RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
ABCA4-204ENST00000470771 DPEP1P16444 411 aa18.21■□□□□ 0.51
ABCA4-204ENST00000470771 C1QTNF8P60827 252 aa18.21■□□□□ 0.51
ABCA4-204ENST00000470771 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
ABCA4-204ENST00000470771 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
ABCA4-204ENST00000470771 C10orf71Q711Q0 1435 aa18.21■□□□□ 0.51
ABCA4-204ENST00000470771 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
ABCA4-204ENST00000470771 GPBP1L1Q9HC44 474 aaPredicted RBP18.2■□□□□ 0.5
ABCA4-204ENST00000470771 COL15A1P39059 1388 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 KCPQ6ZWJ8 1503 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 ADAMTS7Q9UKP4 1686 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 POLRMTO00411 1230 aaKnown RBP18.19■□□□□ 0.5
ABCA4-204ENST00000470771 TJP1Q07157 1748 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 DDR1Q08345 913 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
ABCA4-204ENST00000470771 PXDNLA1KZ92 1463 aa18.19■□□□□ 0.5
ABCA4-204ENST00000470771 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
ABCA4-204ENST00000470771 EIF5P55010 431 aaKnown RBP18.18■□□□□ 0.5
ABCA4-204ENST00000470771 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
ABCA4-204ENST00000470771 NFIXQ14938 502 aa18.17■□□□□ 0.5
ABCA4-204ENST00000470771 MCM10Q7L590 875 aa18.17■□□□□ 0.5
ABCA4-204ENST00000470771 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
ABCA4-204ENST00000470771 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
ABCA4-204ENST00000470771 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
ABCA4-204ENST00000470771 SERPINB2P05120 415 aa18.15■□□□□ 0.5
ABCA4-204ENST00000470771 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
ABCA4-204ENST00000470771 KCNA3P22001 575 aa18.15■□□□□ 0.5
ABCA4-204ENST00000470771 RALBP1Q15311 655 aa18.15■□□□□ 0.5
ABCA4-204ENST00000470771 KIF13BQ9NQT8 1826 aa18.14■□□□□ 0.5
ABCA4-204ENST00000470771 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
ABCA4-204ENST00000470771 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
ABCA4-204ENST00000470771 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
ABCA4-204ENST00000470771 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
ABCA4-204ENST00000470771 VIRMAQ69YN4 1812 aaKnown RBP18.13■□□□□ 0.49
ABCA4-204ENST00000470771 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 NPHP1O15259 732 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 KCNQ3O43525 872 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 A1BGP04217 495 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 CHRNA5P30532 468 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
ABCA4-204ENST00000470771 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
ABCA4-204ENST00000470771 H0YIN7 160 aa18.11■□□□□ 0.49
ABCA4-204ENST00000470771 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
ABCA4-204ENST00000470771 SETDB2Q96T68 719 aa18.11■□□□□ 0.49
ABCA4-204ENST00000470771 ADCY9O60503 1353 aa18.11■□□□□ 0.49
ABCA4-204ENST00000470771 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
ABCA4-204ENST00000470771 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
ABCA4-204ENST00000470771 PDE6BP35913 854 aa18.09■□□□□ 0.49
ABCA4-204ENST00000470771 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
ABCA4-204ENST00000470771 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
ABCA4-204ENST00000470771 TBC1D9BQ66K14 1250 aa18.09■□□□□ 0.49
ABCA4-204ENST00000470771 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
ABCA4-204ENST00000470771 TTLL6Q8N841 843 aa18.09■□□□□ 0.49
ABCA4-204ENST00000470771 ZNF652Q9Y2D9 606 aa18.09■□□□□ 0.49
ABCA4-204ENST00000470771 CLEC4GQ6UXB4 293 aa18.08■□□□□ 0.48
ABCA4-204ENST00000470771 C2CD5Q86YS7 1000 aa18.08■□□□□ 0.48
ABCA4-204ENST00000470771 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.48
ABCA4-204ENST00000470771 BRIP1Q9BX63 1249 aa18.08■□□□□ 0.48
ABCA4-204ENST00000470771 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
ABCA4-204ENST00000470771 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
ABCA4-204ENST00000470771 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
ABCA4-204ENST00000470771 CAMTA2O94983 1202 aa18.06■□□□□ 0.48
ABCA4-204ENST00000470771 MIS18AQ9NYP9 233 aa18.06■□□□□ 0.48
ABCA4-204ENST00000470771 ST5P78524 1137 aa18.05■□□□□ 0.48
ABCA4-204ENST00000470771 CNBD1Q8NA66 436 aa18.05■□□□□ 0.48
ABCA4-204ENST00000470771 RGL2O15211 777 aa18.04■□□□□ 0.48
ABCA4-204ENST00000470771 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
ABCA4-204ENST00000470771 PRAMEF22A3QJZ6 481 aa18.03■□□□□ 0.48
ABCA4-204ENST00000470771 LMOD3Q0VAK6 560 aa18.03■□□□□ 0.48
ABCA4-204ENST00000470771 ZNF622Q969S3 477 aaKnown RBP eCLIP18.03■□□□□ 0.48
ABCA4-204ENST00000470771 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
ABCA4-204ENST00000470771 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
ABCA4-204ENST00000470771 MYBBP1AQ9BQG0 1328 aaKnown RBP18.02■□□□□ 0.48
ABCA4-204ENST00000470771 PIP4K2AP48426 406 aaPredicted RBP18.02■□□□□ 0.48
ABCA4-204ENST00000470771 PRR5LQ6MZQ0 368 aa18.02■□□□□ 0.48
ABCA4-204ENST00000470771 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
ABCA4-204ENST00000470771 NBPF5PQ86XG9 351 aaPredicted RBP18.02■□□□□ 0.48
ABCA4-204ENST00000470771 LMNB1P20700 586 aa18.01■□□□□ 0.47
ABCA4-204ENST00000470771 RIPK4P57078 832 aa18.01■□□□□ 0.47
ABCA4-204ENST00000470771 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
ABCA4-204ENST00000470771 NBPF26B4DH59 902 aa18■□□□□ 0.47
ABCA4-204ENST00000470771 EIF4A1P60842 406 aaKnown RBP18■□□□□ 0.47
ABCA4-204ENST00000470771 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
ABCA4-204ENST00000470771 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
ABCA4-204ENST00000470771 NBPF15Q8N660 670 aa18■□□□□ 0.47
ABCA4-204ENST00000470771 CNKSR1Q969H4 720 aa18■□□□□ 0.47
ABCA4-204ENST00000470771 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
ABCA4-204ENST00000470771 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
ABCA4-204ENST00000470771 KIF3CO14782 793 aa17.99■□□□□ 0.47
ABCA4-204ENST00000470771 TOMM70O94826 608 aa17.99■□□□□ 0.47
ABCA4-204ENST00000470771 GTF2E1P29083 439 aaPredicted RBP17.99■□□□□ 0.47
ABCA4-204ENST00000470771 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
ABCA4-204ENST00000470771 NIP7Q9Y221 180 aaKnown RBP eCLIP17.99■□□□□ 0.47
ABCA4-204ENST00000470771 ARFGEF1Q9Y6D6 1849 aa17.99■□□□□ 0.47
ABCA4-204ENST00000470771 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms