RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 TEFQ10587 303 aa12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 CCDC184Q52MB2 194 aa12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 CCDC146Q8IYE0 955 aa12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-203ENST00000469923 CEMIPQ8WUJ3 1361 aa12.32□□□□□ -0.44
SHROOM3-203ENST00000469923 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
SHROOM3-203ENST00000469923 COL5A3P25940 1745 aaPredicted RBP12.32□□□□□ -0.44
SHROOM3-203ENST00000469923 NUDCQ9Y266 331 aa12.32□□□□□ -0.44
SHROOM3-203ENST00000469923 MRC1P22897 1456 aa12.32□□□□□ -0.44
SHROOM3-203ENST00000469923 ADRA2BP18089 450 aa12.31□□□□□ -0.44
SHROOM3-203ENST00000469923 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
SHROOM3-203ENST00000469923 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
SHROOM3-203ENST00000469923 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
SHROOM3-203ENST00000469923 PARP3Q9Y6F1 533 aa12.31□□□□□ -0.44
SHROOM3-203ENST00000469923 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
SHROOM3-203ENST00000469923 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
SHROOM3-203ENST00000469923 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
SHROOM3-203ENST00000469923 PXDNLA1KZ92 1463 aa12.3□□□□□ -0.44
SHROOM3-203ENST00000469923 PRELPP51888 382 aa12.3□□□□□ -0.44
SHROOM3-203ENST00000469923 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
SHROOM3-203ENST00000469923 ZPR1O75312 459 aa12.29□□□□□ -0.44
SHROOM3-203ENST00000469923 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
SHROOM3-203ENST00000469923 VSIG10Q8N0Z9 540 aa12.29□□□□□ -0.44
SHROOM3-203ENST00000469923 NGEFQ8N5V2 710 aa12.29□□□□□ -0.44
SHROOM3-203ENST00000469923 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
SHROOM3-203ENST00000469923 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 CAMTA2O94983 1202 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 SERPINB2P05120 415 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 KRT24Q2M2I5 525 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 FMNL2Q96PY5 1086 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 COL15A1P39059 1388 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 CEP350Q5VT06 3117 aa12.28□□□□□ -0.44
SHROOM3-203ENST00000469923 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 STARD3NLO95772 234 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 HLFQ16534 295 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 ADAMTS8Q9UP79 889 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
SHROOM3-203ENST00000469923 C4AP0C0L4 1744 aa12.26□□□□□ -0.45
SHROOM3-203ENST00000469923 KIAA1551Q9HCM1 1747 aa12.26□□□□□ -0.45
SHROOM3-203ENST00000469923 ANXA1P04083 346 aa12.26□□□□□ -0.45
SHROOM3-203ENST00000469923 TGFB2P61812 414 aa12.26□□□□□ -0.45
SHROOM3-203ENST00000469923 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
SHROOM3-203ENST00000469923 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
SHROOM3-203ENST00000469923 FAM177BA6PVY3 158 aa12.25□□□□□ -0.45
SHROOM3-203ENST00000469923 RIPK4P57078 832 aa12.25□□□□□ -0.45
SHROOM3-203ENST00000469923 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
SHROOM3-203ENST00000469923 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
SHROOM3-203ENST00000469923 TMPOP42166 694 aaKnown RBP12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 RALBP1Q15311 655 aa12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 PROSER3Q2NL68 480 aa12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 TTLL7Q6ZT98 887 aa12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
SHROOM3-203ENST00000469923 ATP10DQ9P241 1426 aa12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 RASSF7Q02833 373 aa12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 CHD4Q14839 1912 aa12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
SHROOM3-203ENST00000469923 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-203ENST00000469923 MYL6BP14649 208 aa12.22□□□□□ -0.45
SHROOM3-203ENST00000469923 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-203ENST00000469923 C1QTNF8P60827 252 aa12.22□□□□□ -0.45
SHROOM3-203ENST00000469923 PIM2Q9P1W9 311 aa12.22□□□□□ -0.45
SHROOM3-203ENST00000469923 PDIA6Q15084 440 aa12.21□□□□□ -0.45
SHROOM3-203ENST00000469923 DALRD3Q5D0E6 543 aaKnown RBP12.21□□□□□ -0.45
SHROOM3-203ENST00000469923 C9orf131Q5VYM1 1079 aa12.21□□□□□ -0.45
SHROOM3-203ENST00000469923 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
SHROOM3-203ENST00000469923 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-203ENST00000469923 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-203ENST00000469923 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
SHROOM3-203ENST00000469923 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
SHROOM3-203ENST00000469923 LAS1LQ9Y4W2 734 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-203ENST00000469923 ADCY9O60503 1353 aa12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 A0A087WZG4 1122 aa12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 SYNE4Q8N205 404 aa12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 NMRK2Q9NPI5 230 aa12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
SHROOM3-203ENST00000469923 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
SHROOM3-203ENST00000469923 KIF3CO14782 793 aa12.18□□□□□ -0.46
SHROOM3-203ENST00000469923 GPTP24298 496 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms