RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 GYS1P13807 737 aa18.66■□□□□ 0.58
TOP3B-215ENST00000470338 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
TOP3B-215ENST00000470338 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
TOP3B-215ENST00000470338 THUMPD2Q9BTF0 503 aaKnown RBP18.65■□□□□ 0.58
TOP3B-215ENST00000470338 MIS18AQ9NYP9 233 aa18.65■□□□□ 0.58
TOP3B-215ENST00000470338 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
TOP3B-215ENST00000470338 ANP32CO43423 234 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
TOP3B-215ENST00000470338 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
TOP3B-215ENST00000470338 EIF5P55010 431 aaKnown RBP18.63■□□□□ 0.57
TOP3B-215ENST00000470338 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 KLHL34Q8N239 644 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 SRP68Q9UHB9 627 aaKnown RBP18.63■□□□□ 0.57
TOP3B-215ENST00000470338 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 COL15A1P39059 1388 aa18.63■□□□□ 0.57
TOP3B-215ENST00000470338 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
TOP3B-215ENST00000470338 MMP10P09238 476 aa18.62■□□□□ 0.57
TOP3B-215ENST00000470338 NARFQ9UHQ1 456 aa18.62■□□□□ 0.57
TOP3B-215ENST00000470338 KIF13BQ9NQT8 1826 aa18.62■□□□□ 0.57
TOP3B-215ENST00000470338 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
TOP3B-215ENST00000470338 NLGN2Q8NFZ4 835 aa18.61■□□□□ 0.57
TOP3B-215ENST00000470338 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
TOP3B-215ENST00000470338 ZPR1O75312 459 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 A1BGP04217 495 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 IL6STP40189 918 aaPredicted RBP18.6■□□□□ 0.57
TOP3B-215ENST00000470338 FKBP8Q14318 412 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 BABAM1Q9NWV8 329 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 TRIM35Q9UPQ4 493 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
TOP3B-215ENST00000470338 EIF4A1P60842 406 aaKnown RBP18.59■□□□□ 0.57
TOP3B-215ENST00000470338 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
TOP3B-215ENST00000470338 A0A087WZG4 1122 aa18.58■□□□□ 0.56
TOP3B-215ENST00000470338 TM4SF1P30408 202 aa18.58■□□□□ 0.56
TOP3B-215ENST00000470338 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
TOP3B-215ENST00000470338 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
TOP3B-215ENST00000470338 PARP3Q9Y6F1 533 aa18.57■□□□□ 0.56
TOP3B-215ENST00000470338 AFDNP55196 1824 aaKnown RBP18.56■□□□□ 0.56
TOP3B-215ENST00000470338 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
TOP3B-215ENST00000470338 GOLGB1Q14789 3259 aaKnown RBP18.56■□□□□ 0.56
TOP3B-215ENST00000470338 UTRNP46939 3433 aa18.55■□□□□ 0.56
TOP3B-215ENST00000470338 CHD4Q14839 1912 aa18.55■□□□□ 0.56
TOP3B-215ENST00000470338 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
TOP3B-215ENST00000470338 APAF1O14727 1248 aa18.55■□□□□ 0.56
TOP3B-215ENST00000470338 DDR1Q08345 913 aa18.55■□□□□ 0.56
TOP3B-215ENST00000470338 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 NBPF26B4DH59 902 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 POLRMTO00411 1230 aaKnown RBP18.54■□□□□ 0.56
TOP3B-215ENST00000470338 CHL1O00533 1208 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 NBPF10Q6P3W6 841 aaKnown RBP18.54■□□□□ 0.56
TOP3B-215ENST00000470338 NBPF15Q8N660 670 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 BCORQ6W2J9 1755 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
TOP3B-215ENST00000470338 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-215ENST00000470338 NFIXQ14938 502 aa18.53■□□□□ 0.56
TOP3B-215ENST00000470338 GPR162Q16538 588 aa18.53■□□□□ 0.56
TOP3B-215ENST00000470338 NRXN2Q9P2S2 1712 aa18.53■□□□□ 0.56
TOP3B-215ENST00000470338 ZNF330Q9Y3S2 320 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-215ENST00000470338 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-215ENST00000470338 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.56
TOP3B-215ENST00000470338 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
TOP3B-215ENST00000470338 TGFB2P61812 414 aa18.51■□□□□ 0.55
TOP3B-215ENST00000470338 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
TOP3B-215ENST00000470338 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
TOP3B-215ENST00000470338 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.551e-6■■□□□ 11.7
TOP3B-215ENST00000470338 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
TOP3B-215ENST00000470338 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
TOP3B-215ENST00000470338 ZNF853P0CG23 659 aa18.48■□□□□ 0.55
TOP3B-215ENST00000470338 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
TOP3B-215ENST00000470338 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
TOP3B-215ENST00000470338 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
TOP3B-215ENST00000470338 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
TOP3B-215ENST00000470338 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
TOP3B-215ENST00000470338 NUP98P52948 1817 aa18.47■□□□□ 0.55
TOP3B-215ENST00000470338 RGL2O15211 777 aa18.47■□□□□ 0.55
TOP3B-215ENST00000470338 SERPINB2P05120 415 aa18.47■□□□□ 0.55
TOP3B-215ENST00000470338 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
TOP3B-215ENST00000470338 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
TOP3B-215ENST00000470338 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
TOP3B-215ENST00000470338 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
TOP3B-215ENST00000470338 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
TOP3B-215ENST00000470338 DPEP1P16444 411 aa18.45■□□□□ 0.54
TOP3B-215ENST00000470338 KCNA3P22001 575 aa18.45■□□□□ 0.54
TOP3B-215ENST00000470338 CCDC27Q2M243 656 aa18.45■□□□□ 0.54
TOP3B-215ENST00000470338 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
TOP3B-215ENST00000470338 YY1P25490 414 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 GNAI1P63096 354 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 PDIA6Q15084 440 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 MBIPQ9NS73 344 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 ZNF652Q9Y2D9 606 aa18.44■□□□□ 0.54
TOP3B-215ENST00000470338 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
TOP3B-215ENST00000470338 CARMIL3Q8ND23 1372 aa18.43■□□□□ 0.54
TOP3B-215ENST00000470338 MYL6BP14649 208 aa18.43■□□□□ 0.54
TOP3B-215ENST00000470338 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms