RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ATP6V1AP38606 617 aa11.77□□□□□ -0.53
PTPRE-207ENST00000471218 PDE3AQ14432 1141 aa11.77□□□□□ -0.53
PTPRE-207ENST00000471218 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
PTPRE-207ENST00000471218 PPP4R2Q9NY27 417 aa11.77□□□□□ -0.53
PTPRE-207ENST00000471218 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
PTPRE-207ENST00000471218 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
PTPRE-207ENST00000471218 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 C5P01031 1676 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 CHL1O00533 1208 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 GNPATO15228 680 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
PTPRE-207ENST00000471218 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
PTPRE-207ENST00000471218 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 ADCY9O60503 1353 aa11.76□□□□□ -0.53
PTPRE-207ENST00000471218 APLP1P51693 650 aa11.75□□□□□ -0.53
PTPRE-207ENST00000471218 RARSP54136 660 aaKnown RBP11.75□□□□□ -0.53
PTPRE-207ENST00000471218 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
PTPRE-207ENST00000471218 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
PTPRE-207ENST00000471218 KIF16BQ96L93 1317 aa11.75□□□□□ -0.53
PTPRE-207ENST00000471218 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
PTPRE-207ENST00000471218 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
PTPRE-207ENST00000471218 TOMM70O94826 608 aa11.74□□□□□ -0.53
PTPRE-207ENST00000471218 PHKG2P15735 406 aa11.74□□□□□ -0.53
PTPRE-207ENST00000471218 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
PTPRE-207ENST00000471218 MMP10P09238 476 aa11.73□□□□□ -0.53
PTPRE-207ENST00000471218 RFC4P35249 363 aa11.73□□□□□ -0.53
PTPRE-207ENST00000471218 TAF1LQ8IZX4 1826 aa11.73□□□□□ -0.53
PTPRE-207ENST00000471218 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
PTPRE-207ENST00000471218 ZNF526Q8TF50 670 aaPredicted RBP11.73□□□□□ -0.53
PTPRE-207ENST00000471218 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
PTPRE-207ENST00000471218 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
PTPRE-207ENST00000471218 ADAMTS7Q9UKP4 1686 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 IPO8O15397 1037 aaKnown RBP11.72□□□□□ -0.53
PTPRE-207ENST00000471218 HOXB7P09629 217 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 DLG5Q8TDM6 1919 aa11.72□□□□□ -0.53
PTPRE-207ENST00000471218 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
PTPRE-207ENST00000471218 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.53
PTPRE-207ENST00000471218 C16orf71Q8IYS4 520 aaPredicted RBP11.71□□□□□ -0.53
PTPRE-207ENST00000471218 CNTNAP4Q9C0A0 1308 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 KIF3CO14782 793 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 CABP4P57796 275 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-207ENST00000471218 ZNF530Q6P9A1 599 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-207ENST00000471218 ARHGAP27Q6ZUM4 889 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
PTPRE-207ENST00000471218 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
PTPRE-207ENST00000471218 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 UBR3Q6ZT12 1888 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 ITGB4P16144 1822 aa11.7□□□□□ -0.54
PTPRE-207ENST00000471218 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
PTPRE-207ENST00000471218 ITPK1Q13572 414 aa11.69□□□□□ -0.54
PTPRE-207ENST00000471218 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
PTPRE-207ENST00000471218 CHMP4BQ9H444 224 aaKnown RBP11.69□□□□□ -0.54
PTPRE-207ENST00000471218 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
PTPRE-207ENST00000471218 MRC1P22897 1456 aa11.69□□□□□ -0.54
PTPRE-207ENST00000471218 KDM2BQ8NHM5 1336 aa11.68□□□□□ -0.54
PTPRE-207ENST00000471218 VAMP4O75379 141 aa11.68□□□□□ -0.54
PTPRE-207ENST00000471218 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-207ENST00000471218 ZKSCAN2Q63HK3 967 aa11.68□□□□□ -0.54
PTPRE-207ENST00000471218 MCM10Q7L590 875 aa11.68□□□□□ -0.54
PTPRE-207ENST00000471218 SMC4Q9NTJ3 1288 aa11.68□□□□□ -0.54
PTPRE-207ENST00000471218 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
PTPRE-207ENST00000471218 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
PTPRE-207ENST00000471218 FSTL1Q12841 308 aa11.67□□□□□ -0.54
PTPRE-207ENST00000471218 AMIGO3Q86WK7 504 aa11.67□□□□□ -0.54
PTPRE-207ENST00000471218 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
PTPRE-207ENST00000471218 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
PTPRE-207ENST00000471218 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
PTPRE-207ENST00000471218 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
PTPRE-207ENST00000471218 BCAR3O75815 825 aa11.66□□□□□ -0.54
PTPRE-207ENST00000471218 GYS1P13807 737 aa11.66□□□□□ -0.54
PTPRE-207ENST00000471218 TEFQ10587 303 aa11.66□□□□□ -0.54
PTPRE-207ENST00000471218 DALRD3Q5D0E6 543 aaKnown RBP11.66□□□□□ -0.54
PTPRE-207ENST00000471218 SSH1Q8WYL5 1049 aa11.66□□□□□ -0.54
PTPRE-207ENST00000471218 PTPRCP08575 1304 aa11.65□□□□□ -0.54
PTPRE-207ENST00000471218 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
PTPRE-207ENST00000471218 RNMTO43148 476 aaKnown RBP11.65□□□□□ -0.54
PTPRE-207ENST00000471218 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
PTPRE-207ENST00000471218 ATF7IPQ6VMQ6 1270 aa11.65□□□□□ -0.54
PTPRE-207ENST00000471218 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
PTPRE-207ENST00000471218 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
PTPRE-207ENST00000471218 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.55
PTPRE-207ENST00000471218 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
PTPRE-207ENST00000471218 PXDNLA1KZ92 1463 aa11.64□□□□□ -0.55
PTPRE-207ENST00000471218 C10orf71Q711Q0 1435 aa11.64□□□□□ -0.55
PTPRE-207ENST00000471218 ZPR1O75312 459 aa11.64□□□□□ -0.55
PTPRE-207ENST00000471218 DPEP1P16444 411 aa11.64□□□□□ -0.55
PTPRE-207ENST00000471218 API5Q9BZZ5 524 aaKnown RBP11.64□□□□□ -0.55
PTPRE-207ENST00000471218 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
PTPRE-207ENST00000471218 C9orf131Q5VYM1 1079 aa11.63□□□□□ -0.55
PTPRE-207ENST00000471218 SMIM5Q71RC9 77 aa11.63□□□□□ -0.55
PTPRE-207ENST00000471218 FTSJ3Q8IY81 847 aaKnown RBP11.63□□□□□ -0.55
PTPRE-207ENST00000471218 DZIP1LQ8IYY4 767 aaKnown RBP11.63□□□□□ -0.55
PTPRE-207ENST00000471218 MRPL50Q8N5N7 158 aaKnown RBP11.63□□□□□ -0.55
PTPRE-207ENST00000471218 CCDC136Q96JN2 1154 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms