991 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMC4-214ENST00000472991 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
SMC4-214ENST00000472991 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
SMC4-214ENST00000472991 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
SMC4-214ENST00000472991 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
SMC4-214ENST00000472991 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
SMC4-214ENST00000472991 RGPD3A6NKT7 1758 aaPredicted RBP12.11□□□□□ -0.47
SMC4-214ENST00000472991 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
SMC4-214ENST00000472991 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
SMC4-214ENST00000472991 CYP27B1O15528 508 aa12.11□□□□□ -0.47
SMC4-214ENST00000472991 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
SMC4-214ENST00000472991 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
SMC4-214ENST00000472991 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
SMC4-214ENST00000472991 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
SMC4-214ENST00000472991 BCL9O00512 1426 aa12.11□□□□□ -0.47
SMC4-214ENST00000472991 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
SMC4-214ENST00000472991 PTGER2P43116 358 aa12.1□□□□□ -0.47
SMC4-214ENST00000472991 ZNF530Q6P9A1 599 aaPredicted RBP12.1□□□□□ -0.47
SMC4-214ENST00000472991 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.471e-11■■■■□ 26.2
SMC4-214ENST00000472991 MFSD10Q14728 455 aa12.09□□□□□ -0.47
SMC4-214ENST00000472991 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.475e-20■■■■■ 85.2
SMC4-214ENST00000472991 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
SMC4-214ENST00000472991 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
SMC4-214ENST00000472991 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
SMC4-214ENST00000472991 RREB1Q92766 1687 aa12.09□□□□□ -0.47
SMC4-214ENST00000472991 LY75O60449 1722 aa12.08□□□□□ -0.47
SMC4-214ENST00000472991 FCHSD2O94868 740 aa12.08□□□□□ -0.48
SMC4-214ENST00000472991 TRIM37O94972 964 aa12.08□□□□□ -0.48
SMC4-214ENST00000472991 PHKG2P15735 406 aa12.08□□□□□ -0.48
SMC4-214ENST00000472991 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
SMC4-214ENST00000472991 ACSBG1Q96GR2 724 aa12.08□□□□□ -0.48
SMC4-214ENST00000472991 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
SMC4-214ENST00000472991 SOCS7O14512 581 aa12.07□□□□□ -0.48
SMC4-214ENST00000472991 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
SMC4-214ENST00000472991 MTHFSDQ2M296 383 aaKnown RBP12.07□□□□□ -0.48
SMC4-214ENST00000472991 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
SMC4-214ENST00000472991 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
SMC4-214ENST00000472991 NUP188Q5SRE5 1749 aa12.06□□□□□ -0.48
SMC4-214ENST00000472991 C1orf141Q5JVX7 400 aa12.06□□□□□ -0.48
SMC4-214ENST00000472991 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
SMC4-214ENST00000472991 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
SMC4-214ENST00000472991 PAPPAQ13219 1627 aa12.06□□□□□ -0.48
SMC4-214ENST00000472991 TAF1LQ8IZX4 1826 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 KCNQ2O43526 872 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 NEFMP07197 916 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 ADAMTS8Q9UP79 889 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 MRC1P22897 1456 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
SMC4-214ENST00000472991 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
SMC4-214ENST00000472991 SF3B2Q13435 895 aaKnown RBP12.04□□□□□ -0.48
SMC4-214ENST00000472991 AKAP4Q5JQC9 854 aa12.04□□□□□ -0.48
SMC4-214ENST00000472991 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
SMC4-214ENST00000472991 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
SMC4-214ENST00000472991 UBR2Q8IWV8 1755 aa12.03□□□□□ -0.48
SMC4-214ENST00000472991 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
SMC4-214ENST00000472991 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
SMC4-214ENST00000472991 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
SMC4-214ENST00000472991 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
SMC4-214ENST00000472991 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
SMC4-214ENST00000472991 APBA3O96018 575 aa12.02□□□□□ -0.49
SMC4-214ENST00000472991 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
SMC4-214ENST00000472991 CCDC125Q86Z20 511 aa12.02□□□□□ -0.49
SMC4-214ENST00000472991 PNISRQ8TF01 805 aaKnown RBP12.02□□□□□ -0.49
SMC4-214ENST00000472991 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
SMC4-214ENST00000472991 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.49
SMC4-214ENST00000472991 C5P01031 1676 aa12.01□□□□□ -0.49
SMC4-214ENST00000472991 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
SMC4-214ENST00000472991 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
SMC4-214ENST00000472991 RNMTO43148 476 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms