RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 IL13P35225 146 aa27.13■■□□□ 1.93
CCDC78-208ENST00000471861 NFIXQ14938 502 aa27.13■■□□□ 1.93
CCDC78-208ENST00000471861 TIAM2Q8IVF5 1701 aa27.13■■□□□ 1.93
CCDC78-208ENST00000471861 COL15A1P39059 1388 aa27.12■■□□□ 1.93
CCDC78-208ENST00000471861 ZPR1O75312 459 aa27.12■■□□□ 1.93
CCDC78-208ENST00000471861 CYP19A1P11511 503 aaPredicted RBP27.12■■□□□ 1.93
CCDC78-208ENST00000471861 BCL2L12Q9HB09 334 aa27.12■■□□□ 1.93
CCDC78-208ENST00000471861 CARMIL3Q8ND23 1372 aa27.11■■□□□ 1.93
CCDC78-208ENST00000471861 SLC52A2Q9HAB3 445 aa27.11■■□□□ 1.93
CCDC78-208ENST00000471861 LGR6Q9HBX8 967 aa27.11■■□□□ 1.93
CCDC78-208ENST00000471861 SLC39A6Q13433 755 aa27.1■■□□□ 1.93
CCDC78-208ENST00000471861 AKAP4Q5JQC9 854 aa27.1■■□□□ 1.93
CCDC78-208ENST00000471861 MORC1Q86VD1 984 aa27.1■■□□□ 1.93
CCDC78-208ENST00000471861 NARFQ9UHQ1 456 aa27.1■■□□□ 1.93
CCDC78-208ENST00000471861 ZBTB1Q9Y2K1 713 aa27.1■■□□□ 1.93
CCDC78-208ENST00000471861 LMNB1P20700 586 aa27.09■■□□□ 1.93
CCDC78-208ENST00000471861 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
CCDC78-208ENST00000471861 GLTPD2A6NH11 291 aa27.08■■□□□ 1.93
CCDC78-208ENST00000471861 VIRMAQ69YN4 1812 aaKnown RBP27.07■■□□□ 1.92
CCDC78-208ENST00000471861 CAPN15O75808 1086 aa27.07■■□□□ 1.92
CCDC78-208ENST00000471861 NFKBIEO00221 500 aa27.06■■□□□ 1.92
CCDC78-208ENST00000471861 RNMTO43148 476 aaKnown RBP27.05■■□□□ 1.92
CCDC78-208ENST00000471861 SERPINB2P05120 415 aa27.05■■□□□ 1.92
CCDC78-208ENST00000471861 HSPA5P11021 654 aaKnown RBP27.05■■□□□ 1.92
CCDC78-208ENST00000471861 TNS4Q8IZW8 715 aa27.05■■□□□ 1.92
CCDC78-208ENST00000471861 UBR2Q8IWV8 1755 aa27.04■■□□□ 1.92
CCDC78-208ENST00000471861 VEGFAP15692 232 aaPredicted RBP27.04■■□□□ 1.92
CCDC78-208ENST00000471861 TTLL6Q8N841 843 aa27.04■■□□□ 1.92
CCDC78-208ENST00000471861 POTECB2RU33 542 aa27.03■■□□□ 1.92
CCDC78-208ENST00000471861 CCDC88AQ3V6T2 1871 aa27.03■■□□□ 1.92
CCDC78-208ENST00000471861 C2CD5Q86YS7 1000 aa27.02■■□□□ 1.92
CCDC78-208ENST00000471861 ANKRD31Q8N7Z5 1873 aa27.02■■□□□ 1.92
CCDC78-208ENST00000471861 HSPA1AP0DMV8 641 aaKnown RBP27.01■■□□□ 1.91
CCDC78-208ENST00000471861 HSPA1BP0DMV9 641 aaKnown RBP27.01■■□□□ 1.91
CCDC78-208ENST00000471861 COL11A2P13942 1736 aaPredicted RBP27.01■■□□□ 1.91
CCDC78-208ENST00000471861 EIF4G2P78344 907 aaKnown RBP eCLIP27■■□□□ 1.91
CCDC78-208ENST00000471861 SCN7AQ01118 1682 aa26.99■■□□□ 1.91
CCDC78-208ENST00000471861 HMOX1P09601 288 aa26.98■■□□□ 1.91
CCDC78-208ENST00000471861 TRIM26Q12899 539 aaPredicted RBP26.98■■□□□ 1.91
CCDC78-208ENST00000471861 VSIG10Q8N0Z9 540 aa26.98■■□□□ 1.91
CCDC78-208ENST00000471861 MTHFSDQ2M296 383 aaKnown RBP26.97■■□□□ 1.91
CCDC78-208ENST00000471861 H0YIN7 160 aa26.96■■□□□ 1.91
CCDC78-208ENST00000471861 CANXP27824 592 aaKnown RBP26.96■■□□□ 1.91
CCDC78-208ENST00000471861 AMER1Q5JTC6 1135 aaPredicted RBP26.96■■□□□ 1.91
CCDC78-208ENST00000471861 BICDL1Q6ZP65 573 aa26.96■■□□□ 1.91
CCDC78-208ENST00000471861 EIF5P55010 431 aaKnown RBP26.95■■□□□ 1.9
CCDC78-208ENST00000471861 FER1L6Q2WGJ9 1857 aa26.95■■□□□ 1.9
CCDC78-208ENST00000471861 TBC1D9BQ66K14 1250 aa26.94■■□□□ 1.9
CCDC78-208ENST00000471861 KNSTRNQ9Y448 316 aa26.94■■□□□ 1.9
CCDC78-208ENST00000471861 DICER1Q9UPY3 1922 aaKnown RBP26.93■■□□□ 1.9
CCDC78-208ENST00000471861 CLSPNQ9HAW4 1339 aa26.91■■□□□ 1.9
CCDC78-208ENST00000471861 PRR5LQ6MZQ0 368 aa26.91■■□□□ 1.9
CCDC78-208ENST00000471861 CCDC24Q8N4L8 307 aa26.91■■□□□ 1.9
CCDC78-208ENST00000471861 C21orf2O43822 256 aa26.9■■□□□ 1.9
CCDC78-208ENST00000471861 ZNF219Q9P2Y4 722 aaPredicted RBP26.9■■□□□ 1.9
CCDC78-208ENST00000471861 POTEIP0CG38 1075 aa26.89■■□□□ 1.9
CCDC78-208ENST00000471861 POTEJP0CG39 1038 aa26.89■■□□□ 1.9
CCDC78-208ENST00000471861 ZNF622Q969S3 477 aaKnown RBP eCLIP26.89■■□□□ 1.9
CCDC78-208ENST00000471861 ERFEQ4G0M1 354 aa26.88■■□□□ 1.89
CCDC78-208ENST00000471861 ZNF496Q96IT1 587 aaPredicted RBP26.88■■□□□ 1.89
CCDC78-208ENST00000471861 BRIP1Q9BX63 1249 aa26.88■■□□□ 1.89
CCDC78-208ENST00000471861 SIPA1L3O60292 1781 aaPredicted RBP26.87■■□□□ 1.89
CCDC78-208ENST00000471861 STARD3NLO95772 234 aa26.87■■□□□ 1.89
CCDC78-208ENST00000471861 DPY19L2Q6NUT2 758 aa26.87■■□□□ 1.89
CCDC78-208ENST00000471861 LTBP3Q9NS15 1303 aa26.87■■□□□ 1.89
CCDC78-208ENST00000471861 HEG1Q9ULI3 1381 aa26.86■■□□□ 1.89
CCDC78-208ENST00000471861 A0A087WZG4 1122 aa26.86■■□□□ 1.89
CCDC78-208ENST00000471861 PDE6BP35913 854 aa26.85■■□□□ 1.89
CCDC78-208ENST00000471861 TTC5Q8N0Z6 440 aa26.85■■□□□ 1.89
CCDC78-208ENST00000471861 TBC1D2BQ9UPU7 963 aa26.85■■□□□ 1.89
CCDC78-208ENST00000471861 COL3A1P02461 1466 aaPredicted RBP26.85■■□□□ 1.89
CCDC78-208ENST00000471861 SLX4Q8IY92 1834 aa26.85■■□□□ 1.89
CCDC78-208ENST00000471861 CREBZFQ9NS37 354 aa26.84■■□□□ 1.89
CCDC78-208ENST00000471861 PDZRN3Q9UPQ7 1066 aa26.84■■□□□ 1.89
CCDC78-208ENST00000471861 BCORQ6W2J9 1755 aa26.84■■□□□ 1.89
CCDC78-208ENST00000471861 ARFGEF2Q9Y6D5 1785 aa26.84■■□□□ 1.89
CCDC78-208ENST00000471861 CACNA1SQ13698 1873 aa26.83■■□□□ 1.89
CCDC78-208ENST00000471861 DDNO94850 711 aaPredicted RBP26.83■■□□□ 1.89
CCDC78-208ENST00000471861 CHADLQ6NUI6 762 aa26.83■■□□□ 1.89
CCDC78-208ENST00000471861 ZNF790Q6PG37 636 aa26.83■■□□□ 1.89
CCDC78-208ENST00000471861 TAOK3Q9H2K8 898 aa26.83■■□□□ 1.89
CCDC78-208ENST00000471861 MKRN1Q9UHC7 482 aaKnown RBP26.83■■□□□ 1.89
CCDC78-208ENST00000471861 DIAPH1O60610 1272 aaKnown RBP26.82■■□□□ 1.88
CCDC78-208ENST00000471861 IL17REQ8NFR9 667 aa26.82■■□□□ 1.88
CCDC78-208ENST00000471861 ZNF330Q9Y3S2 320 aaPredicted RBP26.82■■□□□ 1.88
CCDC78-208ENST00000471861 CAMTA2O94983 1202 aa26.81■■□□□ 1.88
CCDC78-208ENST00000471861 IL6STP40189 918 aaPredicted RBP26.8■■□□□ 1.88
CCDC78-208ENST00000471861 PRPF40BQ6NWY9 871 aaKnown RBP26.8■■□□□ 1.88
CCDC78-208ENST00000471861 SRGNP10124 158 aa26.79■■□□□ 1.88
CCDC78-208ENST00000471861 CNBD1Q8NA66 436 aa26.79■■□□□ 1.88
CCDC78-208ENST00000471861 A1BGP04217 495 aa26.78■■□□□ 1.88
CCDC78-208ENST00000471861 STYK1Q6J9G0 422 aa26.78■■□□□ 1.88
CCDC78-208ENST00000471861 PCGF6Q9BYE7 350 aa26.78■■□□□ 1.88
CCDC78-208ENST00000471861 KIF7Q2M1P5 1343 aa26.78■■□□□ 1.88
CCDC78-208ENST00000471861 CNTNAP1P78357 1384 aa26.77■■□□□ 1.88
CCDC78-208ENST00000471861 PASKQ96RG2 1323 aa26.77■■□□□ 1.88
CCDC78-208ENST00000471861 PER1O15534 1290 aaPredicted RBP26.77■■□□□ 1.88
CCDC78-208ENST00000471861 CNKSR1Q969H4 720 aa26.77■■□□□ 1.88
CCDC78-208ENST00000471861 TEFQ10587 303 aa26.76■■□□□ 1.87
CCDC78-208ENST00000471861 TEX13AQ9BXU3 409 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms