RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 CHADLQ6NUI6 762 aa20.63■□□□□ 0.89
CNOT3-206ENST00000471126 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
CNOT3-206ENST00000471126 CCDC85CA6NKD9 419 aa20.62■□□□□ 0.89
CNOT3-206ENST00000471126 VEGFBP49765 207 aa20.62■□□□□ 0.89
CNOT3-206ENST00000471126 DDR1Q08345 913 aa20.62■□□□□ 0.89
CNOT3-206ENST00000471126 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
CNOT3-206ENST00000471126 SLC4A9Q96Q91 983 aa20.62■□□□□ 0.89
CNOT3-206ENST00000471126 ITGB4P16144 1822 aa20.62■□□□□ 0.89
CNOT3-206ENST00000471126 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
CNOT3-206ENST00000471126 FKBP8Q14318 412 aa20.6■□□□□ 0.89
CNOT3-206ENST00000471126 DPY19L2Q6NUT2 758 aa20.6■□□□□ 0.89
CNOT3-206ENST00000471126 RBM42Q9BTD8 480 aaKnown RBP20.6■□□□□ 0.89
CNOT3-206ENST00000471126 SPG7Q9UQ90 795 aa20.6■□□□□ 0.89
CNOT3-206ENST00000471126 SBF1O95248 1867 aa20.6■□□□□ 0.89
CNOT3-206ENST00000471126 POTEIP0CG38 1075 aa20.59■□□□□ 0.89
CNOT3-206ENST00000471126 POTEJP0CG39 1038 aa20.59■□□□□ 0.89
CNOT3-206ENST00000471126 HSPA8P11142 646 aaKnown RBP20.59■□□□□ 0.89
CNOT3-206ENST00000471126 SRP68Q9UHB9 627 aaKnown RBP20.59■□□□□ 0.89
CNOT3-206ENST00000471126 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.89
CNOT3-206ENST00000471126 RALBP1Q15311 655 aa20.58■□□□□ 0.89
CNOT3-206ENST00000471126 AEBP1Q8IUX7 1158 aa20.58■□□□□ 0.89
CNOT3-206ENST00000471126 CNTNAP4Q9C0A0 1308 aa20.57■□□□□ 0.88
CNOT3-206ENST00000471126 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
CNOT3-206ENST00000471126 NFKBIEO00221 500 aa20.54■□□□□ 0.88
CNOT3-206ENST00000471126 POLRMTO00411 1230 aaKnown RBP20.54■□□□□ 0.88
CNOT3-206ENST00000471126 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
CNOT3-206ENST00000471126 PHKG2P15735 406 aa20.53■□□□□ 0.88
CNOT3-206ENST00000471126 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
CNOT3-206ENST00000471126 USP42Q9H9J4 1324 aaKnown RBP20.53■□□□□ 0.88
CNOT3-206ENST00000471126 TMEM88BA6NKF7 163 aa20.52■□□□□ 0.88
CNOT3-206ENST00000471126 TM4SF1P30408 202 aa20.52■□□□□ 0.88
CNOT3-206ENST00000471126 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
CNOT3-206ENST00000471126 CFAP53Q96M91 514 aa20.52■□□□□ 0.88
CNOT3-206ENST00000471126 AMOTQ4VCS5 1084 aa20.51■□□□□ 0.87
CNOT3-206ENST00000471126 TTLL6Q8N841 843 aa20.51■□□□□ 0.87
CNOT3-206ENST00000471126 ADAMTS7Q9UKP4 1686 aa20.5■□□□□ 0.87
CNOT3-206ENST00000471126 DDNO94850 711 aaPredicted RBP20.49■□□□□ 0.87
CNOT3-206ENST00000471126 ERFEQ4G0M1 354 aa20.49■□□□□ 0.87
CNOT3-206ENST00000471126 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
CNOT3-206ENST00000471126 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
CNOT3-206ENST00000471126 CRKLP46109 303 aaKnown RBP20.48■□□□□ 0.87
CNOT3-206ENST00000471126 MAP2K1Q02750 393 aaPredicted RBP20.48■□□□□ 0.87
CNOT3-206ENST00000471126 PLEKHO1Q53GL0 409 aaPredicted RBP20.48■□□□□ 0.87
CNOT3-206ENST00000471126 DEFB115Q30KQ5 88 aa20.47■□□□□ 0.87
CNOT3-206ENST00000471126 CFAP44Q96MT7 982 aa20.47■□□□□ 0.87
CNOT3-206ENST00000471126 ITGBL1O95965 494 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-206ENST00000471126 HMOX1P09601 288 aa20.46■□□□□ 0.87
CNOT3-206ENST00000471126 LDHDQ86WU2 507 aa20.46■□□□□ 0.87
CNOT3-206ENST00000471126 RSPH6AQ9H0K4 717 aa20.46■□□□□ 0.87
CNOT3-206ENST00000471126 C2CD5Q86YS7 1000 aa20.45■□□□□ 0.86
CNOT3-206ENST00000471126 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
CNOT3-206ENST00000471126 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
CNOT3-206ENST00000471126 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
CNOT3-206ENST00000471126 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
CNOT3-206ENST00000471126 WDR33Q9C0J8 1336 aaKnown RBP20.44■□□□□ 0.86
CNOT3-206ENST00000471126 RASSF10A6NK89 507 aa20.43■□□□□ 0.86
CNOT3-206ENST00000471126 ERVV-2B6SEH9 535 aa20.43■□□□□ 0.86
CNOT3-206ENST00000471126 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
CNOT3-206ENST00000471126 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
CNOT3-206ENST00000471126 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
CNOT3-206ENST00000471126 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
CNOT3-206ENST00000471126 TIAM2Q8IVF5 1701 aa20.43■□□□□ 0.86
CNOT3-206ENST00000471126 MRC1P22897 1456 aa20.43■□□□□ 0.86
CNOT3-206ENST00000471126 ZPR1O75312 459 aa20.42■□□□□ 0.86
CNOT3-206ENST00000471126 H0YIN7 160 aa20.41■□□□□ 0.86
CNOT3-206ENST00000471126 NFIXQ14938 502 aa20.41■□□□□ 0.86
CNOT3-206ENST00000471126 TAF1DQ9H5J8 278 aaPredicted RBP20.41■□□□□ 0.86
CNOT3-206ENST00000471126 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
CNOT3-206ENST00000471126 IQCA1LA6NCM1 817 aa20.4■□□□□ 0.86
CNOT3-206ENST00000471126 C21orf2O43822 256 aa20.4■□□□□ 0.86
CNOT3-206ENST00000471126 SERPINB2P05120 415 aa20.4■□□□□ 0.86
CNOT3-206ENST00000471126 MTHFSDQ2M296 383 aaKnown RBP20.4■□□□□ 0.86
CNOT3-206ENST00000471126 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
CNOT3-206ENST00000471126 INTS5Q6P9B9 1019 aaKnown RBP20.39■□□□□ 0.85
CNOT3-206ENST00000471126 MYH14Q7Z406 1995 aaKnown RBP20.38■□□□□ 0.85
CNOT3-206ENST00000471126 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
CNOT3-206ENST00000471126 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
CNOT3-206ENST00000471126 CABP4P57796 275 aa20.38■□□□□ 0.85
CNOT3-206ENST00000471126 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
CNOT3-206ENST00000471126 EAPPQ56P03 285 aaPredicted RBP20.38■□□□□ 0.85
CNOT3-206ENST00000471126 COL5A3P25940 1745 aaPredicted RBP20.38■□□□□ 0.85
CNOT3-206ENST00000471126 ZNF831Q5JPB2 1677 aa20.38■□□□□ 0.85
CNOT3-206ENST00000471126 C1orf141Q5JVX7 400 aa20.37■□□□□ 0.85
CNOT3-206ENST00000471126 ZNF622Q969S3 477 aaKnown RBP eCLIP20.37■□□□□ 0.851e-6■□□□□ 9.8
CNOT3-206ENST00000471126 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
CNOT3-206ENST00000471126 BEGAINQ9BUH8 593 aa20.37■□□□□ 0.85
CNOT3-206ENST00000471126 ABT1Q9ULW3 272 aaKnown RBP20.37■□□□□ 0.85
CNOT3-206ENST00000471126 CLEC11AQ9Y240 323 aa20.37■□□□□ 0.85
CNOT3-206ENST00000471126 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
CNOT3-206ENST00000471126 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-206ENST00000471126 PLEKHF1Q96S99 279 aa20.35■□□□□ 0.85
CNOT3-206ENST00000471126 MCOLN1Q9GZU1 580 aa20.35■□□□□ 0.85
CNOT3-206ENST00000471126 TAOK3Q9H2K8 898 aa20.35■□□□□ 0.85
CNOT3-206ENST00000471126 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
CNOT3-206ENST00000471126 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
CNOT3-206ENST00000471126 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
CNOT3-206ENST00000471126 CCDC88AQ3V6T2 1871 aa20.34■□□□□ 0.85
CNOT3-206ENST00000471126 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
CNOT3-206ENST00000471126 LTBP3Q9NS15 1303 aa20.33■□□□□ 0.85
CNOT3-206ENST00000471126 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms