RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
CPSF4-211ENST00000471455 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
CPSF4-211ENST00000471455 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
CPSF4-211ENST00000471455 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
CPSF4-211ENST00000471455 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
CPSF4-211ENST00000471455 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
CPSF4-211ENST00000471455 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
CPSF4-211ENST00000471455 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
CPSF4-211ENST00000471455 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
CPSF4-211ENST00000471455 ADCY9O60503 1353 aa12.57□□□□□ -0.4
CPSF4-211ENST00000471455 GNPATO15228 680 aa12.57□□□□□ -0.4
CPSF4-211ENST00000471455 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
CPSF4-211ENST00000471455 PHKG2P15735 406 aa12.56□□□□□ -0.4
CPSF4-211ENST00000471455 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
CPSF4-211ENST00000471455 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
CPSF4-211ENST00000471455 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
CPSF4-211ENST00000471455 EYA1Q99502 592 aa12.56□□□□□ -0.4
CPSF4-211ENST00000471455 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
CPSF4-211ENST00000471455 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
CPSF4-211ENST00000471455 GOLGB1Q14789 3259 aaKnown RBP12.55□□□□□ -0.4
CPSF4-211ENST00000471455 MFRPQ9BY79 579 aa12.54□□□□□ -0.4
CPSF4-211ENST00000471455 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
CPSF4-211ENST00000471455 CICQ96RK0 1608 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-211ENST00000471455 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 MMP10P09238 476 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 HSPA6P17066 643 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-211ENST00000471455 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-211ENST00000471455 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 AMIGO3Q86WK7 504 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 NLGN1Q8N2Q7 840 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-211ENST00000471455 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
CPSF4-211ENST00000471455 ZNF831Q5JPB2 1677 aa12.52□□□□□ -0.4
CPSF4-211ENST00000471455 ITPK1Q13572 414 aa12.52□□□□□ -0.41
CPSF4-211ENST00000471455 DCAF5Q96JK2 942 aa12.52□□□□□ -0.41
CPSF4-211ENST00000471455 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
CPSF4-211ENST00000471455 KDRP35968 1356 aa12.52□□□□□ -0.41
CPSF4-211ENST00000471455 TGFB2P61812 414 aa12.51□□□□□ -0.41
CPSF4-211ENST00000471455 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
CPSF4-211ENST00000471455 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
CPSF4-211ENST00000471455 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-211ENST00000471455 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
CPSF4-211ENST00000471455 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
CPSF4-211ENST00000471455 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
CPSF4-211ENST00000471455 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
CPSF4-211ENST00000471455 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
CPSF4-211ENST00000471455 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
CPSF4-211ENST00000471455 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
CPSF4-211ENST00000471455 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
CPSF4-211ENST00000471455 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
CPSF4-211ENST00000471455 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
CPSF4-211ENST00000471455 PXDNLA1KZ92 1463 aa12.5□□□□□ -0.41
CPSF4-211ENST00000471455 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
CPSF4-211ENST00000471455 RFC4P35249 363 aa12.49□□□□□ -0.41
CPSF4-211ENST00000471455 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
CPSF4-211ENST00000471455 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
CPSF4-211ENST00000471455 CABP4P57796 275 aa12.48□□□□□ -0.41
CPSF4-211ENST00000471455 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-211ENST00000471455 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
CPSF4-211ENST00000471455 BCS1LQ9Y276 419 aa12.48□□□□□ -0.41
CPSF4-211ENST00000471455 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
CPSF4-211ENST00000471455 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
CPSF4-211ENST00000471455 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
CPSF4-211ENST00000471455 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-211ENST00000471455 MTHFSP49914 203 aa12.46□□□□□ -0.41
CPSF4-211ENST00000471455 APLP1P51693 650 aa12.46□□□□□ -0.41
CPSF4-211ENST00000471455 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPSF4-211ENST00000471455 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
CPSF4-211ENST00000471455 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-211ENST00000471455 KIF3CO14782 793 aa12.45□□□□□ -0.42
CPSF4-211ENST00000471455 GYS1P13807 737 aa12.45□□□□□ -0.42
CPSF4-211ENST00000471455 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-211ENST00000471455 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
CPSF4-211ENST00000471455 TOMM70O94826 608 aa12.44□□□□□ -0.42
CPSF4-211ENST00000471455 FCHSD2O94868 740 aa12.44□□□□□ -0.42
CPSF4-211ENST00000471455 ARHGAP27Q6ZUM4 889 aa12.44□□□□□ -0.42
CPSF4-211ENST00000471455 MORC1Q86VD1 984 aa12.44□□□□□ -0.42
CPSF4-211ENST00000471455 KIAA1551Q9HCM1 1747 aa12.44□□□□□ -0.42
CPSF4-211ENST00000471455 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-211ENST00000471455 DPEP1P16444 411 aa12.43□□□□□ -0.42
CPSF4-211ENST00000471455 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-211ENST00000471455 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-211ENST00000471455 SLC4A9Q96Q91 983 aa12.43□□□□□ -0.42
CPSF4-211ENST00000471455 PANK3Q9H999 370 aa12.43□□□□□ -0.42
CPSF4-211ENST00000471455 PIM2Q9P1W9 311 aa12.43□□□□□ -0.42
CPSF4-211ENST00000471455 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
CPSF4-211ENST00000471455 CEP350Q5VT06 3117 aa12.43□□□□□ -0.42
CPSF4-211ENST00000471455 PTCD1O75127 700 aaKnown RBP12.42□□□□□ -0.42
CPSF4-211ENST00000471455 CRKLP46109 303 aaKnown RBP12.42□□□□□ -0.42
CPSF4-211ENST00000471455 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
CPSF4-211ENST00000471455 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
CPSF4-211ENST00000471455 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
CPSF4-211ENST00000471455 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
CPSF4-211ENST00000471455 DALRD3Q5D0E6 543 aaKnown RBP12.41□□□□□ -0.42
CPSF4-211ENST00000471455 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
CPSF4-211ENST00000471455 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
CPSF4-211ENST00000471455 ZPR1O75312 459 aa12.4□□□□□ -0.42
CPSF4-211ENST00000471455 AEBP1Q8IUX7 1158 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms