RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 IFT172Q9UG01 1749 aa6.7□□□□□ -1.34
LMNB1-205ENST00000472034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.69□□□□□ -1.34
LMNB1-205ENST00000472034 SMAPO00193 183 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 DNAJB2P25686 324 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 CCDC102AQ96A19 550 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 LRRC4BQ9NT99 713 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 FAM198AQ9UFP1 575 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 TULP4Q9NRJ4 1543 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 PNPLA7Q6ZV29 1317 aa6.69□□□□□ -1.34
LMNB1-205ENST00000472034 CLTCL1P53675 1640 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 FOXN1O15353 648 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 NUTM2GQ5VZR2 741 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 METTL3Q86U44 580 aaKnown RBP6.68□□□□□ -1.34
LMNB1-205ENST00000472034 ANKK1Q8NFD2 765 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 PXYLP1Q8TE99 480 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 NECTIN2Q92692 538 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 ABHD8Q96I13 439 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 EYA1Q99502 592 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 SLC24A3Q9HC58 644 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 TUBGCP6Q96RT7 1819 aa6.68□□□□□ -1.34
LMNB1-205ENST00000472034 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
LMNB1-205ENST00000472034 ZFRQ96KR1 1074 aaKnown RBP6.67□□□□□ -1.34
LMNB1-205ENST00000472034 USP19O94966 1318 aa6.67□□□□□ -1.34
LMNB1-205ENST00000472034 PDE4DIPQ5VU43 2346 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 LMO7Q8WWI1 1683 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 RCCD1A6NED2 376 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 KCNQ4P56696 695 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 DDB1Q16531 1140 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 WNT2BQ93097 391 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 LRCH3Q96II8 777 aa6.66□□□□□ -1.34
LMNB1-205ENST00000472034 ACIN1Q9UKV3 1341 aaKnown RBP6.66□□□□□ -1.34
LMNB1-205ENST00000472034 C11orf95C9JLR9 678 aaPredicted RBP6.65□□□□□ -1.34
LMNB1-205ENST00000472034 CLCN1P35523 988 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 FSTL1Q12841 308 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 SAFB2Q14151 953 aaKnown RBP eCLIP6.65□□□□□ -1.34
LMNB1-205ENST00000472034 SPNS2Q8IVW8 549 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 SLF2Q8IX21 1173 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 SLC16A10Q8TF71 515 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 ACSBG1Q96GR2 724 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 PLSCR2Q9NRY7 297 aa6.65□□□□□ -1.34
LMNB1-205ENST00000472034 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.65□□□□□ -1.34
LMNB1-205ENST00000472034 THRAP3Q9Y2W1 955 aaKnown RBP6.65□□□□□ -1.34
LMNB1-205ENST00000472034 CCDC85CA6NKD9 419 aa6.64□□□□□ -1.35
LMNB1-205ENST00000472034 RNF40O75150 1001 aa6.64□□□□□ -1.35
LMNB1-205ENST00000472034 RGS19P49795 217 aa6.64□□□□□ -1.35
LMNB1-205ENST00000472034 TTLL12Q14166 644 aaPredicted RBP6.64□□□□□ -1.35
LMNB1-205ENST00000472034 SULF1Q8IWU6 871 aa6.64□□□□□ -1.35
LMNB1-205ENST00000472034 NUP155O75694 1391 aa6.64□□□□□ -1.35
LMNB1-205ENST00000472034 COL5A2P05997 1499 aaPredicted RBP6.64□□□□□ -1.35
LMNB1-205ENST00000472034 AKAP12Q02952 1782 aa6.64□□□□□ -1.35
LMNB1-205ENST00000472034 BCL9O00512 1426 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 TRIM66O15016 1216 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 QSER1Q2KHR3 1735 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 GPRASP1Q5JY77 1395 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 SAMD7Q7Z3H4 446 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 C16orf71Q8IYS4 520 aaPredicted RBP6.63□□□□□ -1.35
LMNB1-205ENST00000472034 IGSF1Q8N6C5 1336 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 KCTD12Q96CX2 325 aaKnown RBP6.63□□□□□ -1.35
LMNB1-205ENST00000472034 PRR36Q9H6K5 1346 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 TMEM134Q9H6X4 195 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
LMNB1-205ENST00000472034 KNDC1Q76NI1 1749 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 CRB1P82279 1406 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 ABCC11Q96J66 1382 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 ADGRF5Q8IZF2 1346 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 SOWAHBA6NEL2 793 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 C3orf80F5H4A9 247 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 AMHR2Q16671 573 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 SWT1Q5T5J6 900 aaKnown RBP6.62□□□□□ -1.35
LMNB1-205ENST00000472034 RNF166Q96A37 237 aaPredicted RBP6.62□□□□□ -1.35
LMNB1-205ENST00000472034 GPCPD1Q9NPB8 672 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 BTAF1O14981 1849 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 WNK3Q9BYP7 1800 aa6.62□□□□□ -1.35
LMNB1-205ENST00000472034 NHSQ6T4R5 1651 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 CICQ96RK0 1608 aaPredicted RBP6.61□□□□□ -1.35
LMNB1-205ENST00000472034 KCPQ6ZWJ8 1503 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 LBX1P52954 281 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 PPP4CP60510 307 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 MDM2Q00987 491 aaPredicted RBP6.61□□□□□ -1.35
LMNB1-205ENST00000472034 COL23A1Q86Y22 540 aaPredicted RBP6.61□□□□□ -1.35
LMNB1-205ENST00000472034 HIRIP3Q9BW71 556 aaPredicted RBP6.61□□□□□ -1.35
LMNB1-205ENST00000472034 RRAGCQ9HB90 399 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 TFCP2L1Q9NZI6 479 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 MKRN1Q9UHC7 482 aaKnown RBP6.61□□□□□ -1.35
LMNB1-205ENST00000472034 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 KIF1BO60333 1816 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 PPLO60437 1756 aa6.61□□□□□ -1.35
LMNB1-205ENST00000472034 ZBTB7CA1YPR0 619 aa6.6□□□□□ -1.35
LMNB1-205ENST00000472034 PDE4DQ08499 809 aa6.6□□□□□ -1.35
LMNB1-205ENST00000472034 PRR14Q9BWN1 585 aa6.6□□□□□ -1.35
LMNB1-205ENST00000472034 TSR3Q9UJK0 312 aaKnown RBP6.6□□□□□ -1.35
LMNB1-205ENST00000472034 ANKARQ7Z5J8 1434 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 VPS8Q8N3P4 1428 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.35
LMNB1-205ENST00000472034 DDX11L8A8MPP1 907 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
LMNB1-205ENST00000472034 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 SMIM5Q71RC9 77 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms