RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 DDX21Q9NR30 783 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDLBP-233ENST00000470710 CHPF2Q9P2E5 772 aa11.09□□□□□ -0.63
HDLBP-233ENST00000470710 RGS17Q9UGC6 210 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-233ENST00000470710 RGS12O14924 1447 aa11.09□□□□□ -0.63
HDLBP-233ENST00000470710 ABCC4O15439 1325 aa11.09□□□□□ -0.63
HDLBP-233ENST00000470710 AAMPQ13685 434 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 PDIA6Q15084 440 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 HYPKQ9NX55 129 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 PPP4R2Q9NY27 417 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 USP16Q9Y5T5 823 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
HDLBP-233ENST00000470710 KCNQ2O43526 872 aa11.07□□□□□ -0.64
HDLBP-233ENST00000470710 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
HDLBP-233ENST00000470710 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
HDLBP-233ENST00000470710 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
HDLBP-233ENST00000470710 G2E3Q7L622 706 aa11.07□□□□□ -0.64
HDLBP-233ENST00000470710 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
HDLBP-233ENST00000470710 ITGB4P16144 1822 aa11.07□□□□□ -0.64
HDLBP-233ENST00000470710 PALLDQ8WX93 1383 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 STARD3NLO95772 234 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 PROSER3Q2NL68 480 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
HDLBP-233ENST00000470710 POTEAQ6S8J7 498 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 TMEM57Q8N5G2 664 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
HDLBP-233ENST00000470710 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
HDLBP-233ENST00000470710 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
HDLBP-233ENST00000470710 SIK1P57059 783 aa11.05□□□□□ -0.64
HDLBP-233ENST00000470710 FKBP5Q13451 457 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-233ENST00000470710 ITPRIPQ8IWB1 547 aa11.05□□□□□ -0.64
HDLBP-233ENST00000470710 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
HDLBP-233ENST00000470710 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-233ENST00000470710 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
HDLBP-233ENST00000470710 DDX19BQ9UMR2 479 aa11.05□□□□□ -0.64
HDLBP-233ENST00000470710 C5P01031 1676 aa11.04□□□□□ -0.64
HDLBP-233ENST00000470710 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
HDLBP-233ENST00000470710 ANXA1P04083 346 aa11.04□□□□□ -0.64
HDLBP-233ENST00000470710 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-233ENST00000470710 CCT4P50991 539 aaKnown RBP11.04□□□□□ -0.64
HDLBP-233ENST00000470710 FAM182BQ5T319 152 aa11.04□□□□□ -0.64
HDLBP-233ENST00000470710 CHMP4BQ9H444 224 aaKnown RBP11.04□□□□□ -0.64
HDLBP-233ENST00000470710 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
HDLBP-233ENST00000470710 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
HDLBP-233ENST00000470710 LAMB4A4D0S4 1761 aa11.03□□□□□ -0.64
HDLBP-233ENST00000470710 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
HDLBP-233ENST00000470710 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
HDLBP-233ENST00000470710 A1BGP04217 495 aa11.03□□□□□ -0.64
HDLBP-233ENST00000470710 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
HDLBP-233ENST00000470710 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
HDLBP-233ENST00000470710 PTF1AQ7RTS3 328 aa11.03□□□□□ -0.64
HDLBP-233ENST00000470710 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
HDLBP-233ENST00000470710 F6X3S4 739 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 MYL6BP14649 208 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 KSR2Q6VAB6 950 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 XAGE3Q8WTP9 111 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 DNAAF4Q8WXU2 420 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 ZBTB40Q9NUA8 1239 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 ADCY9O60503 1353 aa11.02□□□□□ -0.65
HDLBP-233ENST00000470710 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-233ENST00000470710 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
HDLBP-233ENST00000470710 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
HDLBP-233ENST00000470710 PI4KAP2A4QPH2 592 aa11.01□□□□□ -0.65
HDLBP-233ENST00000470710 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-233ENST00000470710 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
HDLBP-233ENST00000470710 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
HDLBP-233ENST00000470710 PI4KAP1Q8N8J0 262 aa11.01□□□□□ -0.65
HDLBP-233ENST00000470710 IBTKQ9P2D0 1353 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-233ENST00000470710 ITPK1Q13572 414 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 BEND3Q5T5X7 828 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 SLC4A10Q6U841 1118 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
HDLBP-233ENST00000470710 PLBD2Q8NHP8 589 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 MAP3K2Q9Y2U5 619 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 ZNF831Q5JPB2 1677 aa11□□□□□ -0.65
HDLBP-233ENST00000470710 TJP1Q07157 1748 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 IL6STP40189 918 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-233ENST00000470710 CRKLP46109 303 aaKnown RBP10.99□□□□□ -0.65
HDLBP-233ENST00000470710 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
HDLBP-233ENST00000470710 AIMP1Q12904 312 aaKnown RBP10.99□□□□□ -0.65
HDLBP-233ENST00000470710 INTS5Q6P9B9 1019 aaKnown RBP10.99□□□□□ -0.65
HDLBP-233ENST00000470710 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 CCDC87Q9NVE4 849 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 ZBTB1Q9Y2K1 713 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 BRWD3Q6RI45 1802 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
HDLBP-233ENST00000470710 BTAF1O14981 1849 aa10.98□□□□□ -0.65
HDLBP-233ENST00000470710 TRIM37O94972 964 aa10.98□□□□□ -0.65
HDLBP-233ENST00000470710 HMGB2P26583 209 aaKnown RBP10.98□□□□□ -0.65
HDLBP-233ENST00000470710 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
HDLBP-233ENST00000470710 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
HDLBP-233ENST00000470710 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
HDLBP-233ENST00000470710 LINC00116Q8NCU8 138 aa10.98□□□□□ -0.65
HDLBP-233ENST00000470710 LINS1Q8NG48 757 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms