RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 COL5A3P25940 1745 aaPredicted RBP19.71■□□□□ 0.75
HOXB3-206ENST00000471459 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
HOXB3-206ENST00000471459 ZNF330Q9Y3S2 320 aaPredicted RBP19.7■□□□□ 0.74
HOXB3-206ENST00000471459 ADAMTS7Q9UKP4 1686 aa19.7■□□□□ 0.74
HOXB3-206ENST00000471459 KCPQ6ZWJ8 1503 aa19.7■□□□□ 0.74
HOXB3-206ENST00000471459 SNRPA1P09661 255 aaKnown RBP19.69■□□□□ 0.74
HOXB3-206ENST00000471459 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
HOXB3-206ENST00000471459 COL15A1P39059 1388 aa19.69■□□□□ 0.74
HOXB3-206ENST00000471459 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
HOXB3-206ENST00000471459 A0A0G2JLW4 131 aa19.67■□□□□ 0.74
HOXB3-206ENST00000471459 KCNQ3O43525 872 aa19.67■□□□□ 0.74
HOXB3-206ENST00000471459 TM4SF1P30408 202 aa19.67■□□□□ 0.74
HOXB3-206ENST00000471459 IL6STP40189 918 aaPredicted RBP19.67■□□□□ 0.74
HOXB3-206ENST00000471459 EIF5P55010 431 aaKnown RBP19.67■□□□□ 0.74
HOXB3-206ENST00000471459 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
HOXB3-206ENST00000471459 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
HOXB3-206ENST00000471459 MYH14Q7Z406 1995 aaKnown RBP19.66■□□□□ 0.74
HOXB3-206ENST00000471459 TJP1Q07157 1748 aa19.66■□□□□ 0.74
HOXB3-206ENST00000471459 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
HOXB3-206ENST00000471459 CICQ96RK0 1608 aaPredicted RBP19.65■□□□□ 0.74
HOXB3-206ENST00000471459 A1BGP04217 495 aa19.65■□□□□ 0.74
HOXB3-206ENST00000471459 POLRMTO00411 1230 aaKnown RBP19.64■□□□□ 0.73
HOXB3-206ENST00000471459 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
HOXB3-206ENST00000471459 BCS1LQ9Y276 419 aa19.64■□□□□ 0.73
HOXB3-206ENST00000471459 USP16Q9Y5T5 823 aa19.64■□□□□ 0.73
HOXB3-206ENST00000471459 DPEP1P16444 411 aa19.63■□□□□ 0.73
HOXB3-206ENST00000471459 RIPK4P57078 832 aa19.63■□□□□ 0.73
HOXB3-206ENST00000471459 DDR1Q08345 913 aa19.63■□□□□ 0.73
HOXB3-206ENST00000471459 NFIXQ14938 502 aa19.63■□□□□ 0.73
HOXB3-206ENST00000471459 PIM2Q9P1W9 311 aa19.63■□□□□ 0.73
HOXB3-206ENST00000471459 TBC1D2BQ9UPU7 963 aa19.63■□□□□ 0.73
HOXB3-206ENST00000471459 C10orf71Q711Q0 1435 aa19.62■□□□□ 0.73
HOXB3-206ENST00000471459 SERPINB2P05120 415 aa19.62■□□□□ 0.73
HOXB3-206ENST00000471459 BICDL1Q6ZP65 573 aa19.62■□□□□ 0.73
HOXB3-206ENST00000471459 MIS18AQ9NYP9 233 aa19.62■□□□□ 0.73
HOXB3-206ENST00000471459 VIRMAQ69YN4 1812 aaKnown RBP19.6■□□□□ 0.73
HOXB3-206ENST00000471459 NPHP1O15259 732 aa19.6■□□□□ 0.73
HOXB3-206ENST00000471459 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
HOXB3-206ENST00000471459 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
HOXB3-206ENST00000471459 C4AP0C0L4 1744 aa19.59■□□□□ 0.73
HOXB3-206ENST00000471459 DALRD3Q5D0E6 543 aaKnown RBP19.59■□□□□ 0.73
HOXB3-206ENST00000471459 SETDB2Q96T68 719 aa19.59■□□□□ 0.73
HOXB3-206ENST00000471459 BCL2L12Q9HB09 334 aa19.59■□□□□ 0.73
HOXB3-206ENST00000471459 ZNF652Q9Y2D9 606 aa19.59■□□□□ 0.73
HOXB3-206ENST00000471459 UBR2Q8IWV8 1755 aa19.59■□□□□ 0.73
HOXB3-206ENST00000471459 PXDNLA1KZ92 1463 aa19.59■□□□□ 0.73
HOXB3-206ENST00000471459 ARHGAP27Q6ZUM4 889 aa19.58■□□□□ 0.72
HOXB3-206ENST00000471459 RUNDC1Q96C34 613 aa19.58■□□□□ 0.72
HOXB3-206ENST00000471459 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.72
HOXB3-206ENST00000471459 CHD4Q14839 1912 aa19.58■□□□□ 0.72
HOXB3-206ENST00000471459 PRAMEF22A3QJZ6 481 aa19.57■□□□□ 0.72
HOXB3-206ENST00000471459 TMPOP42166 694 aaKnown RBP19.57■□□□□ 0.72
HOXB3-206ENST00000471459 NEUROD2Q15784 382 aa19.56■□□□□ 0.72
HOXB3-206ENST00000471459 TBC1D9BQ66K14 1250 aa19.56■□□□□ 0.72
HOXB3-206ENST00000471459 CLEC4GQ6UXB4 293 aa19.56■□□□□ 0.72
HOXB3-206ENST00000471459 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
HOXB3-206ENST00000471459 TSPYL4Q9UJ04 414 aa19.56■□□□□ 0.72
HOXB3-206ENST00000471459 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
HOXB3-206ENST00000471459 SIPA1L3O60292 1781 aaPredicted RBP19.56■□□□□ 0.72
HOXB3-206ENST00000471459 H0YIN7 160 aa19.55■□□□□ 0.72
HOXB3-206ENST00000471459 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
HOXB3-206ENST00000471459 CAMTA2O94983 1202 aa19.55■□□□□ 0.72
HOXB3-206ENST00000471459 KCNA3P22001 575 aa19.55■□□□□ 0.72
HOXB3-206ENST00000471459 CHRNA5P30532 468 aa19.55■□□□□ 0.72
HOXB3-206ENST00000471459 PIP4K2AP48426 406 aaPredicted RBP19.55■□□□□ 0.72
HOXB3-206ENST00000471459 EIF4A1P60842 406 aaKnown RBP19.55■□□□□ 0.72
HOXB3-206ENST00000471459 CCDC146Q8IYE0 955 aa19.55■□□□□ 0.72
HOXB3-206ENST00000471459 UTRNP46939 3433 aa19.54■□□□□ 0.72
HOXB3-206ENST00000471459 PDE6BP35913 854 aa19.54■□□□□ 0.72
HOXB3-206ENST00000471459 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
HOXB3-206ENST00000471459 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
HOXB3-206ENST00000471459 CARMIL3Q8ND23 1372 aa19.53■□□□□ 0.72
HOXB3-206ENST00000471459 RGL2O15211 777 aa19.52■□□□□ 0.72
HOXB3-206ENST00000471459 ST5P78524 1137 aa19.52■□□□□ 0.72
HOXB3-206ENST00000471459 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
HOXB3-206ENST00000471459 BRIP1Q9BX63 1249 aa19.52■□□□□ 0.72
HOXB3-206ENST00000471459 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
HOXB3-206ENST00000471459 NBPF26B4DH59 902 aa19.51■□□□□ 0.71
HOXB3-206ENST00000471459 NBPF10Q6P3W6 841 aaKnown RBP19.51■□□□□ 0.71
HOXB3-206ENST00000471459 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
HOXB3-206ENST00000471459 NBPF15Q8N660 670 aa19.51■□□□□ 0.71
HOXB3-206ENST00000471459 TTLL6Q8N841 843 aa19.51■□□□□ 0.71
HOXB3-206ENST00000471459 CNBD1Q8NA66 436 aa19.51■□□□□ 0.71
HOXB3-206ENST00000471459 GPBP1L1Q9HC44 474 aaPredicted RBP19.51■□□□□ 0.71
HOXB3-206ENST00000471459 KIF6Q6ZMV9 814 aa19.5■□□□□ 0.71
HOXB3-206ENST00000471459 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
HOXB3-206ENST00000471459 KIF13BQ9NQT8 1826 aa19.5■□□□□ 0.71
HOXB3-206ENST00000471459 GOLGB1Q14789 3259 aaKnown RBP19.49■□□□□ 0.71
HOXB3-206ENST00000471459 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
HOXB3-206ENST00000471459 TPTE2Q6XPS3 522 aa19.49■□□□□ 0.71
HOXB3-206ENST00000471459 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
HOXB3-206ENST00000471459 MYL6BP14649 208 aa19.48■□□□□ 0.71
HOXB3-206ENST00000471459 GTF2E1P29083 439 aaPredicted RBP19.48■□□□□ 0.71
HOXB3-206ENST00000471459 ZNF622Q969S3 477 aaKnown RBP eCLIP19.48■□□□□ 0.71
HOXB3-206ENST00000471459 NIP7Q9Y221 180 aaKnown RBP eCLIP19.48■□□□□ 0.71
HOXB3-206ENST00000471459 ATP10DQ9P241 1426 aa19.48■□□□□ 0.71
HOXB3-206ENST00000471459 ERBB4Q15303 1308 aa19.48■□□□□ 0.71
HOXB3-206ENST00000471459 ERVV-1B6SEH8 477 aa19.47■□□□□ 0.71
HOXB3-206ENST00000471459 EIF2S2P20042 333 aaKnown RBP19.47■□□□□ 0.71
HOXB3-206ENST00000471459 ZNF526Q8TF50 670 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms