RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
CCDC171-204ENST00000470191 SCN11AQ9UI33 1791 aa12.59□□□□□ -0.39
CCDC171-204ENST00000470191 ADAMTS7Q9UKP4 1686 aa12.59□□□□□ -0.39
CCDC171-204ENST00000470191 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
CCDC171-204ENST00000470191 MTHFSP49914 203 aa12.59□□□□□ -0.39
CCDC171-204ENST00000470191 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
CCDC171-204ENST00000470191 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.39
CCDC171-204ENST00000470191 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
CCDC171-204ENST00000470191 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
CCDC171-204ENST00000470191 PRELPP51888 382 aa12.58□□□□□ -0.4
CCDC171-204ENST00000470191 CACNA1SQ13698 1873 aa12.58□□□□□ -0.4
CCDC171-204ENST00000470191 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
CCDC171-204ENST00000470191 POLRMTO00411 1230 aaKnown RBP12.57□□□□□ -0.4
CCDC171-204ENST00000470191 ZPR1O75312 459 aa12.57□□□□□ -0.4
CCDC171-204ENST00000470191 USPL1Q5W0Q7 1092 aa12.57□□□□□ -0.4
CCDC171-204ENST00000470191 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
CCDC171-204ENST00000470191 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
CCDC171-204ENST00000470191 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
CCDC171-204ENST00000470191 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
CCDC171-204ENST00000470191 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
CCDC171-204ENST00000470191 TM4SF1P30408 202 aa12.55□□□□□ -0.4
CCDC171-204ENST00000470191 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
CCDC171-204ENST00000470191 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
CCDC171-204ENST00000470191 GLTPD2A6NH11 291 aa12.54□□□□□ -0.4
CCDC171-204ENST00000470191 LMNB1P20700 586 aa12.54□□□□□ -0.4
CCDC171-204ENST00000470191 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
CCDC171-204ENST00000470191 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
CCDC171-204ENST00000470191 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
CCDC171-204ENST00000470191 NFIXQ14938 502 aa12.53□□□□□ -0.4
CCDC171-204ENST00000470191 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
CCDC171-204ENST00000470191 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
CCDC171-204ENST00000470191 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
CCDC171-204ENST00000470191 SERPINB2P05120 415 aa12.52□□□□□ -0.41
CCDC171-204ENST00000470191 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
CCDC171-204ENST00000470191 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
CCDC171-204ENST00000470191 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
CCDC171-204ENST00000470191 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
CCDC171-204ENST00000470191 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
CCDC171-204ENST00000470191 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
CCDC171-204ENST00000470191 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-204ENST00000470191 COL15A1P39059 1388 aa12.51□□□□□ -0.41
CCDC171-204ENST00000470191 CARMIL3Q8ND23 1372 aa12.51□□□□□ -0.41
CCDC171-204ENST00000470191 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-204ENST00000470191 PCNTO95613 3336 aa12.5□□□□□ -0.41
CCDC171-204ENST00000470191 H0YIN7 160 aa12.5□□□□□ -0.41
CCDC171-204ENST00000470191 NFKBIEO00221 500 aa12.5□□□□□ -0.41
CCDC171-204ENST00000470191 ZNF622Q969S3 477 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC171-204ENST00000470191 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
CCDC171-204ENST00000470191 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
CCDC171-204ENST00000470191 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
CCDC171-204ENST00000470191 POTECB2RU33 542 aa12.49□□□□□ -0.41
CCDC171-204ENST00000470191 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-204ENST00000470191 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
CCDC171-204ENST00000470191 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
CCDC171-204ENST00000470191 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
CCDC171-204ENST00000470191 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
CCDC171-204ENST00000470191 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
CCDC171-204ENST00000470191 C21orf2O43822 256 aa12.48□□□□□ -0.41
CCDC171-204ENST00000470191 PANK3Q9H999 370 aa12.48□□□□□ -0.41
CCDC171-204ENST00000470191 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
CCDC171-204ENST00000470191 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
CCDC171-204ENST00000470191 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
CCDC171-204ENST00000470191 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
CCDC171-204ENST00000470191 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
CCDC171-204ENST00000470191 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
CCDC171-204ENST00000470191 RNMTO43148 476 aaKnown RBP12.46□□□□□ -0.41
CCDC171-204ENST00000470191 HMOX1P09601 288 aa12.46□□□□□ -0.41
CCDC171-204ENST00000470191 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
CCDC171-204ENST00000470191 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.42
CCDC171-204ENST00000470191 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
CCDC171-204ENST00000470191 FOXN1O15353 648 aa12.45□□□□□ -0.42
CCDC171-204ENST00000470191 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
CCDC171-204ENST00000470191 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
CCDC171-204ENST00000470191 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
CCDC171-204ENST00000470191 NPHP1O15259 732 aa12.44□□□□□ -0.42
CCDC171-204ENST00000470191 IL13P35225 146 aa12.44□□□□□ -0.42
CCDC171-204ENST00000470191 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
CCDC171-204ENST00000470191 MRC1P22897 1456 aa12.43□□□□□ -0.42
CCDC171-204ENST00000470191 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
CCDC171-204ENST00000470191 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
CCDC171-204ENST00000470191 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
CCDC171-204ENST00000470191 PDE6BP35913 854 aa12.42□□□□□ -0.42
CCDC171-204ENST00000470191 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
CCDC171-204ENST00000470191 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
CCDC171-204ENST00000470191 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
CCDC171-204ENST00000470191 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-204ENST00000470191 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
CCDC171-204ENST00000470191 AIDAQ96BJ3 306 aa12.41□□□□□ -0.42
CCDC171-204ENST00000470191 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
CCDC171-204ENST00000470191 SCN4AP35499 1836 aa12.41□□□□□ -0.42
CCDC171-204ENST00000470191 A0A087WZG4 1122 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 STARD3NLO95772 234 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 BCORQ6W2J9 1755 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
CCDC171-204ENST00000470191 SIPA1L3O60292 1781 aaPredicted RBP12.39□□□□□ -0.43
CCDC171-204ENST00000470191 VEGFBP49765 207 aa12.39□□□□□ -0.43
CCDC171-204ENST00000470191 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms