RNA–Protein interactions for RNA: ENST00000472049.1

CCDC136-208, Transcript of coiled-coil domain containing 136, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC136, Length 253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-208ENST00000472049 NFE2L2Q16236 605 aa31.86■■■□□ 2.69
CCDC136-208ENST00000472049 PELP1Q8IZL8 1130 aaKnown RBP31.86■■■□□ 2.69
CCDC136-208ENST00000472049 COL15A1P39059 1388 aa31.85■■■□□ 2.69
CCDC136-208ENST00000472049 PARP3Q9Y6F1 533 aa31.85■■■□□ 2.69
CCDC136-208ENST00000472049 DCTN1Q14203 1278 aa31.84■■■□□ 2.69
CCDC136-208ENST00000472049 SRP68Q9UHB9 627 aaKnown RBP31.84■■■□□ 2.69
CCDC136-208ENST00000472049 TAF7Q15545 349 aaPredicted RBP31.83■■■□□ 2.69
CCDC136-208ENST00000472049 PRKRIP1Q9H875 184 aaPredicted RBP31.83■■■□□ 2.69
CCDC136-208ENST00000472049 GRIN3BO60391 1043 aa31.82■■■□□ 2.68
CCDC136-208ENST00000472049 NARFQ9UHQ1 456 aa31.82■■■□□ 2.68
CCDC136-208ENST00000472049 UTRNP46939 3433 aa31.81■■■□□ 2.68
CCDC136-208ENST00000472049 CANXP27824 592 aaKnown RBP31.81■■■□□ 2.68
CCDC136-208ENST00000472049 A0A087WZG4 1122 aa31.8■■■□□ 2.68
CCDC136-208ENST00000472049 KCNQ3O43525 872 aa31.8■■■□□ 2.68
CCDC136-208ENST00000472049 FKBP8Q14318 412 aa31.8■■■□□ 2.68
CCDC136-208ENST00000472049 USPL1Q5W0Q7 1092 aa31.79■■■□□ 2.68
CCDC136-208ENST00000472049 PNISRQ8TF01 805 aaKnown RBP31.79■■■□□ 2.68
CCDC136-208ENST00000472049 C10orf71Q711Q0 1435 aa31.78■■■□□ 2.68
CCDC136-208ENST00000472049 EIF5P55010 431 aaKnown RBP31.78■■■□□ 2.68
CCDC136-208ENST00000472049 GOLGB1Q14789 3259 aaKnown RBP31.78■■■□□ 2.68
CCDC136-208ENST00000472049 KDM3BQ7LBC6 1761 aa31.77■■■□□ 2.68
CCDC136-208ENST00000472049 SNRPA1P09661 255 aaKnown RBP31.77■■■□□ 2.68
CCDC136-208ENST00000472049 TGFB2P61812 414 aa31.77■■■□□ 2.68
CCDC136-208ENST00000472049 WDR43Q15061 677 aaKnown RBP eCLIP31.77■■■□□ 2.68
CCDC136-208ENST00000472049 IL6STP40189 918 aaPredicted RBP31.76■■■□□ 2.67
CCDC136-208ENST00000472049 NPM2Q86SE8 214 aaKnown RBP31.76■■■□□ 2.67
CCDC136-208ENST00000472049 YBX3P16989 372 aaKnown RBP eCLIP31.75■■■□□ 2.67
CCDC136-208ENST00000472049 KIAA1551Q9HCM1 1747 aa31.74■■■□□ 2.67
CCDC136-208ENST00000472049 TM4SF1P30408 202 aa31.73■■■□□ 2.67
CCDC136-208ENST00000472049 N4BP2Q86UW6 1770 aaPredicted RBP31.73■■■□□ 2.67
CCDC136-208ENST00000472049 LMOD3Q0VAK6 560 aa31.72■■■□□ 2.67
CCDC136-208ENST00000472049 PXDNLA1KZ92 1463 aa31.72■■■□□ 2.67
CCDC136-208ENST00000472049 LAMB4A4D0S4 1761 aa31.71■■■□□ 2.67
CCDC136-208ENST00000472049 SCN7AQ01118 1682 aa31.71■■■□□ 2.67
CCDC136-208ENST00000472049 RIPK4P57078 832 aa31.71■■■□□ 2.67
CCDC136-208ENST00000472049 DDR1Q08345 913 aa31.71■■■□□ 2.67
CCDC136-208ENST00000472049 A1BGP04217 495 aa31.7■■■□□ 2.67
CCDC136-208ENST00000472049 USP16Q9Y5T5 823 aa31.7■■■□□ 2.67
CCDC136-208ENST00000472049 AFDNP55196 1824 aaKnown RBP31.7■■■□□ 2.66
CCDC136-208ENST00000472049 POLRMTO00411 1230 aaKnown RBP31.69■■■□□ 2.66
CCDC136-208ENST00000472049 TMPOP42166 694 aaKnown RBP31.69■■■□□ 2.66
CCDC136-208ENST00000472049 ZNF330Q9Y3S2 320 aaPredicted RBP31.69■■■□□ 2.66
CCDC136-208ENST00000472049 RUNDC1Q96C34 613 aa31.68■■■□□ 2.66
CCDC136-208ENST00000472049 MIS18AQ9NYP9 233 aa31.68■■■□□ 2.66
CCDC136-208ENST00000472049 NRXN2Q9P2S2 1712 aa31.67■■■□□ 2.66
CCDC136-208ENST00000472049 ZNF316A6NFI3 1004 aaPredicted RBP31.67■■■□□ 2.66
CCDC136-208ENST00000472049 NFIXQ14938 502 aa31.67■■■□□ 2.66
CCDC136-208ENST00000472049 BCL2L12Q9HB09 334 aa31.67■■■□□ 2.66
CCDC136-208ENST00000472049 BRCA1P38398 1863 aaKnown RBP31.67■■■□□ 2.66
CCDC136-208ENST00000472049 THUMPD2Q9BTF0 503 aaKnown RBP31.66■■■□□ 2.66
CCDC136-208ENST00000472049 PRAMEF22A3QJZ6 481 aa31.65■■■□□ 2.66
CCDC136-208ENST00000472049 BCORQ6W2J9 1755 aa31.65■■■□□ 2.66
CCDC136-208ENST00000472049 ADAMTS8Q9UP79 889 aa31.64■■■□□ 2.66
CCDC136-208ENST00000472049 TBC1D2BQ9UPU7 963 aa31.64■■■□□ 2.66
CCDC136-208ENST00000472049 A0A0G2JLW4 131 aa31.63■■■□□ 2.65
CCDC136-208ENST00000472049 CCDC146Q8IYE0 955 aa31.63■■■□□ 2.65
CCDC136-208ENST00000472049 BABAM1Q9NWV8 329 aa31.63■■■□□ 2.65
CCDC136-208ENST00000472049 EIF4A1P60842 406 aaKnown RBP31.62■■■□□ 2.65
CCDC136-208ENST00000472049 DPEP1P16444 411 aa31.61■■■□□ 2.65
CCDC136-208ENST00000472049 DZIP3Q86Y13 1208 aaKnown RBP31.61■■■□□ 2.65
CCDC136-208ENST00000472049 GIGYF1O75420 1035 aaPredicted RBP31.6■■■□□ 2.65
CCDC136-208ENST00000472049 SERPINB2P05120 415 aa31.6■■■□□ 2.65
CCDC136-208ENST00000472049 TSPYL4Q9UJ04 414 aa31.6■■■□□ 2.65
CCDC136-208ENST00000472049 WWC3Q9ULE0 1092 aa31.6■■■□□ 2.65
CCDC136-208ENST00000472049 ARFGEF1Q9Y6D6 1849 aa31.59■■■□□ 2.65
CCDC136-208ENST00000472049 CAMTA2O94983 1202 aa31.58■■■□□ 2.65
CCDC136-208ENST00000472049 ZNF784Q8NCA9 323 aaPredicted RBP31.58■■■□□ 2.65
CCDC136-208ENST00000472049 NEUROD2Q15784 382 aa31.57■■■□□ 2.64
CCDC136-208ENST00000472049 BICDL1Q6ZP65 573 aa31.57■■■□□ 2.64
CCDC136-208ENST00000472049 BCS1LQ9Y276 419 aa31.57■■■□□ 2.64
CCDC136-208ENST00000472049 RRP7AQ9Y3A4 280 aaKnown RBP31.57■■■□□ 2.64
CCDC136-208ENST00000472049 CARMIL3Q8ND23 1372 aa31.56■■■□□ 2.64
CCDC136-208ENST00000472049 RGL2O15211 777 aa31.56■■■□□ 2.64
CCDC136-208ENST00000472049 PIP4K2AP48426 406 aaPredicted RBP31.56■■■□□ 2.64
CCDC136-208ENST00000472049 TBC1D9BQ66K14 1250 aa31.56■■■□□ 2.64
CCDC136-208ENST00000472049 PIM2Q9P1W9 311 aa31.56■■■□□ 2.64
CCDC136-208ENST00000472049 ZNF652Q9Y2D9 606 aa31.56■■■□□ 2.64
CCDC136-208ENST00000472049 NBPF26B4DH59 902 aa31.55■■■□□ 2.64
CCDC136-208ENST00000472049 KCNA3P22001 575 aa31.55■■■□□ 2.64
CCDC136-208ENST00000472049 NBPF10Q6P3W6 841 aaKnown RBP31.55■■■□□ 2.64
CCDC136-208ENST00000472049 CLEC4GQ6UXB4 293 aa31.55■■■□□ 2.64
CCDC136-208ENST00000472049 NBPF15Q8N660 670 aa31.55■■■□□ 2.64
CCDC136-208ENST00000472049 SETDB2Q96T68 719 aa31.54■■■□□ 2.64
CCDC136-208ENST00000472049 DLEC1Q9Y238 1755 aa31.53■■■□□ 2.64
CCDC136-208ENST00000472049 TRIM35Q9UPQ4 493 aa31.51■■■□□ 2.63
CCDC136-208ENST00000472049 ERBB4Q15303 1308 aa31.5■■■□□ 2.63
CCDC136-208ENST00000472049 DALRD3Q5D0E6 543 aaKnown RBP31.5■■■□□ 2.63
CCDC136-208ENST00000472049 CHRNA5P30532 468 aa31.49■■■□□ 2.63
CCDC136-208ENST00000472049 PDZRN3Q9UPQ7 1066 aa31.49■■■□□ 2.63
CCDC136-208ENST00000472049 ANP32CO43423 234 aa31.48■■■□□ 2.63
CCDC136-208ENST00000472049 ANKRD31Q8N7Z5 1873 aa31.47■■■□□ 2.63
CCDC136-208ENST00000472049 NPHP1O15259 732 aa31.46■■■□□ 2.63
CCDC136-208ENST00000472049 H0YIN7 160 aa31.45■■■□□ 2.63
CCDC136-208ENST00000472049 CHL1O00533 1208 aa31.45■■■□□ 2.63
CCDC136-208ENST00000472049 PRR5LQ6MZQ0 368 aa31.45■■■□□ 2.63
CCDC136-208ENST00000472049 CNBD1Q8NA66 436 aa31.45■■■□□ 2.63
CCDC136-208ENST00000472049 BRIP1Q9BX63 1249 aa31.45■■■□□ 2.63
CCDC136-208ENST00000472049 NUP98P52948 1817 aa31.45■■■□□ 2.62
CCDC136-208ENST00000472049 PDE6BP35913 854 aa31.44■■■□□ 2.62
CCDC136-208ENST00000472049 ERVV-1B6SEH8 477 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms