RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
SIK3-208ENST00000472648 ABT1Q9ULW3 272 aaKnown RBP8.34□□□□□ -1.07
SIK3-208ENST00000472648 SLX4Q8IY92 1834 aa8.33□□□□□ -1.08
SIK3-208ENST00000472648 NKX1-1Q15270 411 aaPredicted RBP8.33□□□□□ -1.08
SIK3-208ENST00000472648 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
SIK3-208ENST00000472648 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
SIK3-208ENST00000472648 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
SIK3-208ENST00000472648 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
SIK3-208ENST00000472648 SPG7Q9UQ90 795 aa8.33□□□□□ -1.08
SIK3-208ENST00000472648 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
SIK3-208ENST00000472648 USP42Q9H9J4 1324 aaKnown RBP8.32□□□□□ -1.08
SIK3-208ENST00000472648 POLRMTO00411 1230 aaKnown RBP8.32□□□□□ -1.08
SIK3-208ENST00000472648 DDNO94850 711 aaPredicted RBP8.32□□□□□ -1.08
SIK3-208ENST00000472648 FBLN1P23142 703 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 ECE1P42892 770 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 RRS1Q15050 365 aaKnown RBP8.32□□□□□ -1.08
SIK3-208ENST00000472648 EAPPQ56P03 285 aaPredicted RBP8.32□□□□□ -1.08
SIK3-208ENST00000472648 SLC12A5Q9H2X9 1139 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 TSKSQ9UJT2 592 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 CLEC11AQ9Y240 323 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 SCN11AQ9UI33 1791 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 INSRP06213 1382 aa8.32□□□□□ -1.08
SIK3-208ENST00000472648 ITGBL1O95965 494 aaPredicted RBP8.31□□□□□ -1.08
SIK3-208ENST00000472648 GRM1Q13255 1194 aa8.31□□□□□ -1.08
SIK3-208ENST00000472648 DGKZQ13574 1117 aa8.31□□□□□ -1.08
SIK3-208ENST00000472648 TAF1DQ9H5J8 278 aaPredicted RBP8.31□□□□□ -1.08
SIK3-208ENST00000472648 ZNF219Q9P2Y4 722 aaPredicted RBP8.31□□□□□ -1.08
SIK3-208ENST00000472648 FLT4P35916 1363 aa8.31□□□□□ -1.08
SIK3-208ENST00000472648 H0YIN7 160 aa8.3□□□□□ -1.08
SIK3-208ENST00000472648 C2CD5Q86YS7 1000 aa8.3□□□□□ -1.08
SIK3-208ENST00000472648 CAPNS2Q96L46 248 aa8.3□□□□□ -1.08
SIK3-208ENST00000472648 SLC4A9Q96Q91 983 aa8.3□□□□□ -1.08
SIK3-208ENST00000472648 BCORQ6W2J9 1755 aa8.3□□□□□ -1.08
SIK3-208ENST00000472648 CA12O43570 354 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 ZPR1O75312 459 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 SOX10P56693 466 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
SIK3-208ENST00000472648 TAOK3Q9H2K8 898 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 SCN7AQ01118 1682 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 NCAPD2Q15021 1401 aa8.29□□□□□ -1.08
SIK3-208ENST00000472648 KIF24Q5T7B8 1368 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 C21orf2O43822 256 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 PHKG2P15735 406 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 TM4SF1P30408 202 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 CRKLP46109 303 aaKnown RBP8.28□□□□□ -1.08
SIK3-208ENST00000472648 HSP90AB2PQ58FF8 381 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 CNTROBQ8N137 903 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 GCC1Q96CN9 775 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 L3MBTL3Q96JM7 780 aaPredicted RBP8.28□□□□□ -1.08
SIK3-208ENST00000472648 LTBP3Q9NS15 1303 aa8.28□□□□□ -1.08
SIK3-208ENST00000472648 CARMIL3Q8ND23 1372 aa8.27□□□□□ -1.09
SIK3-208ENST00000472648 MAP1SQ66K74 1059 aaPredicted RBP8.27□□□□□ -1.09
SIK3-208ENST00000472648 CYP4F22Q6NT55 531 aa8.27□□□□□ -1.09
SIK3-208ENST00000472648 PNMA8AQ86V59 439 aaPredicted RBP8.27□□□□□ -1.09
SIK3-208ENST00000472648 ZNF622Q969S3 477 aaKnown RBP eCLIP8.27□□□□□ -1.099e-6■■□□□ 12.8
SIK3-208ENST00000472648 HACL1Q9UJ83 578 aa8.27□□□□□ -1.09
SIK3-208ENST00000472648 EPHX2P34913 555 aa8.26□□□□□ -1.09
SIK3-208ENST00000472648 MAP2K2P36507 400 aa8.26□□□□□ -1.09
SIK3-208ENST00000472648 USPL1Q5W0Q7 1092 aa8.26□□□□□ -1.09
SIK3-208ENST00000472648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.097e-6■■□□□ 12.8
SIK3-208ENST00000472648 TONSLQ96HA7 1378 aa8.25□□□□□ -1.09
SIK3-208ENST00000472648 ERVV-2B6SEH9 535 aa8.25□□□□□ -1.09
SIK3-208ENST00000472648 AOC2O75106 756 aa8.25□□□□□ -1.09
SIK3-208ENST00000472648 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
SIK3-208ENST00000472648 SERPINB2P05120 415 aa8.25□□□□□ -1.09
SIK3-208ENST00000472648 NFIXQ14938 502 aa8.25□□□□□ -1.09
SIK3-208ENST00000472648 DDX21Q9NR30 783 aaKnown RBP eCLIP8.25□□□□□ -1.09
SIK3-208ENST00000472648 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
SIK3-208ENST00000472648 SOGA3Q5TF21 947 aa8.24□□□□□ -1.09
SIK3-208ENST00000472648 NBPF15Q8N660 670 aa8.24□□□□□ -1.09
SIK3-208ENST00000472648 GGNBP2Q9H3C7 697 aa8.24□□□□□ -1.09
SIK3-208ENST00000472648 RNF123Q5XPI4 1314 aa8.24□□□□□ -1.09
SIK3-208ENST00000472648 COL15A1P39059 1388 aa8.23□□□□□ -1.09
SIK3-208ENST00000472648 UBR2Q8IWV8 1755 aa8.23□□□□□ -1.09
SIK3-208ENST00000472648 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
SIK3-208ENST00000472648 PDE6BP35913 854 aa8.23□□□□□ -1.09
SIK3-208ENST00000472648 BRPF1P55201 1214 aaPredicted RBP8.23□□□□□ -1.09
SIK3-208ENST00000472648 CABP4P57796 275 aa8.23□□□□□ -1.09
SIK3-208ENST00000472648 ZNF541Q9H0D2 1346 aa8.23□□□□□ -1.09
SIK3-208ENST00000472648 POLR2AP24928 1970 aaKnown RBP8.22□□□□□ -1.09
SIK3-208ENST00000472648 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
SIK3-208ENST00000472648 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
SIK3-208ENST00000472648 NARFQ9UHQ1 456 aa8.22□□□□□ -1.09
SIK3-208ENST00000472648 TLL2Q9Y6L7 1015 aa8.22□□□□□ -1.09
SIK3-208ENST00000472648 SOS1Q07889 1333 aaPredicted RBP8.22□□□□□ -1.09
SIK3-208ENST00000472648 RBBP6Q7Z6E9 1792 aaKnown RBP8.22□□□□□ -1.09
SIK3-208ENST00000472648 FYB1O15117 783 aa8.21□□□□□ -1.1
SIK3-208ENST00000472648 PPM1GO15355 546 aaPredicted RBP8.21□□□□□ -1.1
SIK3-208ENST00000472648 PRPF40BQ6NWY9 871 aaKnown RBP8.21□□□□□ -1.1
SIK3-208ENST00000472648 INTS5Q6P9B9 1019 aaKnown RBP8.21□□□□□ -1.1
SIK3-208ENST00000472648 CNKSR1Q969H4 720 aa8.21□□□□□ -1.1
SIK3-208ENST00000472648 NPHP1O15259 732 aa8.2□□□□□ -1.1
SIK3-208ENST00000472648 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
SIK3-208ENST00000472648 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.1
SIK3-208ENST00000472648 HABP4Q5JVS0 413 aaKnown RBP8.2□□□□□ -1.1
SIK3-208ENST00000472648 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
SIK3-208ENST00000472648 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
SIK3-208ENST00000472648 EYA1Q99502 592 aa8.2□□□□□ -1.1
SIK3-208ENST00000472648 BRIP1Q9BX63 1249 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms