RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 ZPR1O75312 459 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 DPEP1P16444 411 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 TTC5Q8N0Z6 440 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 PCNTO95613 3336 aa15.45■□□□□ 0.06
FAM228B-203ENST00000469867 SENP3-EIF4A1A0A087X0R7 540 aa15.44■□□□□ 0.06
FAM228B-203ENST00000469867 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
FAM228B-203ENST00000469867 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
FAM228B-203ENST00000469867 CCER2I3L3R5 266 aa15.44■□□□□ 0.06
FAM228B-203ENST00000469867 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
FAM228B-203ENST00000469867 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
FAM228B-203ENST00000469867 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
FAM228B-203ENST00000469867 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
FAM228B-203ENST00000469867 ZNF496Q96IT1 587 aaPredicted RBP15.43■□□□□ 0.06
FAM228B-203ENST00000469867 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
FAM228B-203ENST00000469867 U2AF1L5P0DN76 240 aaPredicted RBP15.43■□□□□ 0.06
FAM228B-203ENST00000469867 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
FAM228B-203ENST00000469867 U2AF1Q01081 240 aaKnown RBP eCLIP15.43■□□□□ 0.06
FAM228B-203ENST00000469867 COL15A1P39059 1388 aa15.42■□□□□ 0.06
FAM228B-203ENST00000469867 ZNF790Q6PG37 636 aa15.42■□□□□ 0.06
FAM228B-203ENST00000469867 RSPH6AQ9H0K4 717 aa15.42■□□□□ 0.06
FAM228B-203ENST00000469867 KIAA1551Q9HCM1 1747 aa15.42■□□□□ 0.06
FAM228B-203ENST00000469867 FCHSD2O94868 740 aa15.42■□□□□ 0.06
FAM228B-203ENST00000469867 VSIG10Q8N0Z9 540 aa15.42■□□□□ 0.06
FAM228B-203ENST00000469867 KCNA3P22001 575 aa15.41■□□□□ 0.06
FAM228B-203ENST00000469867 ZNF330Q9Y3S2 320 aaPredicted RBP15.41■□□□□ 0.06
FAM228B-203ENST00000469867 ADCY9O60503 1353 aa15.41■□□□□ 0.06
FAM228B-203ENST00000469867 POLRMTO00411 1230 aaKnown RBP15.41■□□□□ 0.06
FAM228B-203ENST00000469867 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
FAM228B-203ENST00000469867 STARD3NLO95772 234 aa15.4■□□□□ 0.06
FAM228B-203ENST00000469867 TM4SF1P30408 202 aa15.4■□□□□ 0.06
FAM228B-203ENST00000469867 CHRNA5P30532 468 aa15.4■□□□□ 0.06
FAM228B-203ENST00000469867 ARHGAP27Q6ZUM4 889 aa15.4■□□□□ 0.06
FAM228B-203ENST00000469867 NFIXQ14938 502 aa15.4■□□□□ 0.06
FAM228B-203ENST00000469867 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
FAM228B-203ENST00000469867 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
FAM228B-203ENST00000469867 KCNQ3O43525 872 aa15.39■□□□□ 0.05
FAM228B-203ENST00000469867 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
FAM228B-203ENST00000469867 CEMIPQ8WUJ3 1361 aa15.39■□□□□ 0.05
FAM228B-203ENST00000469867 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
FAM228B-203ENST00000469867 MCM10Q7L590 875 aa15.38■□□□□ 0.05
FAM228B-203ENST00000469867 BCL2L12Q9HB09 334 aa15.38■□□□□ 0.05
FAM228B-203ENST00000469867 HEG1Q9ULI3 1381 aa15.38■□□□□ 0.05
FAM228B-203ENST00000469867 BTBD11A6QL63 1104 aa15.38■□□□□ 0.05
FAM228B-203ENST00000469867 BRCA1P38398 1863 aaKnown RBP15.37■□□□□ 0.05
FAM228B-203ENST00000469867 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
FAM228B-203ENST00000469867 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
FAM228B-203ENST00000469867 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
FAM228B-203ENST00000469867 A1BGP04217 495 aa15.36■□□□□ 0.05
FAM228B-203ENST00000469867 DALRD3Q5D0E6 543 aaKnown RBP15.36■□□□□ 0.05
FAM228B-203ENST00000469867 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
FAM228B-203ENST00000469867 PIP4K2AP48426 406 aaPredicted RBP15.36■□□□□ 0.05
FAM228B-203ENST00000469867 RTF1Q92541 710 aaKnown RBP15.36■□□□□ 0.05
FAM228B-203ENST00000469867 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
FAM228B-203ENST00000469867 SERPINB2P05120 415 aa15.35■□□□□ 0.05
FAM228B-203ENST00000469867 MRS2Q9HD23 443 aa15.35■□□□□ 0.05
FAM228B-203ENST00000469867 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
FAM228B-203ENST00000469867 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
FAM228B-203ENST00000469867 FAM9BQ8IZU0 186 aa15.34■□□□□ 0.05
FAM228B-203ENST00000469867 AFDNP55196 1824 aaKnown RBP15.34■□□□□ 0.05
FAM228B-203ENST00000469867 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
FAM228B-203ENST00000469867 USP16Q9Y5T5 823 aa15.33■□□□□ 0.04
FAM228B-203ENST00000469867 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
FAM228B-203ENST00000469867 CCDC24Q8N4L8 307 aa15.33■□□□□ 0.04
FAM228B-203ENST00000469867 CARMIL3Q8ND23 1372 aa15.32■□□□□ 0.04
FAM228B-203ENST00000469867 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
FAM228B-203ENST00000469867 IL6STP40189 918 aaPredicted RBP15.32■□□□□ 0.04
FAM228B-203ENST00000469867 IRX6P78412 446 aaPredicted RBP15.32■□□□□ 0.04
FAM228B-203ENST00000469867 MIS18AQ9NYP9 233 aa15.32■□□□□ 0.04
FAM228B-203ENST00000469867 A0A087WZG4 1122 aa15.31■□□□□ 0.04
FAM228B-203ENST00000469867 KIF3CO14782 793 aa15.31■□□□□ 0.04
FAM228B-203ENST00000469867 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
FAM228B-203ENST00000469867 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
FAM228B-203ENST00000469867 RNF181Q9P0P0 153 aa15.29■□□□□ 0.04
FAM228B-203ENST00000469867 NPHP1O15259 732 aa15.28■□□□□ 0.04
FAM228B-203ENST00000469867 NEFMP07197 916 aa15.28■□□□□ 0.04
FAM228B-203ENST00000469867 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
FAM228B-203ENST00000469867 DZIP3Q86Y13 1208 aaKnown RBP15.28■□□□□ 0.04
FAM228B-203ENST00000469867 C2CD5Q86YS7 1000 aa15.28■□□□□ 0.04
FAM228B-203ENST00000469867 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
FAM228B-203ENST00000469867 H0YIN7 160 aa15.28■□□□□ 0.04
FAM228B-203ENST00000469867 CAMTA2O94983 1202 aa15.28■□□□□ 0.04
FAM228B-203ENST00000469867 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
FAM228B-203ENST00000469867 RASSF7Q02833 373 aa15.27■□□□□ 0.04
FAM228B-203ENST00000469867 TTLL6Q8N841 843 aa15.27■□□□□ 0.04
FAM228B-203ENST00000469867 SETDB2Q96T68 719 aa15.27■□□□□ 0.04
FAM228B-203ENST00000469867 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
FAM228B-203ENST00000469867 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.03
FAM228B-203ENST00000469867 PRR5LQ6MZQ0 368 aa15.27■□□□□ 0.03
FAM228B-203ENST00000469867 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
FAM228B-203ENST00000469867 SCN7AQ01118 1682 aa15.26■□□□□ 0.03
FAM228B-203ENST00000469867 ZNF622Q969S3 477 aaKnown RBP eCLIP15.26■□□□□ 0.03
FAM228B-203ENST00000469867 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
FAM228B-203ENST00000469867 NBPF26B4DH59 902 aa15.25■□□□□ 0.03
FAM228B-203ENST00000469867 HSPA6P17066 643 aa15.25■□□□□ 0.03
FAM228B-203ENST00000469867 NBPF10Q6P3W6 841 aaKnown RBP15.25■□□□□ 0.03
FAM228B-203ENST00000469867 NBPF15Q8N660 670 aa15.25■□□□□ 0.03
FAM228B-203ENST00000469867 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms