RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 FKBP8Q14318 412 aa25.65■■□□□ 1.7
COMMD1-208ENST00000472729 SNRPA1P09661 255 aaKnown RBP25.64■■□□□ 1.7
COMMD1-208ENST00000472729 TGFB2P61812 414 aa25.64■■□□□ 1.7
COMMD1-208ENST00000472729 PLEKHF1Q96S99 279 aa25.64■■□□□ 1.7
COMMD1-208ENST00000472729 NARFQ9UHQ1 456 aa25.64■■□□□ 1.7
COMMD1-208ENST00000472729 COL15A1P39059 1388 aa25.64■■□□□ 1.69
COMMD1-208ENST00000472729 COL24A1Q17RW2 1714 aa25.63■■□□□ 1.69
COMMD1-208ENST00000472729 KCNQ3O43525 872 aa25.62■■□□□ 1.69
COMMD1-208ENST00000472729 WWC3Q9ULE0 1092 aa25.62■■□□□ 1.69
COMMD1-208ENST00000472729 ADAMTS7Q9UKP4 1686 aa25.61■■□□□ 1.69
COMMD1-208ENST00000472729 YBX3P16989 372 aaKnown RBP eCLIP25.61■■□□□ 1.69
COMMD1-208ENST00000472729 RIPK4P57078 832 aa25.6■■□□□ 1.69
COMMD1-208ENST00000472729 LMOD3Q0VAK6 560 aa25.6■■□□□ 1.69
COMMD1-208ENST00000472729 COL5A3P25940 1745 aaPredicted RBP25.6■■□□□ 1.69
COMMD1-208ENST00000472729 IL6STP40189 918 aaPredicted RBP25.59■■□□□ 1.69
COMMD1-208ENST00000472729 PRKRIP1Q9H875 184 aaPredicted RBP25.59■■□□□ 1.69
COMMD1-208ENST00000472729 A1BGP04217 495 aa25.58■■□□□ 1.69
COMMD1-208ENST00000472729 EIF5P55010 431 aaKnown RBP25.58■■□□□ 1.69
COMMD1-208ENST00000472729 MIS18AQ9NYP9 233 aa25.58■■□□□ 1.69
COMMD1-208ENST00000472729 TJP1Q07157 1748 aa25.57■■□□□ 1.68
COMMD1-208ENST00000472729 A0A0G2JLW4 131 aa25.56■■□□□ 1.68
COMMD1-208ENST00000472729 TBC1D2BQ9UPU7 963 aa25.56■■□□□ 1.68
COMMD1-208ENST00000472729 USP16Q9Y5T5 823 aa25.56■■□□□ 1.68
COMMD1-208ENST00000472729 NPHP1O15259 732 aa25.55■■□□□ 1.68
COMMD1-208ENST00000472729 TM4SF1P30408 202 aa25.55■■□□□ 1.68
COMMD1-208ENST00000472729 BICDL1Q6ZP65 573 aa25.55■■□□□ 1.68
COMMD1-208ENST00000472729 CICQ96RK0 1608 aaPredicted RBP25.55■■□□□ 1.68
COMMD1-208ENST00000472729 POLRMTO00411 1230 aaKnown RBP25.54■■□□□ 1.68
COMMD1-208ENST00000472729 DDR1Q08345 913 aa25.54■■□□□ 1.68
COMMD1-208ENST00000472729 NFIXQ14938 502 aa25.54■■□□□ 1.68
COMMD1-208ENST00000472729 NEUROD2Q15784 382 aa25.54■■□□□ 1.68
COMMD1-208ENST00000472729 CCDC146Q8IYE0 955 aa25.54■■□□□ 1.68
COMMD1-208ENST00000472729 THUMPD2Q9BTF0 503 aaKnown RBP25.54■■□□□ 1.68
COMMD1-208ENST00000472729 BCS1LQ9Y276 419 aa25.54■■□□□ 1.68
COMMD1-208ENST00000472729 RUNDC1Q96C34 613 aa25.53■■□□□ 1.68
COMMD1-208ENST00000472729 UTRNP46939 3433 aa25.52■■□□□ 1.68
COMMD1-208ENST00000472729 ZNF316A6NFI3 1004 aaPredicted RBP25.52■■□□□ 1.68
COMMD1-208ENST00000472729 DPEP1P16444 411 aa25.52■■□□□ 1.68
COMMD1-208ENST00000472729 TMPOP42166 694 aaKnown RBP25.52■■□□□ 1.68
COMMD1-208ENST00000472729 DZIP3Q86Y13 1208 aaKnown RBP25.52■■□□□ 1.68
COMMD1-208ENST00000472729 MYH14Q7Z406 1995 aaKnown RBP25.51■■□□□ 1.67
COMMD1-208ENST00000472729 SERPINB2P05120 415 aa25.51■■□□□ 1.67
COMMD1-208ENST00000472729 ZNF784Q8NCA9 323 aaPredicted RBP25.51■■□□□ 1.67
COMMD1-208ENST00000472729 PIM2Q9P1W9 311 aa25.51■■□□□ 1.67
COMMD1-208ENST00000472729 TSPYL4Q9UJ04 414 aa25.51■■□□□ 1.67
COMMD1-208ENST00000472729 C10orf71Q711Q0 1435 aa25.51■■□□□ 1.67
COMMD1-208ENST00000472729 PRAMEF22A3QJZ6 481 aa25.5■■□□□ 1.67
COMMD1-208ENST00000472729 ADAMTS8Q9UP79 889 aa25.5■■□□□ 1.67
COMMD1-208ENST00000472729 ZNF652Q9Y2D9 606 aa25.5■■□□□ 1.67
COMMD1-208ENST00000472729 PIP4K2AP48426 406 aaPredicted RBP25.49■■□□□ 1.67
COMMD1-208ENST00000472729 SETDB2Q96T68 719 aa25.49■■□□□ 1.67
COMMD1-208ENST00000472729 RRP7AQ9Y3A4 280 aaKnown RBP25.49■■□□□ 1.67
COMMD1-208ENST00000472729 BCL2L12Q9HB09 334 aa25.48■■□□□ 1.67
COMMD1-208ENST00000472729 PXDNLA1KZ92 1463 aa25.47■■□□□ 1.67
COMMD1-208ENST00000472729 EIF4A1P60842 406 aaKnown RBP25.47■■□□□ 1.67
COMMD1-208ENST00000472729 DALRD3Q5D0E6 543 aaKnown RBP25.47■■□□□ 1.67
COMMD1-208ENST00000472729 UBR2Q8IWV8 1755 aa25.46■■□□□ 1.67
COMMD1-208ENST00000472729 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
COMMD1-208ENST00000472729 TBC1D9BQ66K14 1250 aa25.46■■□□□ 1.67
COMMD1-208ENST00000472729 GIGYF1O75420 1035 aaPredicted RBP25.45■■□□□ 1.66
COMMD1-208ENST00000472729 ARHGAP27Q6ZUM4 889 aa25.45■■□□□ 1.66
COMMD1-208ENST00000472729 BABAM1Q9NWV8 329 aa25.45■■□□□ 1.66
COMMD1-208ENST00000472729 ANP32CO43423 234 aa25.44■■□□□ 1.66
COMMD1-208ENST00000472729 CAMTA2O94983 1202 aa25.44■■□□□ 1.66
COMMD1-208ENST00000472729 LAS1LQ9Y4W2 734 aaKnown RBP25.44■■□□□ 1.66
COMMD1-208ENST00000472729 CHRNA5P30532 468 aa25.43■■□□□ 1.66
COMMD1-208ENST00000472729 CLEC4GQ6UXB4 293 aa25.43■■□□□ 1.66
COMMD1-208ENST00000472729 NGEFQ8N5V2 710 aa25.43■■□□□ 1.66
COMMD1-208ENST00000472729 CARMIL3Q8ND23 1372 aa25.43■■□□□ 1.66
COMMD1-208ENST00000472729 VIRMAQ69YN4 1812 aaKnown RBP25.42■■□□□ 1.66
COMMD1-208ENST00000472729 GOLGB1Q14789 3259 aaKnown RBP25.42■■□□□ 1.66
COMMD1-208ENST00000472729 H0YIN7 160 aa25.42■■□□□ 1.66
COMMD1-208ENST00000472729 SIPA1L3O60292 1781 aaPredicted RBP25.41■■□□□ 1.66
COMMD1-208ENST00000472729 ST5P78524 1137 aa25.41■■□□□ 1.66
COMMD1-208ENST00000472729 KIF6Q6ZMV9 814 aa25.41■■□□□ 1.66
COMMD1-208ENST00000472729 CNBD1Q8NA66 436 aa25.41■■□□□ 1.66
COMMD1-208ENST00000472729 NBPF26B4DH59 902 aa25.4■■□□□ 1.66
COMMD1-208ENST00000472729 PDE6BP35913 854 aa25.4■■□□□ 1.66
COMMD1-208ENST00000472729 NBPF10Q6P3W6 841 aaKnown RBP25.4■■□□□ 1.66
COMMD1-208ENST00000472729 C2CD5Q86YS7 1000 aa25.4■■□□□ 1.66
COMMD1-208ENST00000472729 NBPF15Q8N660 670 aa25.4■■□□□ 1.66
COMMD1-208ENST00000472729 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
COMMD1-208ENST00000472729 MYL6BP14649 208 aa25.39■■□□□ 1.66
COMMD1-208ENST00000472729 KCNA3P22001 575 aa25.39■■□□□ 1.66
COMMD1-208ENST00000472729 NBPF5PQ86XG9 351 aaPredicted RBP25.39■■□□□ 1.66
COMMD1-208ENST00000472729 EIF2S2P20042 333 aaKnown RBP25.38■■□□□ 1.65
COMMD1-208ENST00000472729 BRIP1Q9BX63 1249 aa25.38■■□□□ 1.65
COMMD1-208ENST00000472729 GTF2E1P29083 439 aaPredicted RBP25.37■■□□□ 1.65
COMMD1-208ENST00000472729 CALD1Q05682 793 aaKnown RBP25.37■■□□□ 1.65
COMMD1-208ENST00000472729 NIP7Q9Y221 180 aaKnown RBP eCLIP25.37■■□□□ 1.65
COMMD1-208ENST00000472729 RGL2O15211 777 aa25.36■■□□□ 1.65
COMMD1-208ENST00000472729 TTLL6Q8N841 843 aa25.36■■□□□ 1.65
COMMD1-208ENST00000472729 PRR5LQ6MZQ0 368 aa25.35■■□□□ 1.65
COMMD1-208ENST00000472729 TPTE2Q6XPS3 522 aa25.35■■□□□ 1.65
COMMD1-208ENST00000472729 ZNF622Q969S3 477 aaKnown RBP eCLIP25.35■■□□□ 1.65
COMMD1-208ENST00000472729 ERBB4Q15303 1308 aa25.35■■□□□ 1.65
COMMD1-208ENST00000472729 APAF1O14727 1248 aa25.34■■□□□ 1.65
COMMD1-208ENST00000472729 GPBP1L1Q9HC44 474 aaPredicted RBP25.34■■□□□ 1.65
COMMD1-208ENST00000472729 TRIM35Q9UPQ4 493 aa25.34■■□□□ 1.65
COMMD1-208ENST00000472729 CCDC24Q8N4L8 307 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms