RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
RRP1B-202ENST00000470886 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 IL1RAPL2Q9NP60 686 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 UBE2HP62256 183 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 TNRQ92752 1358 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
RRP1B-202ENST00000470886 NLRP2Q9NX02 1062 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 AATKQ6ZMQ8 1374 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 SMARCA5O60264 1052 aaPredicted RBP12.42□□□□□ -0.42
RRP1B-202ENST00000470886 ME1P48163 572 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 MCM10Q7L590 875 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 NME9Q86XW9 330 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 AK7Q96M32 723 aa12.42□□□□□ -0.42
RRP1B-202ENST00000470886 MARCH6O60337 910 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
RRP1B-202ENST00000470886 DCTPP1Q9H773 170 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
RRP1B-202ENST00000470886 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
RRP1B-202ENST00000470886 FAM135BQ49AJ0 1406 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 PIK3R4Q99570 1358 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 RLBP1P12271 317 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
RRP1B-202ENST00000470886 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
RRP1B-202ENST00000470886 FLIIQ13045 1269 aa12.4□□□□□ -0.42
RRP1B-202ENST00000470886 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
RRP1B-202ENST00000470886 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.42
RRP1B-202ENST00000470886 ANO10Q9NW15 660 aa12.4□□□□□ -0.42
RRP1B-202ENST00000470886 EVA1CP58658 441 aa12.4□□□□□ -0.42
RRP1B-202ENST00000470886 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
RRP1B-202ENST00000470886 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.42
RRP1B-202ENST00000470886 STX6O43752 255 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 SDSP20132 328 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 FOSBP53539 338 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
RRP1B-202ENST00000470886 WAPLQ7Z5K2 1190 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 NUTM2GQ5VZR2 741 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 PDILTQ8N807 584 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 DNAAF4Q8WXU2 420 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
RRP1B-202ENST00000470886 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
RRP1B-202ENST00000470886 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 FBXO31Q5XUX0 539 aaPredicted RBP12.38□□□□□ -0.43
RRP1B-202ENST00000470886 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
RRP1B-202ENST00000470886 SERPINC1P01008 464 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 KIDINS220Q9ULH0 1771 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
RRP1B-202ENST00000470886 VAMP4O75379 141 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 CDR1P51861 262 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 TTC39AQ5SRH9 613 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 LRRFIP2Q9Y608 721 aaKnown RBP12.38□□□□□ -0.43
RRP1B-202ENST00000470886 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
RRP1B-202ENST00000470886 PDE1AP54750 535 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
RRP1B-202ENST00000470886 WASF1Q92558 559 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 ZKSCAN5Q9Y2L8 839 aa12.38□□□□□ -0.43
RRP1B-202ENST00000470886 ERLIN1O75477 346 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 ATF3P18847 181 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 STK3Q13188 491 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 CEP89Q96ST8 783 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
RRP1B-202ENST00000470886 DBF4Q9UBU7 674 aaPredicted RBP12.37□□□□□ -0.43
RRP1B-202ENST00000470886 GSDMDP57764 484 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
RRP1B-202ENST00000470886 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
RRP1B-202ENST00000470886 TXLNAP40222 546 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 CDK12Q9NYV4 1490 aaPredicted RBP12.36□□□□□ -0.43
RRP1B-202ENST00000470886 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 SEC24BO95487 1268 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
RRP1B-202ENST00000470886 PTPN14Q15678 1187 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 REREQ9P2R6 1566 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 KIF6Q6ZMV9 814 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 HOMEZQ8IX15 550 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 PPLO60437 1756 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 OFD1O75665 1012 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 TERF1P54274 439 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 ESCO1Q5FWF5 840 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 KIF18AQ8NI77 898 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
RRP1B-202ENST00000470886 EIF3JO75822 258 aaKnown RBP12.35□□□□□ -0.43
RRP1B-202ENST00000470886 VPS37DQ86XT2 251 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 NACAP1Q9BZK3 213 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms