RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
TSPAN1-205ENST00000472170 MRC1P22897 1456 aa10.99□□□□□ -0.65
TSPAN1-205ENST00000472170 ANP32CO43423 234 aa10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 IL6STP40189 918 aaPredicted RBP10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 PRKRIP1Q9H875 184 aaPredicted RBP10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
TSPAN1-205ENST00000472170 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 AMIGO3Q86WK7 504 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 NLGN2Q8NFZ4 835 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 PLEKHF1Q96S99 279 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 ZNF652Q9Y2D9 606 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 ZBTB1Q9Y2K1 713 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 SOS1Q07889 1333 aaPredicted RBP10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 COL24A1Q17RW2 1714 aa10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 MYH14Q7Z406 1995 aaKnown RBP10.97□□□□□ -0.65
TSPAN1-205ENST00000472170 CHD4Q14839 1912 aa10.96□□□□□ -0.65
TSPAN1-205ENST00000472170 COL15A1P39059 1388 aa10.96□□□□□ -0.65
TSPAN1-205ENST00000472170 BABAM1Q9NWV8 329 aa10.96□□□□□ -0.65
TSPAN1-205ENST00000472170 SRP68Q9UHB9 627 aaKnown RBP10.96□□□□□ -0.65
TSPAN1-205ENST00000472170 TMPOP42166 694 aaKnown RBP10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 CALD1Q05682 793 aaKnown RBP10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 FKBP8Q14318 412 aa10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 SETDB2Q96T68 719 aa10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 PIM2Q9P1W9 311 aa10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 TSPYL4Q9UJ04 414 aa10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
TSPAN1-205ENST00000472170 KCNQ3O43525 872 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 A1BGP04217 495 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 TM4SF1P30408 202 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 C1QTNF8P60827 252 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 BICDL1Q6ZP65 573 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 CHMP4AQ9BY43 222 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 TBC1D2BQ9UPU7 963 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
TSPAN1-205ENST00000472170 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 SERPINB2P05120 415 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 CLEC4GQ6UXB4 293 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 CCDC146Q8IYE0 955 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 CEP350Q5VT06 3117 aa10.93□□□□□ -0.66
TSPAN1-205ENST00000472170 TJP1Q07157 1748 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 CICQ96RK0 1608 aaPredicted RBP10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 H0YIN7 160 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 PDE6BP35913 854 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 ST5P78524 1137 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 NFIXQ14938 502 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 DALRD3Q5D0E6 543 aaKnown RBP10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 KIF6Q6ZMV9 814 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 DLG5Q8TDM6 1919 aa10.92□□□□□ -0.66
TSPAN1-205ENST00000472170 SIPA1L3O60292 1781 aaPredicted RBP10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 UBR2Q8IWV8 1755 aa10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 POLRMTO00411 1230 aaKnown RBP10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 DPEP1P16444 411 aa10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 EIF4A1P60842 406 aaKnown RBP10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 TPTE2Q6XPS3 522 aa10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 ARHGAP27Q6ZUM4 889 aa10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 WWC3Q9ULE0 1092 aa10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
TSPAN1-205ENST00000472170 RGL2O15211 777 aa10.9□□□□□ -0.66
TSPAN1-205ENST00000472170 YBX3P16989 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
TSPAN1-205ENST00000472170 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
TSPAN1-205ENST00000472170 NGEFQ8N5V2 710 aa10.9□□□□□ -0.66
TSPAN1-205ENST00000472170 THUMPD2Q9BTF0 503 aaKnown RBP10.9□□□□□ -0.66
TSPAN1-205ENST00000472170 C4AP0C0L4 1744 aa10.89□□□□□ -0.67
TSPAN1-205ENST00000472170 GOLGB1Q14789 3259 aaKnown RBP10.89□□□□□ -0.67
TSPAN1-205ENST00000472170 DDR1Q08345 913 aa10.89□□□□□ -0.67
TSPAN1-205ENST00000472170 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
TSPAN1-205ENST00000472170 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
TSPAN1-205ENST00000472170 CARMIL3Q8ND23 1372 aa10.89□□□□□ -0.67
TSPAN1-205ENST00000472170 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 ERVV-1B6SEH8 477 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 CAMTA2O94983 1202 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 MYL6BP14649 208 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 IFFO2Q5TF58 517 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 TBC1D9BQ66K14 1250 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 ZNF622Q969S3 477 aaKnown RBP eCLIP10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 BRIP1Q9BX63 1249 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 NYXQ9GZU5 481 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 NIP7Q9Y221 180 aaKnown RBP eCLIP10.88□□□□□ -0.67
TSPAN1-205ENST00000472170 PRAMEF22A3QJZ6 481 aa10.87□□□□□ -0.67
TSPAN1-205ENST00000472170 APAF1O14727 1248 aa10.87□□□□□ -0.67
TSPAN1-205ENST00000472170 PIP4K2AP48426 406 aaPredicted RBP10.87□□□□□ -0.67
TSPAN1-205ENST00000472170 GNAI1P63096 354 aa10.87□□□□□ -0.67
TSPAN1-205ENST00000472170 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms