RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 PIM2Q9P1W9 311 aa18.04■□□□□ 0.48
LINC00173-201ENST00000470091 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
LINC00173-201ENST00000470091 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
LINC00173-201ENST00000470091 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
LINC00173-201ENST00000470091 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
LINC00173-201ENST00000470091 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.48
LINC00173-201ENST00000470091 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.48
LINC00173-201ENST00000470091 DALRD3Q5D0E6 543 aaKnown RBP18.02■□□□□ 0.48
LINC00173-201ENST00000470091 KIF3CO14782 793 aa18.01■□□□□ 0.47
LINC00173-201ENST00000470091 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
LINC00173-201ENST00000470091 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
LINC00173-201ENST00000470091 TJP1Q07157 1748 aa18.01■□□□□ 0.47
LINC00173-201ENST00000470091 TEFQ10587 303 aa18■□□□□ 0.47
LINC00173-201ENST00000470091 NFIXQ14938 502 aa18■□□□□ 0.47
LINC00173-201ENST00000470091 C9orf131Q5VYM1 1079 aa18■□□□□ 0.47
LINC00173-201ENST00000470091 IL17REQ8NFR9 667 aa18■□□□□ 0.47
LINC00173-201ENST00000470091 KIF13BQ9NQT8 1826 aa18■□□□□ 0.47
LINC00173-201ENST00000470091 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
LINC00173-201ENST00000470091 HSPA6P17066 643 aa17.99■□□□□ 0.47
LINC00173-201ENST00000470091 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
LINC00173-201ENST00000470091 STARD3NLO95772 234 aa17.98■□□□□ 0.47
LINC00173-201ENST00000470091 CENPBP07199 599 aaPredicted RBP17.98■□□□□ 0.47
LINC00173-201ENST00000470091 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
LINC00173-201ENST00000470091 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
LINC00173-201ENST00000470091 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
LINC00173-201ENST00000470091 COL15A1P39059 1388 aa17.97■□□□□ 0.47
LINC00173-201ENST00000470091 HNRNPUQ00839 825 aaKnown RBP eCLIP17.97■□□□□ 0.47
LINC00173-201ENST00000470091 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
LINC00173-201ENST00000470091 ZNF496Q96IT1 587 aaPredicted RBP17.97■□□□□ 0.47
LINC00173-201ENST00000470091 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
LINC00173-201ENST00000470091 BCL2L12Q9HB09 334 aa17.97■□□□□ 0.47
LINC00173-201ENST00000470091 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
LINC00173-201ENST00000470091 SERPINB2P05120 415 aa17.96■□□□□ 0.47
LINC00173-201ENST00000470091 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
LINC00173-201ENST00000470091 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
LINC00173-201ENST00000470091 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
LINC00173-201ENST00000470091 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
LINC00173-201ENST00000470091 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
LINC00173-201ENST00000470091 RNF181Q9P0P0 153 aa17.95■□□□□ 0.46
LINC00173-201ENST00000470091 MRC1P22897 1456 aa17.95■□□□□ 0.46
LINC00173-201ENST00000470091 KCNQ3O43525 872 aa17.94■□□□□ 0.46
LINC00173-201ENST00000470091 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
LINC00173-201ENST00000470091 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
LINC00173-201ENST00000470091 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
LINC00173-201ENST00000470091 A1BGP04217 495 aa17.93■□□□□ 0.46
LINC00173-201ENST00000470091 C2CD5Q86YS7 1000 aa17.93■□□□□ 0.46
LINC00173-201ENST00000470091 A0A087WZG4 1122 aa17.92■□□□□ 0.46
LINC00173-201ENST00000470091 TOMM70O94826 608 aa17.92■□□□□ 0.46
LINC00173-201ENST00000470091 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
LINC00173-201ENST00000470091 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC00173-201ENST00000470091 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
LINC00173-201ENST00000470091 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
LINC00173-201ENST00000470091 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
LINC00173-201ENST00000470091 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
LINC00173-201ENST00000470091 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
LINC00173-201ENST00000470091 ADAMTS7Q9UKP4 1686 aa17.91■□□□□ 0.46
LINC00173-201ENST00000470091 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
LINC00173-201ENST00000470091 RASSF7Q02833 373 aa17.91■□□□□ 0.46
LINC00173-201ENST00000470091 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
LINC00173-201ENST00000470091 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
LINC00173-201ENST00000470091 RSPH6AQ9H0K4 717 aa17.91■□□□□ 0.46
LINC00173-201ENST00000470091 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
LINC00173-201ENST00000470091 H0YIN7 160 aa17.9■□□□□ 0.46
LINC00173-201ENST00000470091 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
LINC00173-201ENST00000470091 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
LINC00173-201ENST00000470091 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
LINC00173-201ENST00000470091 BRCA1P38398 1863 aaKnown RBP17.89■□□□□ 0.45
LINC00173-201ENST00000470091 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
LINC00173-201ENST00000470091 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
LINC00173-201ENST00000470091 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
LINC00173-201ENST00000470091 MCM10Q7L590 875 aa17.88■□□□□ 0.45
LINC00173-201ENST00000470091 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
LINC00173-201ENST00000470091 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00173-201ENST00000470091 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
LINC00173-201ENST00000470091 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
LINC00173-201ENST00000470091 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
LINC00173-201ENST00000470091 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
LINC00173-201ENST00000470091 CARMIL3Q8ND23 1372 aa17.87■□□□□ 0.45
LINC00173-201ENST00000470091 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
LINC00173-201ENST00000470091 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
LINC00173-201ENST00000470091 NPHP1O15259 732 aa17.86■□□□□ 0.45
LINC00173-201ENST00000470091 APLP1P51693 650 aa17.86■□□□□ 0.45
LINC00173-201ENST00000470091 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
LINC00173-201ENST00000470091 ZBED9Q6R2W3 1325 aa17.85■□□□□ 0.45
LINC00173-201ENST00000470091 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
LINC00173-201ENST00000470091 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
LINC00173-201ENST00000470091 LMNB1P20700 586 aa17.84■□□□□ 0.45
LINC00173-201ENST00000470091 PRELPP51888 382 aa17.84■□□□□ 0.45
LINC00173-201ENST00000470091 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
LINC00173-201ENST00000470091 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
LINC00173-201ENST00000470091 RBM46Q8TBY0 533 aaKnown RBP17.84■□□□□ 0.45
LINC00173-201ENST00000470091 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
LINC00173-201ENST00000470091 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
LINC00173-201ENST00000470091 C21orf2O43822 256 aa17.83■□□□□ 0.44
LINC00173-201ENST00000470091 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
LINC00173-201ENST00000470091 PDE6BP35913 854 aa17.83■□□□□ 0.44
LINC00173-201ENST00000470091 HTRA3P83110 453 aa17.83■□□□□ 0.44
LINC00173-201ENST00000470091 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.44
LINC00173-201ENST00000470091 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
LINC00173-201ENST00000470091 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms