RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
THBS3-206ENST00000469769 COL5A3P25940 1745 aaPredicted RBP13.32□□□□□ -0.28
THBS3-206ENST00000469769 KIF16BQ96L93 1317 aa13.32□□□□□ -0.28
THBS3-206ENST00000469769 RGPD3A6NKT7 1758 aaPredicted RBP13.31□□□□□ -0.28
THBS3-206ENST00000469769 RGPD4Q7Z3J3 1758 aa13.31□□□□□ -0.28
THBS3-206ENST00000469769 PLSCR1O15162 318 aa13.31□□□□□ -0.28
THBS3-206ENST00000469769 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
THBS3-206ENST00000469769 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
THBS3-206ENST00000469769 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
THBS3-206ENST00000469769 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
THBS3-206ENST00000469769 TRIM37O94972 964 aa13.3□□□□□ -0.28
THBS3-206ENST00000469769 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
THBS3-206ENST00000469769 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
THBS3-206ENST00000469769 PDE3AQ14432 1141 aa13.3□□□□□ -0.28
THBS3-206ENST00000469769 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
THBS3-206ENST00000469769 BCL2L13Q9BXK5 485 aa13.3□□□□□ -0.28
THBS3-206ENST00000469769 STK31Q9BXU1 1019 aa13.3□□□□□ -0.28
THBS3-206ENST00000469769 PTPRCP08575 1304 aa13.3□□□□□ -0.28
THBS3-206ENST00000469769 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
THBS3-206ENST00000469769 STARD3NLO95772 234 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 ITPK1Q13572 414 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 NBPF10Q6P3W6 841 aaKnown RBP13.29□□□□□ -0.28
THBS3-206ENST00000469769 ATF7IPQ6VMQ6 1270 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
THBS3-206ENST00000469769 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
THBS3-206ENST00000469769 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
THBS3-206ENST00000469769 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
THBS3-206ENST00000469769 TRIM27P14373 513 aa13.28□□□□□ -0.28
THBS3-206ENST00000469769 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
THBS3-206ENST00000469769 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
THBS3-206ENST00000469769 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
THBS3-206ENST00000469769 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
THBS3-206ENST00000469769 ZKSCAN2Q63HK3 967 aa13.28□□□□□ -0.28
THBS3-206ENST00000469769 G2E3Q7L622 706 aa13.28□□□□□ -0.28
THBS3-206ENST00000469769 PLIN1O60240 522 aa13.27□□□□□ -0.29
THBS3-206ENST00000469769 A1BGP04217 495 aa13.27□□□□□ -0.29
THBS3-206ENST00000469769 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
THBS3-206ENST00000469769 FLIIQ13045 1269 aa13.27□□□□□ -0.29
THBS3-206ENST00000469769 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
THBS3-206ENST00000469769 PROM2Q8N271 834 aa13.27□□□□□ -0.29
THBS3-206ENST00000469769 ABCC4O15439 1325 aa13.26□□□□□ -0.29
THBS3-206ENST00000469769 MS4A1P11836 297 aa13.26□□□□□ -0.29
THBS3-206ENST00000469769 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
THBS3-206ENST00000469769 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
THBS3-206ENST00000469769 CNTNAP4Q9C0A0 1308 aa13.26□□□□□ -0.29
THBS3-206ENST00000469769 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
THBS3-206ENST00000469769 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
THBS3-206ENST00000469769 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
THBS3-206ENST00000469769 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
THBS3-206ENST00000469769 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
THBS3-206ENST00000469769 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
THBS3-206ENST00000469769 ANXA1P04083 346 aa13.24□□□□□ -0.29
THBS3-206ENST00000469769 RLBP1P12271 317 aa13.24□□□□□ -0.29
THBS3-206ENST00000469769 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
THBS3-206ENST00000469769 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
THBS3-206ENST00000469769 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
THBS3-206ENST00000469769 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
THBS3-206ENST00000469769 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
THBS3-206ENST00000469769 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
THBS3-206ENST00000469769 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
THBS3-206ENST00000469769 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 APBA3O96018 575 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 INTS3Q68E01 1043 aaKnown RBP13.23□□□□□ -0.29
THBS3-206ENST00000469769 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
THBS3-206ENST00000469769 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
THBS3-206ENST00000469769 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
THBS3-206ENST00000469769 ADCY9O60503 1353 aa13.22□□□□□ -0.29
THBS3-206ENST00000469769 RGL2O15211 777 aa13.22□□□□□ -0.29
THBS3-206ENST00000469769 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
THBS3-206ENST00000469769 CAMKK2Q96RR4 588 aa13.22□□□□□ -0.29
THBS3-206ENST00000469769 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
THBS3-206ENST00000469769 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
THBS3-206ENST00000469769 MYL6BP14649 208 aa13.21□□□□□ -0.29
THBS3-206ENST00000469769 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
THBS3-206ENST00000469769 PLBD2Q8NHP8 589 aa13.21□□□□□ -0.29
THBS3-206ENST00000469769 NUP188Q5SRE5 1749 aa13.21□□□□□ -0.3
THBS3-206ENST00000469769 PI4KAP2A4QPH2 592 aa13.2□□□□□ -0.3
THBS3-206ENST00000469769 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
THBS3-206ENST00000469769 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
THBS3-206ENST00000469769 KCNQ4P56696 695 aa13.2□□□□□ -0.3
THBS3-206ENST00000469769 MVPQ14764 893 aaKnown RBP13.2□□□□□ -0.3
THBS3-206ENST00000469769 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
THBS3-206ENST00000469769 PI4KAP1Q8N8J0 262 aa13.2□□□□□ -0.3
THBS3-206ENST00000469769 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
THBS3-206ENST00000469769 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
THBS3-206ENST00000469769 ERVV-1B6SEH8 477 aa13.19□□□□□ -0.3
THBS3-206ENST00000469769 F6X3S4 739 aa13.19□□□□□ -0.3
THBS3-206ENST00000469769 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
THBS3-206ENST00000469769 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
THBS3-206ENST00000469769 AAMPQ13685 434 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms