RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 RTF1Q92541 710 aaKnown RBP9.51□□□□□ -0.89
TPM3-215ENST00000469717 GLI2P10070 1586 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 CD163L1Q9NR16 1453 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 MROH1Q8NDA8 1641 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
TPM3-215ENST00000469717 LIG1P18858 919 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
TPM3-215ENST00000469717 AK2P54819 239 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 REREQ9P2R6 1566 aa9.51□□□□□ -0.89
TPM3-215ENST00000469717 VPS37CA5D8V6 355 aaPredicted RBP9.5□□□□□ -0.89
TPM3-215ENST00000469717 KMT5BQ4FZB7 885 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 RUFY3Q7L099 469 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 NECTIN2Q92692 538 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 A0A087WWV3 80 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 F13A1P00488 732 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 CCDC144BQ3MJ40 725 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 CCDC83Q8IWF9 413 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 KIF18AQ8NI77 898 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 FEZ1Q99689 392 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 TERF2IPQ9NYB0 399 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 MCM2P49736 904 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 NUTM1Q86Y26 1132 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
TPM3-215ENST00000469717 MCCP23508 829 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 TERF2Q15554 542 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 TMEM87AQ8NBN3 555 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 ZNF215Q9UL58 517 aaPredicted RBP9.49□□□□□ -0.89
TPM3-215ENST00000469717 RIMS2Q9UQ26 1411 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 CACTINQ8WUQ7 758 aaKnown RBP9.49□□□□□ -0.89
TPM3-215ENST00000469717 SPG7Q9UQ90 795 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 ADGRB3O60242 1522 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 NME9Q86XW9 330 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 CERS3Q8IU89 383 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 NECAB1Q8N987 351 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 MRVI1Q9Y6F6 885 aa9.49□□□□□ -0.89
TPM3-215ENST00000469717 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
TPM3-215ENST00000469717 WAPLQ7Z5K2 1190 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 CCDC112Q8NEF3 446 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 TRMT1Q9NXH9 659 aaKnown RBP9.48□□□□□ -0.89
TPM3-215ENST00000469717 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 YEATS2Q9ULM3 1422 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 CHD1O14646 1710 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 EFCAB6Q5THR3 1501 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 CAPN2P17655 700 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 IL13P35225 146 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 ELF2Q15723 593 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 TPD52L1Q16890 204 aaPredicted RBP9.48□□□□□ -0.89
TPM3-215ENST00000469717 ANO6Q4KMQ2 910 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 HDGFL2Q7Z4V5 671 aaPredicted RBP9.48□□□□□ -0.89
TPM3-215ENST00000469717 TRIM5Q9C035 493 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 SALL3Q9BXA9 1300 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 DLG5Q8TDM6 1919 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 GJB2P29033 226 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 NPATQ14207 1427 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 FBXO38Q6PIJ6 1188 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 CBX8Q9HC52 389 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 SMC3Q9UQE7 1217 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 CCDC9Q9Y3X0 531 aaKnown RBP9.48□□□□□ -0.89
TPM3-215ENST00000469717 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
TPM3-215ENST00000469717 RBM6P78332 1123 aaKnown RBP9.47□□□□□ -0.89
TPM3-215ENST00000469717 TYRO3Q06418 890 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 LRRN4CLQ8ND94 238 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 ZBTB9Q96C00 473 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
TPM3-215ENST00000469717 SNX14Q9Y5W7 946 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 SMTNL1A8MU46 457 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 PPLO60437 1756 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 CCDC192P0DO97 292 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 CSB-PGBD3P0DP91 1061 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 TCEANC2Q96MN5 208 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 LRRCC1Q9C099 1032 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 ABCC3O15438 1527 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 GABPB1Q06547 395 aaPredicted RBP9.47□□□□□ -0.89
TPM3-215ENST00000469717 ST3GAL1Q11201 340 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 ADCK5Q3MIX3 580 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 FAM200AQ8TCP9 573 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
TPM3-215ENST00000469717 MORC2Q9Y6X9 1032 aaPredicted RBP9.47□□□□□ -0.89
TPM3-215ENST00000469717 HSPA4P34932 840 aa9.46□□□□□ -0.89
TPM3-215ENST00000469717 DNAJC25Q9H1X3 360 aa9.46□□□□□ -0.89
TPM3-215ENST00000469717 DACT1Q9NYF0 836 aa9.46□□□□□ -0.89
TPM3-215ENST00000469717 MAP2P11137 1827 aaKnown RBP9.46□□□□□ -0.89
TPM3-215ENST00000469717 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
TPM3-215ENST00000469717 CASTP20810 708 aaKnown RBP9.46□□□□□ -0.9
TPM3-215ENST00000469717 PROSER2Q86WR7 435 aaPredicted RBP9.46□□□□□ -0.9
TPM3-215ENST00000469717 TTC14Q96N46 770 aa9.46□□□□□ -0.9
TPM3-215ENST00000469717 ZNF446Q9NWS9 450 aa9.46□□□□□ -0.9
TPM3-215ENST00000469717 ANAPC15P60006 121 aa9.46□□□□□ -0.9
TPM3-215ENST00000469717 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.9
TPM3-215ENST00000469717 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
TPM3-215ENST00000469717 ERBB3P21860 1342 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms