RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 ERBB4Q15303 1308 aa28.52■■■□□ 2.16
PAXBP1-208ENST00000472588 PRAMEF22A3QJZ6 481 aa28.51■■■□□ 2.15
PAXBP1-208ENST00000472588 STARD3NLO95772 234 aa28.51■■■□□ 2.15
PAXBP1-208ENST00000472588 NECTIN2Q92692 538 aa28.51■■■□□ 2.15
PAXBP1-208ENST00000472588 FRAT1Q92837 279 aaPredicted RBP28.51■■■□□ 2.15
PAXBP1-208ENST00000472588 USP16Q9Y5T5 823 aa28.51■■■□□ 2.15
PAXBP1-208ENST00000472588 LOC102724428A0A0B4J2F2 783 aa28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 TCERG1O14776 1098 aaKnown RBP28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 APBA3O96018 575 aa28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 MS4A1P11836 297 aa28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 SIK1P57059 783 aa28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 ZKSCAN2Q63HK3 967 aa28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 ARHGAP45Q92619 1136 aa28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 CICQ96RK0 1608 aaPredicted RBP28.5■■■□□ 2.15
PAXBP1-208ENST00000472588 PTF1AQ7RTS3 328 aa28.49■■■□□ 2.15
PAXBP1-208ENST00000472588 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
PAXBP1-208ENST00000472588 PTPRCP08575 1304 aa28.47■■■□□ 2.15
PAXBP1-208ENST00000472588 ATP6V1AP38606 617 aa28.47■■■□□ 2.15
PAXBP1-208ENST00000472588 EN1Q05925 392 aaPredicted RBP28.47■■■□□ 2.15
PAXBP1-208ENST00000472588 DDX21Q9NR30 783 aaKnown RBP eCLIP28.47■■■□□ 2.15
PAXBP1-208ENST00000472588 HYPKQ9NX55 129 aa28.47■■■□□ 2.15
PAXBP1-208ENST00000472588 CHPF2Q9P2E5 772 aa28.47■■■□□ 2.15
PAXBP1-208ENST00000472588 HMGB2P26583 209 aaKnown RBP28.46■■■□□ 2.15
PAXBP1-208ENST00000472588 DNAJC10Q8IXB1 793 aa28.45■■■□□ 2.15
PAXBP1-208ENST00000472588 RGPD3A6NKT7 1758 aaPredicted RBP28.45■■■□□ 2.15
PAXBP1-208ENST00000472588 RGPD4Q7Z3J3 1758 aa28.45■■■□□ 2.15
PAXBP1-208ENST00000472588 LY75O60449 1722 aa28.45■■■□□ 2.14
PAXBP1-208ENST00000472588 PLIN1O60240 522 aa28.44■■■□□ 2.14
PAXBP1-208ENST00000472588 TJP1Q07157 1748 aa28.44■■■□□ 2.14
PAXBP1-208ENST00000472588 PDE3AQ14432 1141 aa28.44■■■□□ 2.14
PAXBP1-208ENST00000472588 ATF7IPQ6VMQ6 1270 aa28.44■■■□□ 2.14
PAXBP1-208ENST00000472588 SLC4A9Q96Q91 983 aa28.44■■■□□ 2.14
PAXBP1-208ENST00000472588 API5Q9BZZ5 524 aaKnown RBP28.43■■■□□ 2.14
PAXBP1-208ENST00000472588 RREB1Q92766 1687 aa28.42■■■□□ 2.14
PAXBP1-208ENST00000472588 CYP19A1P11511 503 aaPredicted RBP28.41■■■□□ 2.14
PAXBP1-208ENST00000472588 FLIIQ13045 1269 aa28.41■■■□□ 2.14
PAXBP1-208ENST00000472588 EZH2Q15910 746 aaKnown RBP28.41■■■□□ 2.14
PAXBP1-208ENST00000472588 CAMKK2Q96RR4 588 aa28.41■■■□□ 2.14
PAXBP1-208ENST00000472588 PDIA6Q15084 440 aa28.4■■■□□ 2.14
PAXBP1-208ENST00000472588 FTSJ3Q8IY81 847 aaKnown RBP28.4■■■□□ 2.14
PAXBP1-208ENST00000472588 CCNL1Q9UK58 526 aaPredicted RBP28.39■■■□□ 2.14
PAXBP1-208ENST00000472588 PLSCR1O15162 318 aa28.38■■■□□ 2.13
PAXBP1-208ENST00000472588 TRIM27P14373 513 aa28.38■■■□□ 2.13
PAXBP1-208ENST00000472588 FKBP5Q13451 457 aaPredicted RBP28.38■■■□□ 2.13
PAXBP1-208ENST00000472588 DZIP1LQ8IYY4 767 aaKnown RBP28.38■■■□□ 2.13
PAXBP1-208ENST00000472588 DDX58O95786 925 aaKnown RBP28.37■■■□□ 2.13
PAXBP1-208ENST00000472588 A1BGP04217 495 aa28.37■■■□□ 2.13
PAXBP1-208ENST00000472588 MYL6BP14649 208 aa28.37■■■□□ 2.13
PAXBP1-208ENST00000472588 SLC27A3Q5K4L6 730 aa28.37■■■□□ 2.13
PAXBP1-208ENST00000472588 G2E3Q7L622 706 aa28.37■■■□□ 2.13
PAXBP1-208ENST00000472588 COL5A3P25940 1745 aaPredicted RBP28.37■■■□□ 2.13
PAXBP1-208ENST00000472588 NUP188Q5SRE5 1749 aa28.36■■■□□ 2.13
PAXBP1-208ENST00000472588 PHAXQ9H814 394 aaKnown RBP28.36■■■□□ 2.13
PAXBP1-208ENST00000472588 ITPK1Q13572 414 aa28.35■■■□□ 2.13
PAXBP1-208ENST00000472588 PROSER3Q2NL68 480 aa28.35■■■□□ 2.13
PAXBP1-208ENST00000472588 ANXA1P04083 346 aa28.35■■■□□ 2.13
PAXBP1-208ENST00000472588 NPM2Q86SE8 214 aaKnown RBP28.35■■■□□ 2.13
PAXBP1-208ENST00000472588 NBPF26B4DH59 902 aa28.34■■■□□ 2.13
PAXBP1-208ENST00000472588 NBPF14Q5TI25 921 aa28.34■■■□□ 2.13
PAXBP1-208ENST00000472588 NBPF10Q6P3W6 841 aaKnown RBP28.34■■■□□ 2.13
PAXBP1-208ENST00000472588 NBPF15Q8N660 670 aa28.34■■■□□ 2.13
PAXBP1-208ENST00000472588 CCDC87Q9NVE4 849 aa28.34■■■□□ 2.13
PAXBP1-208ENST00000472588 CLUAP1Q96AJ1 413 aa28.33■■■□□ 2.13
PAXBP1-208ENST00000472588 IL6STP40189 918 aaPredicted RBP28.32■■■□□ 2.12
PAXBP1-208ENST00000472588 CRKLP46109 303 aaKnown RBP28.32■■■□□ 2.12
PAXBP1-208ENST00000472588 ERICH6BQ5W0A0 696 aa28.32■■■□□ 2.12
PAXBP1-208ENST00000472588 LRP10Q7Z4F1 713 aa28.32■■■□□ 2.12
PAXBP1-208ENST00000472588 TAF1LQ8IZX4 1826 aa28.32■■■□□ 2.12
PAXBP1-208ENST00000472588 FKBP8Q14318 412 aa28.31■■■□□ 2.12
PAXBP1-208ENST00000472588 RC3H1Q5TC82 1133 aaKnown RBP28.31■■■□□ 2.12
PAXBP1-208ENST00000472588 C20orf194Q5TEA3 1177 aa28.31■■■□□ 2.12
PAXBP1-208ENST00000472588 COPS6Q7L5N1 327 aa28.31■■■□□ 2.12
PAXBP1-208ENST00000472588 ABCC4O15439 1325 aa28.31■■■□□ 2.12
PAXBP1-208ENST00000472588 CNTNAP4Q9C0A0 1308 aa28.31■■■□□ 2.12
PAXBP1-208ENST00000472588 IRX6P78412 446 aaPredicted RBP28.3■■■□□ 2.12
PAXBP1-208ENST00000472588 AIMP1Q12904 312 aaKnown RBP28.3■■■□□ 2.12
PAXBP1-208ENST00000472588 XAGE3Q8WTP9 111 aa28.3■■■□□ 2.12
PAXBP1-208ENST00000472588 PIP4K2AP48426 406 aaPredicted RBP28.29■■■□□ 2.12
PAXBP1-208ENST00000472588 INTS5Q6P9B9 1019 aaKnown RBP28.29■■■□□ 2.12
PAXBP1-208ENST00000472588 KSR2Q6VAB6 950 aa28.29■■■□□ 2.12
PAXBP1-208ENST00000472588 LINC00116Q8NCU8 138 aa28.29■■■□□ 2.12
PAXBP1-208ENST00000472588 PANK1Q8TE04 598 aa28.29■■■□□ 2.12
PAXBP1-208ENST00000472588 ZBTB1Q9Y2K1 713 aa28.29■■■□□ 2.12
PAXBP1-208ENST00000472588 TXNRD1Q16881 649 aa28.27■■■□□ 2.12
PAXBP1-208ENST00000472588 ANKRD13DQ6ZTN6 518 aa28.27■■■□□ 2.12
PAXBP1-208ENST00000472588 CHMP4BQ9H444 224 aaKnown RBP28.27■■■□□ 2.12
PAXBP1-208ENST00000472588 PXDNLA1KZ92 1463 aa28.27■■■□□ 2.12
PAXBP1-208ENST00000472588 PI4KAP2A4QPH2 592 aa28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 RLBP1P12271 317 aa28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 CCT4P50991 539 aaKnown RBP28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 RIC3Q7Z5B4 369 aa28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 PROM2Q8N271 834 aa28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 PI4KAP1Q8N8J0 262 aa28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 TNNQ9UQP3 1299 aa28.26■■■□□ 2.12
PAXBP1-208ENST00000472588 MYH14Q7Z406 1995 aaKnown RBP28.26■■■□□ 2.11
PAXBP1-208ENST00000472588 MVPQ14764 893 aaKnown RBP28.26■■■□□ 2.11
PAXBP1-208ENST00000472588 INTS3Q68E01 1043 aaKnown RBP28.26■■■□□ 2.11
PAXBP1-208ENST00000472588 DNAAF4Q8WXU2 420 aa28.26■■■□□ 2.11
PAXBP1-208ENST00000472588 COG6Q9Y2V7 657 aa28.26■■■□□ 2.11
PAXBP1-208ENST00000472588 ZNF330Q9Y3S2 320 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms