RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
LMCD1-207ENST00000470776 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
LMCD1-207ENST00000470776 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
LMCD1-207ENST00000470776 FLIIQ13045 1269 aa11.32□□□□□ -0.6
LMCD1-207ENST00000470776 PDIA6Q15084 440 aa11.32□□□□□ -0.6
LMCD1-207ENST00000470776 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
LMCD1-207ENST00000470776 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
LMCD1-207ENST00000470776 CLUAP1Q96AJ1 413 aa11.32□□□□□ -0.6
LMCD1-207ENST00000470776 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
LMCD1-207ENST00000470776 LRP10Q7Z4F1 713 aa11.31□□□□□ -0.6
LMCD1-207ENST00000470776 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
LMCD1-207ENST00000470776 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
LMCD1-207ENST00000470776 CHPF2Q9P2E5 772 aa11.31□□□□□ -0.6
LMCD1-207ENST00000470776 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
LMCD1-207ENST00000470776 DDX19BQ9UMR2 479 aa11.31□□□□□ -0.6
LMCD1-207ENST00000470776 UBR2Q8IWV8 1755 aa11.31□□□□□ -0.6
LMCD1-207ENST00000470776 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
LMCD1-207ENST00000470776 KCNA4P22459 653 aa11.3□□□□□ -0.6
LMCD1-207ENST00000470776 SEPT12Q8IYM1 358 aa11.3□□□□□ -0.6
LMCD1-207ENST00000470776 NECTIN2Q92692 538 aa11.3□□□□□ -0.6
LMCD1-207ENST00000470776 CHMP4BQ9H444 224 aaKnown RBP11.3□□□□□ -0.6
LMCD1-207ENST00000470776 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
LMCD1-207ENST00000470776 B4GALNT3Q6L9W6 998 aa11.29□□□□□ -0.6
LMCD1-207ENST00000470776 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
LMCD1-207ENST00000470776 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-207ENST00000470776 CCT4P50991 539 aaKnown RBP11.28□□□□□ -0.6
LMCD1-207ENST00000470776 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
LMCD1-207ENST00000470776 SMARCC1Q92922 1105 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-207ENST00000470776 CCDC136Q96JN2 1154 aa11.28□□□□□ -0.6
LMCD1-207ENST00000470776 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
LMCD1-207ENST00000470776 RBM19Q9Y4C8 960 aaKnown RBP11.28□□□□□ -0.6
LMCD1-207ENST00000470776 PXDNLA1KZ92 1463 aa11.27□□□□□ -0.6
LMCD1-207ENST00000470776 PTCD1O75127 700 aaKnown RBP11.27□□□□□ -0.61
LMCD1-207ENST00000470776 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
LMCD1-207ENST00000470776 ITPRIPQ8IWB1 547 aa11.27□□□□□ -0.61
LMCD1-207ENST00000470776 ACSBG1Q96GR2 724 aa11.27□□□□□ -0.61
LMCD1-207ENST00000470776 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
LMCD1-207ENST00000470776 ITGB4P16144 1822 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 F6X3S4 739 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 KCNQ2O43526 872 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 ANXA1P04083 346 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 NBPF14Q5TI25 921 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
LMCD1-207ENST00000470776 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 DNAJC10Q8IXB1 793 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 SYTL4Q96C24 671 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-207ENST00000470776 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 C5P01031 1676 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 ADCY9O60503 1353 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 DOT1LQ8TEK3 1739 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
LMCD1-207ENST00000470776 A0A0G2JS52 829 aa11.25□□□□□ -0.61
LMCD1-207ENST00000470776 STARD3NLO95772 234 aa11.25□□□□□ -0.61
LMCD1-207ENST00000470776 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
LMCD1-207ENST00000470776 CYP19A1P11511 503 aaPredicted RBP11.25□□□□□ -0.61
LMCD1-207ENST00000470776 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
LMCD1-207ENST00000470776 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
LMCD1-207ENST00000470776 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
LMCD1-207ENST00000470776 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
LMCD1-207ENST00000470776 LAMB4A4D0S4 1761 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 A1BGP04217 495 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 SIK1P57059 783 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 BEND3Q5T5X7 828 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 COPS6Q7L5N1 327 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 KRT27Q7Z3Y8 459 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 XAGE3Q8WTP9 111 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
LMCD1-207ENST00000470776 PALLDQ8WX93 1383 aa11.24□□□□□ -0.61
LMCD1-207ENST00000470776 ALDH1L1O75891 902 aa11.23□□□□□ -0.61
LMCD1-207ENST00000470776 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
LMCD1-207ENST00000470776 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
LMCD1-207ENST00000470776 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
LMCD1-207ENST00000470776 MYL6BP14649 208 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 ZNF831Q5JPB2 1677 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
LMCD1-207ENST00000470776 LINS1Q8NG48 757 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 METTL22Q9BUU2 404 aaPredicted RBP11.22□□□□□ -0.61
LMCD1-207ENST00000470776 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
LMCD1-207ENST00000470776 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.61
LMCD1-207ENST00000470776 IGHDP01880 384 aa11.21□□□□□ -0.61
LMCD1-207ENST00000470776 GNAI3P08754 354 aa11.21□□□□□ -0.61
LMCD1-207ENST00000470776 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.61
LMCD1-207ENST00000470776 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
LMCD1-207ENST00000470776 MEIS3Q99687 375 aa11.21□□□□□ -0.61
LMCD1-207ENST00000470776 USP44Q9H0E7 712 aa11.21□□□□□ -0.61
LMCD1-207ENST00000470776 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
LMCD1-207ENST00000470776 UTYO14607 1347 aa11.2□□□□□ -0.62
LMCD1-207ENST00000470776 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
LMCD1-207ENST00000470776 EIF5P55010 431 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms