RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
COMMD2-202ENST00000469896 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
COMMD2-202ENST00000469896 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
COMMD2-202ENST00000469896 BEGAINQ9BUH8 593 aa15.98■□□□□ 0.15
COMMD2-202ENST00000469896 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
COMMD2-202ENST00000469896 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
COMMD2-202ENST00000469896 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 ITGB4P16144 1822 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 RGPD2P0DJD1 1756 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 RPS6KA4O75676 772 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 SLC12A5Q9H2X9 1139 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 A0A1W2PP64 1363 aa15.96■□□□□ 0.15
COMMD2-202ENST00000469896 CNTNAP4Q9C0A0 1308 aa15.95■□□□□ 0.14
COMMD2-202ENST00000469896 LDHDQ86WU2 507 aa15.95■□□□□ 0.14
COMMD2-202ENST00000469896 TIAM2Q8IVF5 1701 aa15.94■□□□□ 0.14
COMMD2-202ENST00000469896 IQCA1LA6NCM1 817 aa15.94■□□□□ 0.14
COMMD2-202ENST00000469896 DDR1Q08345 913 aa15.94■□□□□ 0.14
COMMD2-202ENST00000469896 DEFB115Q30KQ5 88 aa15.94■□□□□ 0.14
COMMD2-202ENST00000469896 ERFEQ4G0M1 354 aa15.94■□□□□ 0.14
COMMD2-202ENST00000469896 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
COMMD2-202ENST00000469896 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
COMMD2-202ENST00000469896 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
COMMD2-202ENST00000469896 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
COMMD2-202ENST00000469896 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
COMMD2-202ENST00000469896 TTLL6Q8N841 843 aa15.93■□□□□ 0.14
COMMD2-202ENST00000469896 KDRP35968 1356 aa15.92■□□□□ 0.14
COMMD2-202ENST00000469896 FBLN1P23142 703 aa15.92■□□□□ 0.14
COMMD2-202ENST00000469896 CLCN6P51797 869 aa15.92■□□□□ 0.14
COMMD2-202ENST00000469896 FKBP8Q14318 412 aa15.92■□□□□ 0.14
COMMD2-202ENST00000469896 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
COMMD2-202ENST00000469896 WDR33Q9C0J8 1336 aaKnown RBP15.92■□□□□ 0.14
COMMD2-202ENST00000469896 NFKBIEO00221 500 aa15.91■□□□□ 0.14
COMMD2-202ENST00000469896 USP42Q9H9J4 1324 aaKnown RBP15.91■□□□□ 0.14
COMMD2-202ENST00000469896 TNRC18O15417 2968 aaPredicted RBP15.9■□□□□ 0.14
COMMD2-202ENST00000469896 INSRP06213 1382 aa15.89■□□□□ 0.13
COMMD2-202ENST00000469896 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
COMMD2-202ENST00000469896 ABT1Q9ULW3 272 aaKnown RBP15.89■□□□□ 0.13
COMMD2-202ENST00000469896 PRPF38BQ5VTL8 546 aaKnown RBP15.88■□□□□ 0.13
COMMD2-202ENST00000469896 SRP68Q9UHB9 627 aaKnown RBP15.88■□□□□ 0.13
COMMD2-202ENST00000469896 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
COMMD2-202ENST00000469896 DDNO94850 711 aaPredicted RBP15.87■□□□□ 0.13
COMMD2-202ENST00000469896 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
COMMD2-202ENST00000469896 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
COMMD2-202ENST00000469896 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
COMMD2-202ENST00000469896 MCOLN1Q9GZU1 580 aa15.87■□□□□ 0.13
COMMD2-202ENST00000469896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
COMMD2-202ENST00000469896 FLT4P35916 1363 aa15.87■□□□□ 0.13
COMMD2-202ENST00000469896 H0YIN7 160 aa15.86■□□□□ 0.13
COMMD2-202ENST00000469896 ECE1P42892 770 aa15.86■□□□□ 0.13
COMMD2-202ENST00000469896 SLC4A9Q96Q91 983 aa15.86■□□□□ 0.13
COMMD2-202ENST00000469896 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
COMMD2-202ENST00000469896 ZPR1O75312 459 aa15.85■□□□□ 0.13
COMMD2-202ENST00000469896 TM4SF1P30408 202 aa15.85■□□□□ 0.13
COMMD2-202ENST00000469896 EAPPQ56P03 285 aaPredicted RBP15.85■□□□□ 0.13
COMMD2-202ENST00000469896 PAXIP1Q6ZW49 1069 aaPredicted RBP15.85■□□□□ 0.13
COMMD2-202ENST00000469896 C2CD5Q86YS7 1000 aa15.85■□□□□ 0.13
COMMD2-202ENST00000469896 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
COMMD2-202ENST00000469896 ZNF831Q5JPB2 1677 aa15.84■□□□□ 0.13
COMMD2-202ENST00000469896 PHKG2P15735 406 aa15.84■□□□□ 0.13
COMMD2-202ENST00000469896 L3MBTL3Q96JM7 780 aaPredicted RBP15.84■□□□□ 0.13
COMMD2-202ENST00000469896 PUS7Q96PZ0 661 aaKnown RBP15.84■□□□□ 0.13
COMMD2-202ENST00000469896 TAOK3Q9H2K8 898 aa15.84■□□□□ 0.13
COMMD2-202ENST00000469896 CA12O43570 354 aa15.83■□□□□ 0.12
COMMD2-202ENST00000469896 CRKLP46109 303 aaKnown RBP15.83■□□□□ 0.12
COMMD2-202ENST00000469896 ERVV-2B6SEH9 535 aa15.82■□□□□ 0.12
COMMD2-202ENST00000469896 CAPNS2Q96L46 248 aa15.82■□□□□ 0.12
COMMD2-202ENST00000469896 GPR101Q96P66 508 aaPredicted RBP15.82■□□□□ 0.12
COMMD2-202ENST00000469896 COL5A3P25940 1745 aaPredicted RBP15.81■□□□□ 0.12
COMMD2-202ENST00000469896 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
COMMD2-202ENST00000469896 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
COMMD2-202ENST00000469896 L3MBTL2Q969R5 705 aa15.81■□□□□ 0.12
COMMD2-202ENST00000469896 LTBP3Q9NS15 1303 aa15.81■□□□□ 0.12
COMMD2-202ENST00000469896 C21orf2O43822 256 aa15.8■□□□□ 0.12
COMMD2-202ENST00000469896 GRM1Q13255 1194 aa15.8■□□□□ 0.12
COMMD2-202ENST00000469896 DGKZQ13574 1117 aa15.8■□□□□ 0.12
COMMD2-202ENST00000469896 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
COMMD2-202ENST00000469896 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
COMMD2-202ENST00000469896 HSP90AB1P08238 724 aaKnown RBP15.79■□□□□ 0.12
COMMD2-202ENST00000469896 USPL1Q5W0Q7 1092 aa15.79■□□□□ 0.12
COMMD2-202ENST00000469896 ZNF622Q969S3 477 aaKnown RBP eCLIP15.79■□□□□ 0.12
COMMD2-202ENST00000469896 PHF12Q96QT6 1004 aa15.79■□□□□ 0.12
COMMD2-202ENST00000469896 TSKSQ9UJT2 592 aa15.79■□□□□ 0.12
COMMD2-202ENST00000469896 CCDC88AQ3V6T2 1871 aa15.79■□□□□ 0.12
COMMD2-202ENST00000469896 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
COMMD2-202ENST00000469896 GALR2O43603 387 aaPredicted RBP15.78■□□□□ 0.12
COMMD2-202ENST00000469896 PTCD1O75127 700 aaKnown RBP15.78■□□□□ 0.12
COMMD2-202ENST00000469896 SERPINB2P05120 415 aa15.78■□□□□ 0.12
COMMD2-202ENST00000469896 EPHX2P34913 555 aa15.78■□□□□ 0.12
COMMD2-202ENST00000469896 MAP2K2P36507 400 aa15.78■□□□□ 0.12
COMMD2-202ENST00000469896 NFIXQ14938 502 aa15.78■□□□□ 0.12
COMMD2-202ENST00000469896 NCAPD2Q15021 1401 aa15.77■□□□□ 0.12
COMMD2-202ENST00000469896 DLEC1Q9Y238 1755 aa15.77■□□□□ 0.12
COMMD2-202ENST00000469896 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
COMMD2-202ENST00000469896 MAP1SQ66K74 1059 aaPredicted RBP15.77■□□□□ 0.12
COMMD2-202ENST00000469896 GCC1Q96CN9 775 aa15.77■□□□□ 0.12
COMMD2-202ENST00000469896 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
COMMD2-202ENST00000469896 SCN4AP35499 1836 aa15.77■□□□□ 0.11
COMMD2-202ENST00000469896 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
COMMD2-202ENST00000469896 CABP4P57796 275 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms